rna4816, rna4816 (mRNA) Nannochloropsis gaditana

Overview
Namerna4816
Unique Namerna4816
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1664
Alignment locationCM002464.1:436415..437624 -

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Properties
Property NameValue
ProductCyclin
Orig transcript idgnl|cribi|Naga_100054g27.5555.mrna
Orig protein idgnl|cribi|Naga_100054g27.5555
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:436415..437624 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100054g27gene4652Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4816rna4816-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25863.1cds4804Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4816 ID=rna4816|Name=rna4816|organism=Nannochloropsis gaditana|type=mRNA|length=1664bp
TTCGCTGCTTCCAGGCATTTGGCGACTTCATGGAACCCACATTTGTAGAA
ATGTCAAGAGGGGCTGGCTTGATTTATGATACAGGTGGGTATGATACGGT
TGCATCTCGCACTGTGAGATCGCGGCATGCGTGTTCATTTCTCCGTCTGA
CTCCGAGCAGGAAGGGGCTTGAATTGAACGAGAAGCCAAGTATCTTACAT
ATCAAATTGATCGCTGTGCGTCCCATCGCTTGAAAGCGTAGCTTCGACAG
TCATATACATTTGATGTGTACATATATACACTTTCACTGAACAGGCAGCA
GAGAAGTTGTATGTGGGTGGGTGACACTTTCCGAACGCGAGGCAATAAAA
TACAAGCGGTAATATGGACACACAAAGAATAGACACGGCGAGTGATCATG
CTCAGAAAACCCTATCAGGAGGTGACGGGGCAGCGAGCGCGAAGCAACCC
AGCGTTGTCAGGCATGATGGTCCTCTTGTATGTATAGACCGTGGCCAATC
TGCTCTTCCCGAGCAAGGCTACGACTTTTTAATGGAGACGCTTGGATGTG
ATTTGGGGAGCGAGCTCCTGGGGTCCAGCAAGGAGGAGTACGGGGCACGA
TGGCTGAGAGAAGTACGATTGCGCTTTCAAGAGCGGAGATACGAGAAGAC
TTGGGAGACGTTTTTGGAGAATGGGGGCAAGTGCGGCGGGCGGTGCACAT
ACTGGGCCATCCTGCAGGTTCCTTCGGACAGATCATTTGACCTTCACGTC
CACCCGTGCTTTGAGGTCCTCCACGTCCTTCGCGGAAGGCTTTACGAGAG
GCGCATGCTCGGCCCCCCTCTATCCCTAGCAGAGGAGGAAGGCAAGCCAG
TTCGGGAGATGGCGCCTGTGGACCTATCTGGGCTGTGCCCGCCTCCCGAC
TTCCGGGATGGTGTCTTCCAGGAGGACACGATCAACGTGAACGAGATGGG
CAGCGTCCATCAAAGCTGGACAGGCGAGGAGGGCTGCATCATTTTACTAC
TATGGGCCGGAGGGCATTGCTTTATTGATGGGGCTTGTTTGCCGCAGGGC
TATGAAAAGGGTGGATGCTGTACAGAGAGCGTGAAGGATTGAAATTTCCC
CGTCTGAATCTGGTACCCGGCTTGCGATGTAGCGGGACAAGGGTGAAAAC
GGGCGAAATGCAAAAAATGAAGCAAAGCGAAGCAAACTTTGACGATCTCC
ATCCTTTTTGGGGGGGGAGCCCTATGTCGTCTTATAGGAGGGCGCATTTC
CTTCCTGCGTCCTAAAAATAAAATGCAACGGACGACTTTACAGCAAACTC
AGTTGGACGCTCAGACATCGAACTGTCGTCAAAGACAGTCTAGAAGGCGT
TGGGCATGTCGGGCAGGCTCTGTGGGCCGCTTTGTCCACTTCCCCCTTCC
TCCCCTTCCTATCCCCCCCCCTTTACACCACTCCCGTCAACTCCAGAGAT
GAGACCATCATGAACTTAGCCGCTCCGTACTTCTTGCGGATGGCCTGCAG
GGTCTGGGACCTGGAGTTCAGCCACGGTGAAAGGACGCGCAGGCAAGGAA
GGAGAGCGTCCTCGCTGTACTTGGTGTAGTGGTTCAAGGTGGGCGACCAG
GATCGCATTCCGCAGTTTTTCCGTGCCAGGTAAACGGCGGCGGCGGCGAC
CATGGAGGGCAGGA
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protein sequence of rna4816

>rna4816-protein ID=rna4816-protein|Name=rna4816|organism=Nannochloropsis gaditana|type=polypeptide|length=336bp
