EWM25863.1, cds4804 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25863.1 vs. NCBI_GenBank
Match: gi|585107731|gb|EWM25863.1| (Cyclin [Nannochloropsis gaditana]) HSP 1 Score: 699.123 bits (1803), Expect = 0.000e+0 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0 Query: 1 MDGKRREEAVDDMDLIQEVEEIDMHIEEASEMPQEAIQAESQEALGAIIEDLQGMTLKYSTARPVLGLGVDDIDALDASNPLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTGVV 336 MDGKRREEAVDDMDLIQEVEEIDMHIEEASEMPQEAIQAESQEALGAIIEDLQGMTLKYSTARPVLGLGVDDIDALDASNPLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTGVV Sbjct: 1 MDGKRREEAVDDMDLIQEVEEIDMHIEEASEMPQEAIQAESQEALGAIIEDLQGMTLKYSTARPVLGLGVDDIDALDASNPLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTGVV 336
BLAST of EWM25863.1 vs. NCBI_GenBank
Match: gi|553195305|ref|XP_005856122.1| (cyclin B [Nannochloropsis gaditana CCMP526] >gi|422292957|gb|EKU20258.1| cyclin B [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0 Query: 24 MHIEEASEMPQEAIQAESQEALGAIIEDLQGMTLKYSTARPVLGLGVDDIDALDASNPLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTGVV 336 MHIEEASEMPQEAIQAESQEALGAIIEDLQGMTLKYSTARPVLGLGVDDIDALDASNPLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTGVV Sbjct: 1 MHIEEASEMPQEAIQAESQEALGAIIEDLQGMTLKYSTARPVLGLGVDDIDALDASNPLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTGVV 313
BLAST of EWM25863.1 vs. NCBI_GenBank
Match: gi|676380439|ref|XP_009033498.1| (hypothetical protein AURANDRAFT_12473, partial [Aureococcus anophagefferens] >gi|323456613|gb|EGB12480.1| hypothetical protein AURANDRAFT_12473, partial [Aureococcus anophagefferens]) HSP 1 Score: 314.309 bits (804), Expect = 6.849e-104 Identity = 148/261 (56.70%), Postives = 195/261 (74.71%), Query Frame = 0 Query: 72 DIDALDASNPLACVDYVESQ----YSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVS 328 D+DA DASNP A +YV Y+H+REKE +P YM +Q +IN +MRAIL+DWLVEVH KFK PETLYLTVNLIDR+L V R LQLVGV+A L+A KYEEIYPPE+K+LVY+TD AYT++QI+ ME M+ LK+++T+ + HCF++R+LKAGHAD ++ +LASY+AER LQE +L +LPSMVAA AVY+ARKN G +WSPTL HY +Y+E +L CL +S ++S +LQA++KKY + K+ V+ Sbjct: 1 DVDARDASNPQAVTEYVNDMRAPAYAHFREKELETSVNPTYMSRQAHINEKMRAILIDWLVEVHLKFKLVPETLYLTVNLIDRYLLGSPVERSNLQLVGVSALLLASKYEEIYPPELKDLVYITDKAYTQEQILSMEEKMVKALKYKMTIASIHCFMMRYLKAGHADRRMVWLASYVAERMLQEYAMLKYLPSMVAACAVYIARKNLGRNAWSPTLLHYAQYTESSLRACLEEMSSVIHSTKGSLQAVKKKYSSEKYGQVA 261
BLAST of EWM25863.1 vs. NCBI_GenBank
Match: gi|1072231754|gb|OEU16486.1| (Cyclin_N-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 293.893 bits (751), Expect = 1.006e-95 Identity = 139/264 (52.65%), Postives = 191/264 (72.35%), Query Frame = 0 Query: 71 DDIDALDASNPLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTG 334 D+ID DA +PL +YV+ Y H+R KE P YM Q +IN RMR+ILVDWLVEVH KFK PETLYLT+NLIDR+L+R++V RP+LQLVGVT+ LIA KYEEIYPPE+++LVY+ D AYTR +II+ME +L TL++ +T+ + H FLVRFLKA HAD ++ L+ YI + TLQ ++L +LPS +AAAAV++AR+ G SWSPTL Y KY E+ ++P + + + +Q L+A+ KKY ++++ V+SL L+ Sbjct: 5 DNIDERDAEDPLCATEYVQDMYEHFRLKEGSTSVRPLYMDNQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRTEIIEMEEKILKTLEYNITIPSAHAFLVRFLKAAHADKRIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLKYAKYREEDIMPIAKAVMNEKANAAQELRAVNKKYTSSRYGGVASLTLSN 268
