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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100054g26.5575.mrna |
| Orig protein id | gnl|cribi|Naga_100054g26.5575 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:434993..436656 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4815 ID=rna4815|Name=rna4815|organism=Nannochloropsis gaditana|type=mRNA|length=1907bp
GATACTTGGCTTCTCGTTCAATTCAAGCCCCTTCCTGCTCGGAGTCAGAC
GGAGAAATGAACACGCATGCCGCGATCTCACAGTGCGAGATGCAACCGTA
TCATACCCACCTGTATCATAAATCAAGCCAGCCCCTCTTGACATTTCTAC
AAATGTGGGTTCCATGAAGTCGCCAAATGCCTGGAAGCAGCGAAGAGCAT
CTCCTACGCCCCACCCCATCGTGTCCCGCGACAAATTCCTGAAAATCCAC
GTATGGACGCAAGCTTGACACTGAGTACTTTGATTTCCATTCATATCGCA
GGAGGAAGCAAAAAATATGTTGCACAACGTTGCGTCGTTGTCGAGAACAG
TGAGCTGCTTCTGCCTTCTGGTGGCCTCCGCACAGGCTTTCCTCCTTCAA
TTTAGCGCTAGCCCCTTTGGACGCACCAAGGCATTGGTGAGTGATGAATC
GGGCTTCTTACCGCGTGCACATTTGACGCTATGATGTATTACACCATCCA
TGCAGACGACCTGTGATCTCAACCCTCGACGAGGTCGTACAACGACCTTG
TCCGCCGCCAGAGGGGGGTCATCGGTGCCCAGCGCGAGGGTCGGCATTTT
GGGTGCTTCTGGGTACACGGGTGCGGAATTGATGCGCATCCTTCTGCAGC
ATCCATATGCCAAAATCAAATACCTTACGGCGGATCGCTCGGCAGGCCTG
GCTTTCAGCGAGGTCTTTCCGCAGTTCAGCTACGTGAAGGATCTCCCCAG
GCTCAGCAAATTCGAGGACATGTCTCCCGAGAAGTGGGGCCAGGAGGTCG
ATGTCATCTTCTGCTGCCTCCCACACGCCACAACCCAGCTGGTGATCGCC
TCGTTGCCGCCCAGCGTTAAGGTGGTGGACCTATCCGCCGACTTCAGGCT
CGCGGACATCGAGGTGTACAAGGAGTGGTACGGGGGCGAGCACAAGGCCC
CCGAGCTCCAGAAAGAGGCCGTCTATGCCATCACAGAGTTTAGCCGAGAT
CAGGTAAAAGCTTGCCGGCTGGTGGCCAATCCTGGCTGCTATCCTACCGC
GGCCCAGCTCCCGCTCGTGCCGCTCCTGCGGAGCGGCCTGGTCTCCCAGG
AAGACATCATCATCGACGCCAAGTCAGGCACGACAGGCGCGGGGCGCTCC
CTGAAGCAGAACATTCTCTACTGCGAAGTAACGGATGGGATCTCTGCCTA
CGGAATCGCTTCCCACCGACACGCTCCCGAGATCGAGCAGGGCCTCCGGG
AGGCGGCAGGCGGCAAGGAGGTGGTCATCAACTTCACGCCGCACTTGATG
CCCATGTCACGCGGGATCCTCGAGTCCATCTACGTGAAAACCGCCCCAGG
TAAGACAGCCGCAGATTTGAAGGCGCACTTGCAGGGTCTGTACGCACAGG
AGCCTTTTGTGCATGTACTGGAGGGCAGCAAGGTGCCCGAAACCCGGCAC
GTGCGGGGAAGCAACCACTGCTTCATCAACGTCTTCGCGGACCGCGTCCC
GGGGCGGGCCATCATCGTCAGCGCGATAGACAACTTGGTTAAGGGGGCCT
CAGGTCAGGCCGTCCAGAACTTCAATGTCATGTTTGGGTACCCGGAGACG
ACCGGTCTCCTCTCTCCGCCCATGTTCCCCTAGTGTCGACCCGACTTTCT
CATGGTCACTGTCTCTCCCAAGCCCGGTGGCTCTAGCCCATCTTCGCCAA
CTCCAACTATTATGTGGAGGCAGCGTACATGATAGCTGCTACTCGAAACG
AGGGCTATCAGAGTCTTTCAAGTCAGAAAGGAAATGGAGCGCACAGAGGA
TTAATCTACGCCAGATCGGCATTTTTGGTGCCTGTATCTCGGAAGAGCAA