MDGKRREEAVDDMDLIQEVEEIDMHIEEASEMPQEAIQAESQEALGAIIE
DLQGMTLKYSTARPVLGLGVDDIDALDASNPLACVDYVESQYSHYREKEC
RPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDR
FLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQI
IDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQ
EVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRV
LSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTGVV
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mRNA from alignment at CM002464.1:436415..437624-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4816 ID=rna4816|Name=rna4816|organism=Nannochloropsis gaditana|type=mRNA|length=1210bp|location=Sequence derived from alignment at CM002464.1:436415..437624- (Nannochloropsis gaditana)
ATGGACGGCAAACGGCGGGAAGAAGCAGTGGATGACATGGACTTAATTCA
GGAGGTAGAAGAAATCGACATGCACATCGAGGAGGCTTCAGAGATGGTGA
GTACGCAAAAGTGACCGAGGTGGGAGCCGTGCGTATGGTATATGGATGGG
AAAATATACGGAACATGTGGACGAGTGAATGCTAACGCAAATTATCGTCG
TCCTGACAGCCTCAGGAAGCAATCCAGGCGGAGTCCCAGGAGGCTCTGGG
CGCCATCATCGAGGACCTCCAGGGCATGACCCTCAAGTATTCCACTGCGC
GGGTACGTGAACTTGTGCAGACTTTCCCTTGTGGACTATAAGCTCACCCT
TGGACTGTCTACCTTCCCTCTCTCATCCTCTTCCGCAGCCCGTACTGGGC
CTGGGGGTGGACGACATCGACGCGTTGGATGCCTCCAACCCCCTGGCCTG
TGTGGACTACGTCGAGTCTCAGTACTCGCACTACCGGGAAAAGGAGTGCC
GCCCAGGCTATGACCCGGGCTACATGAAGAAGCAGCCTTACATAAATGTA
CGGATGCGCGCCATCCTGGTTGACTGGCTGGTGGAGGTACACTACAAATT
CAAGTGCTGTCCCGAGACGCTCTACCTCACGGTCAATCTCATCGACCGCT
TCCTGGACCGGAAGCAGGTGCCTCGGCCCAAGCTCCAGCTCGTGGGGGTG
ACCGCCTTTCTGATCGCCTGCAAATACGAAGAGATCTACCCCCCGGAGGT
GAAGGAGCTAGTCTACATGACTGACGCCGCCTATACGCGGAAGCAGATCA
TCGATATGGAGGCCTTCATGCTGGCCACGCTCAAGTTTCAGGTCACAGTC
TGCACCACCCACTGCTTCCTGGTCCGCTTCCTCAAGGCGGGCCACGCGGA
CAACAAGCTCTACTTCCTCGCCTCCTACATCGCGGAGCGCACACTGCAAG
AGGTGGACGTCCTCTGCTTCCTGCCCTCCATGGTCGCCGCCGCCGCCGTT
TACCTGGCACGGAAAAACTGCGGAATGCGATCCTGGTCGCCCACCTTGAA
CCACTACACCAAGTACAGCGAGGACGCTCTCCTTCCTTGCCTGCGCGTCC
TTTCACCGTGGCTGAACTCCAGGTCCCAGACCCTGCAGGCCATCCGCAAG
AAGTACGGAGCGGCTAAGTTCATGATGGTCTCATCTCTGGAGTTGACGGG
AGTGGTGTAA
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Coding sequence (CDS) from alignment at CM002464.1:436415..437624-

>rna4816 ID=rna4816|Name=rna4816|organism=Nannochloropsis gaditana|type=CDS|length=3033bp|location=Sequence derived from alignment at CM002464.1:436415..437624- (Nannochloropsis gaditana)
CCCGTACTGGGCCTGGGGGTGGACGACATCGACGCGTTGGATGCCTCCAA
CCCCCTGGCCTGTGTGGACTACGTCGAGTCTCAGTACTCGCACTACCGGG
AAAAGGAGTGCCGCCCAGGCTATGACCCGGGCTACATGAAGAAGCAGCCT
TACATAAATGTACGGATGCGCGCCATCCTGGTTGACTGGCTGGTGGAGGT
ACACTACAAATTCAAGTGCTGTCCCGAGACGCTCTACCTCACGGTCAATC
TCATCGACCGCTTCCTGGACCGGAAGCAGGTGCCTCGGCCCAAGCTCCAG
CTCGTGGGGGTGACCGCCTTTCTGATCGCCTGCAAATACGAAGAGATCTA
CCCCCCGGAGGTGAAGGAGCTAGTCTACATGACTGACGCCGCCTATACGC
GGAAGCAGATCATCGATATGGAGGCCTTCATGCTGGCCACGCTCAAGTTT