BLAST of EWM25863.1 vs. NCBI_GenBank
Match: gi|298710321|emb|CBJ31941.1| (cyclin B2 [Ectocarpus siliculosus]) HSP 1 Score: 292.352 bits (747), Expect = 3.790e-93 Identity = 140/262 (53.44%), Postives = 188/262 (71.76%), Query Frame = 0 Query: 72 DIDALDASNPLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELT 333 DID DA PLA +YVE Y RE+E D GYM QP +N RMR+IL+DWLVEVH KFK P+TLYLTV LID++L+ + V R LQLVGVTA L+A KYEEIYPP++++LV++TD AY R QI++ME+ M L+F++TV T +CFL+R+LKA HAD K+ L+ Y+AER LQEV +L +LPS+VA A+Y+ARKN G WSPTL YTKY + L+PCL +S L L+A++KK+ ++KF V+++++ Sbjct: 145 DIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVSMLDYLPSVVACCAIYVARKNMGRTCWSPTLEKYTKYRVEDLMPCLGEISRVLKQEGGDLEAVKKKFSSSKFGSVATMKVN 406
BLAST of EWM25863.1 vs. NCBI_GenBank
Match: gi|1210514084|dbj|GAX26866.1| (cyclin B [Fistulifera solaris]) HSP 1 Score: 281.567 bits (719), Expect = 2.279e-89 Identity = 132/254 (51.97%), Postives = 183/254 (72.05%), Query Frame = 0 Query: 81 PLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTG 334 PL YV Y H+REKE P YM+ Q +IN RMR+ILVDWLVEVH KFK PETLYLT+N+IDRFL++++V RP+LQLVGVT+ LIA KYEEI+PPE+++LVY+ D AYT++ I+ ME +L TL++ VT+ + H FLVRFLKAGHAD K+ L+ YI + TLQ ++L +LPS +AAAAV++AR+ G WSPTL Y Y E+ ++P R + ++ S+ L+A+ KKY ++++ V++ EL+ Sbjct: 122 PLCTTSYVNDMYVHFREKEVFSSVRPIYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINMIDRFLEKERVSRPRLQLVGVTSLLIASKYEEIFPPELRDLVYICDKAYTKQDILQMEELILKTLEYNVTIPSAHAFLVRFLKAGHADKKIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRVVGRNPWSPTLLKYANYCEEEVIPVARAILREKSTASEELKAVNKKYSSSRYGGVAAYELSA 375
BLAST of EWM25863.1 vs. NCBI_GenBank
Match: gi|1210520866|dbj|GAX20429.1| (cyclin B [Fistulifera solaris]) HSP 1 Score: 281.182 bits (718), Expect = 3.367e-89 Identity = 132/254 (51.97%), Postives = 182/254 (71.65%), Query Frame = 0 Query: 81 PLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTG 334 PL YV Y H+REKE P YM+ Q +IN RMR+ILVDWLVEVH KFK PETLYLT+N+IDRFL++++V RP+LQLVGVT+ LIA KYEEI+PPE+++LVY+ D AYT++ I+ ME +L TL++ VT+ + H FLVRFLKAGHAD K+ L+ YI + TLQ ++L +LPS +AAAAV++AR+ G WSPTL Y Y E+ ++P R + ++ S L+A+ KKY ++++ V++ EL+ Sbjct: 122 PLCTTSYVNDMYVHFREKEVFSSVRPIYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINMIDRFLEKERVSRPRLQLVGVTSLLIASKYEEIFPPELRDLVYICDKAYTKQDILQMEELILKTLEYNVTIPSAHAFLVRFLKAGHADKKIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRVVGRNPWSPTLLKYANYCEEEVIPVARAILREKSTASDELKAVNKKYSSSRYGGVAAYELSA 375
BLAST of EWM25863.1 vs. NCBI_GenBank
Match: gi|219119266|ref|XP_002180397.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407870|gb|EEC47805.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 278.485 bits (711), Expect = 3.911e-89 Identity = 141/266 (53.01%), Postives = 186/266 (69.92%), Query Frame = 0 Query: 69 GVDDIDALD--ASNPLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLEL 332 VDDIDA D A + L YV+ Y+++REKE P YM+ QP+IN RMR+ILVDWLVEVH KFK PETLYLTVN+IDRFL +V RPKLQLVGVT+ LIA KYEEIYPPE+++LVY+ D AYTR II+ME +L TL +Q+T+ + H FLVR+LKAGHAD ++ L+ YI + TLQ D+L +LPS +AAAAV++AR+ G +WSPTL Y +Y E+ ++ R + + + L+A+ KKY ++ V+S L Sbjct: 34 NVDDIDARDETAGDVLCVTSYVQGMYTYFREKEVTTAVLPVYMESQPHINERMRSILVDWLVEVHLKFKLVPETLYLTVNIIDRFLQIHKVSRPKLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRPDIIEMEECILKTLGYQITIPSAHAFLVRYLKAGHADKRIVQLSCYILDSTLQSYDLLRYLPSQLAAAAVFIARRTVGRNAWSPTLLRYAEYCEEEIITVARDVLREKSIANPELRAVNKKYSGHRYGGVASTVL 299
BLAST of EWM25863.1 vs. NCBI_GenBank
Match: gi|223999181|ref|XP_002289263.1| (hypothetical protein THAPSDRAFT_33883 [Thalassiosira pseudonana CCMP1335] >gi|220974471|gb|EED92800.1| hypothetical protein THAPSDRAFT_33883 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 275.789 bits (704), Expect = 2.022e-88 Identity = 128/254 (50.39%), Postives = 183/254 (72.05%), Query Frame = 0 Query: 81 PLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELTG 334 PL YV+ Y H+R KE P YM+ Q +IN RMR+ILVDWLVEVH KFK PETLYLTVN+IDR+L + +V RPKLQLVGVTA LIA KYEEIYPPE+++LVY+ D AY++ +I++ME +L +L++Q+T+ + H FLVR+LKA HAD K+ L+ +I + TLQ ++L +LPS +AAAAV++AR+ G +WSPTL Y +Y E+ ++P R + +S S L+A+ KKY ++++ V+++ ++ Sbjct: 26 PLCATSYVQDMYEHFRGKEVFTSVRPVYMEDQQFINERMRSILVDWLVEVHLKFKLVPETLYLTVNVIDRYLAKTEVSRPKLQLVGVTALLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEIILKSLEYQITIPSAHAFLVRYLKAAHADKKIVQLSCFILDGTLQSYNMLHYLPSQLAAAAVFIARRTVGRNAWSPTLLKYAQYREEDIMPVARAVLAEKSSSSTELRAVNKKYTSSRYGGVANISISS 279
BLAST of EWM25863.1 vs. NCBI_GenBank
Match: gi|508705561|gb|EOX97457.1| (Cyclin b2,4 isoform 2 [Theobroma cacao]) HSP 1 Score: 250.366 bits (638), Expect = 3.105e-78 Identity = 131/280 (46.79%), Postives = 186/280 (66.43%), Query Frame = 0 Query: 47 AIIEDLQGMTLKYSTARPVLGLGVDDIDALDASNPLACVDYVESQYSHYREKECRPGYDPGYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDRKQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKN-CGMRSWSPTLNHYTKYSEDALLPCLRVLSPW-LNSRSQTLQAIRKKYGAAKF 324 A++++ GM + + DID D+ +PLA V+YV+ Y++YRE E P YM +Q IN +MRAIL+DWLVEVHYKF+ ETL+LT+NLIDRFL+R V R KLQLVG+TA L+ACKYEE+ P V++ V ++D AYTRK ++DME M+ TL+F ++V T + F+ RFLKA +D KL FL+ ++ E L E ++L F PS++AAAA+Y A+ + C ++WS T +TKYSED LL C +++ + + S L + +KY A KF Sbjct: 11 AVLDETDGMEFEMEDVED----SIIDIDRNDSKDPLAVVEYVDDIYAYYRETEVSYCVSPNYMDRQFDINEKMRAILIDWLVEVHYKFQLMDETLFLTINLIDRFLERCTVIRKKLQLVGMTAMLLACKYEEVSVPLVEDFVLISDKAYTRKDVLDMEKLMVNTLQFSMSVPTPYVFIRRFLKAAQSDKKLEFLSFFLIELCLVEYEMLKFPPSLLAAAAIYTAQCSICRFKNWSKTSECHTKYSEDQLLECSKLMVTYHQKAGSGNLTGVHRKYSAYKF 286 The following BLAST results are available for this feature:
BLAST of EWM25863.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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