CAGGTCACAGTCTGCACCACCCACTGCTTCCTGGTCCGCTTCCTCAAGGC
GGGCCACGCGGACAACAAGCTCTACTTCCTCGCCTCCTACATCGCGGAGC
GCACACTGCAAGAGGTGGACGTCCTCTGCTTCCTGCCCTCCATGGTCGCC
GCCGCCGCCGTTTACCTGGCACGGAAAAACTGCGGAATGCGATCCTGGTC
GCCCACCTTGAACCACTACACCAAGTACAGCGAGGACGCTCTCCTTCCTT
GCCTGCGCGTCCTTTCACCGTGGCTGAACTCCAGGTCCCAGACCCTGCAG
GCCATCCGCAAGAAGTACGGAGCGGCTAAGTTCATGATGGTCTCATCTCT
GGAGTTGACGGGAGTGGTGTAACCTCAGGAAGCAATCCAGGCGGAGTCCC
AGGAGGCTCTGGGCGCCATCATCGAGGACCTCCAGGGCATGACCCTCAAG
TATTCCACTGCGCGGATGGACGGCAAACGGCGGGAAGAAGCAGTGGATGA
CATGGACTTAATTCAGGAGGTAGAAGAAATCGACATGCACATCGAGGAGG
CTTCAGAGATGCCCGTACTGGGCCTGGGGGTGGACGACATCGACGCGTTG
GATGCCTCCAACCCCCTGGCCTGTGTGGACTACGTCGAGTCTCAGTACTC
GCACTACCGGGAAAAGGAGTGCCGCCCAGGCTATGACCCGGGCTACATGA
AGAAGCAGCCTTACATAAATGTACGGATGCGCGCCATCCTGGTTGACTGG
CTGGTGGAGGTACACTACAAATTCAAGTGCTGTCCCGAGACGCTCTACCT
CACGGTCAATCTCATCGACCGCTTCCTGGACCGGAAGCAGGTGCCTCGGC
CCAAGCTCCAGCTCGTGGGGGTGACCGCCTTTCTGATCGCCTGCAAATAC
GAAGAGATCTACCCCCCGGAGGTGAAGGAGCTAGTCTACATGACTGACGC
CGCCTATACGCGGAAGCAGATCATCGATATGGAGGCCTTCATGCTGGCCA
CGCTCAAGTTTCAGGTCACAGTCTGCACCACCCACTGCTTCCTGGTCCGC
TTCCTCAAGGCGGGCCACGCGGACAACAAGCTCTACTTCCTCGCCTCCTA
CATCGCGGAGCGCACACTGCAAGAGGTGGACGTCCTCTGCTTCCTGCCCT
CCATGGTCGCCGCCGCCGCCGTTTACCTGGCACGGAAAAACTGCGGAATG
CGATCCTGGTCGCCCACCTTGAACCACTACACCAAGTACAGCGAGGACGC
TCTCCTTCCTTGCCTGCGCGTCCTTTCACCGTGGCTGAACTCCAGGTCCC
AGACCCTGCAGGCCATCCGCAAGAAGTACGGAGCGGCTAAGTTCATGATG
GTCTCATCTCTGGAGTTGACGGGAGTGGTGTAACCTCAGGAAGCAATCCA
GGCGGAGTCCCAGGAGGCTCTGGGCGCCATCATCGAGGACCTCCAGGGCA
TGACCCTCAAGTATTCCACTGCGCGGATGGACGGCAAACGGCGGGAAGAA
GCAGTGGATGACATGGACTTAATTCAGGAGGTAGAAGAAATCGACATGCA
CATCGAGGAGGCTTCAGAGATGCCCGTACTGGGCCTGGGGGTGGACGACA
TCGACGCGTTGGATGCCTCCAACCCCCTGGCCTGTGTGGACTACGTCGAG
TCTCAGTACTCGCACTACCGGGAAAAGGAGTGCCGCCCAGGCTATGACCC
GGGCTACATGAAGAAGCAGCCTTACATAAATGTACGGATGCGCGCCATCC
TGGTTGACTGGCTGGTGGAGGTACACTACAAATTCAAGTGCTGTCCCGAG
ACGCTCTACCTCACGGTCAATCTCATCGACCGCTTCCTGGACCGGAAGCA
GGTGCCTCGGCCCAAGCTCCAGCTCGTGGGGGTGACCGCCTTTCTGATCG
CCTGCAAATACGAAGAGATCTACCCCCCGGAGGTGAAGGAGCTAGTCTAC
ATGACTGACGCCGCCTATACGCGGAAGCAGATCATCGATATGGAGGCCTT
CATGCTGGCCACGCTCAAGTTTCAGGTCACAGTCTGCACCACCCACTGCT
TCCTGGTCCGCTTCCTCAAGGCGGGCCACGCGGACAACAAGCTCTACTTC
CTCGCCTCCTACATCGCGGAGCGCACACTGCAAGAGGTGGACGTCCTCTG
CTTCCTGCCCTCCATGGTCGCCGCCGCCGCCGTTTACCTGGCACGGAAAA
ACTGCGGAATGCGATCCTGGTCGCCCACCTTGAACCACTACACCAAGTAC
AGCGAGGACGCTCTCCTTCCTTGCCTGCGCGTCCTTTCACCGTGGCTGAA
CTCCAGGTCCCAGACCCTGCAGGCCATCCGCAAGAAGTACGGAGCGGCTA
AGTTCATGATGGTCTCATCTCTGGAGTTGACGGGAGTGGTGTAACCTCAG
GAAGCAATCCAGGCGGAGTCCCAGGAGGCTCTGGGCGCCATCATCGAGGA
CCTCCAGGGCATGACCCTCAAGTATTCCACTGCGCGGATGGACGGCAAAC
GGCGGGAAGAAGCAGTGGATGACATGGACTTAATTCAGGAGGTAGAAGAA
ATCGACATGCACATCGAGGAGGCTTCAGAGATG
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Synonyms
Publications