AGGAAGCAATTTGCCTCTATAGTTTAAGATGGACAAAATTTCAGTTACCT
TCTGGGT back to topprotein sequence of rna4815 >rna4815-protein ID=rna4815-protein|Name=rna4815|organism=Nannochloropsis gaditana|type=polypeptide|length=242bp
MDTQRIDTASDHAQKTLSGGDGAASAKQPSVVRHDGPLVCIDRGQSALPE
QGYDFLMETLGCDLGSELLGSSKEEYGARWLREVRLRFQERRYEKTWETF
LENGGKCGGRCTYWAILQVPSDRSFDLHVHPCFEVLHVLRGRLYERRMLG
PPLSLAEEEGKPVREMAPVDLSGLCPPPDFRDGVFQEDTINVNEMGSVHQ
SWTGEEGCIILLLWAGGHCFIDGACLPQGYEKGGCCTESVKD back to topmRNA from alignment at CM002464.1:434993..436656+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4815 ID=rna4815|Name=rna4815|organism=Nannochloropsis gaditana|type=mRNA|length=1664bp|location=Sequence derived from alignment at CM002464.1:434993..436656+ (Nannochloropsis gaditana)
TTCGCTGCTTCCAGGCATTTGGCGACTTCATGGAACCCACATTTGTAGAA
ATGTCAAGAGGGGCTGGCTTGATTTATGATACAGGTGGGTATGATACGGT
TGCATCTCGCACTGTGAGATCGCGGCATGCGTGTTCATTTCTCCGTCTGA
CTCCGAGCAGGAAGGGGCTTGAATTGAACGAGAAGCCAAGTATCTTACAT
ATCAAATTGATCGCTGTGCGTCCCATCGCTTGAAAGCGTAGCTTCGACAG
TCATATACATTTGATGTGTACATATATACACTTTCACTGAACAGGCAGCA
GAGAAGTTGTATGTGGGTGGGTGACACTTTCCGAACGCGAGGCAATAAAA
TACAAGCGGTAATATGGACACACAAAGAATAGACACGGCGAGTGATCATG
CTCAGAAAACCCTATCAGGAGGTGACGGGGCAGCGAGCGCGAAGCAACCC
AGCGTTGTCAGGCATGATGGTCCTCTTGTATGTATAGACCGTGGCCAATC
TGCTCTTCCCGAGCAAGGCTACGACTTTTTAATGGAGACGCTTGGATGTG
ATTTGGGGAGCGAGCTCCTGGGGTccagcaaggaggagtacgGGGCACGA
TGGCTGAGAGAAGTACGATTGCGCTTTCAAGAGCGGAGATACGAGAAGAC
TTGGGAGACGTTTTTGGAGAATGGGGGCAAGTGCGGCGGGCGGTGCACAT
ACTGGGCCATCCTGCAGGTTCCTTCGGACAGATCATTTGACCTTCACGTC
CACCCGTGCTTTgaggtcctccacgtccttcgcGGAAGGCTTTACGAGAG
GCGCATGCTCGGCCCCCCTCTATCCctagcagaggaggaaggcaagccAG
TTCGGGAGATGGCGCCTGTGGACCTATCTGGGCTGTGCCCGCCTCCCGAC
TTCCGGGATGGTGTCTTCCAGGAGGACACGATCAACGTGAACGAGATGGG
CAGCGTCCATCAAAGCTGgacaggcgaggagggctgcATCATTTTACTAC
TATGGGCCGGAGGGCATTGCTTTATTGATGGGGCTTGTTTGCCGCAGGGC
TATGAAAAGGGTGGATGCTGTACAGAGAGCGTGAAGGATTGAAATTTCCC
CGTCTGAATCTGGTACCCGGCTTGCGATGTAGCGGGACAAGGGTGAAAAC
GGGCGAAATGCAAAAAATGAAGCAAAGCGAAGCAAACTTTGACGATCTCC
AtcctttttggggggggagccCTATGTCGTCTTATAGGAGGGcgcatttc
cttcctgcgTCCTAAAAATAAAATGCAACGGACGACTTTACAGCAAACTC
AGTTGGACGCTCAGACATCGAACTGTCGTCAAAGACAGTCTAGAAGGCGT
TGGGCATGTCGGGCAGGCTCTGTGGGCCGCTTTGTCcacttcccccttcc
tccccttcctatccccccccctttacACCACTCCCGTCAACTCCAGAGAT
GAGACCATCATGAACTTAGCCGCTCCGTACTTCTTGCGGATGGCCTGCAG
GGTCTGGGACCTGGAGTTCAGCCACGGTGAAAGGACGcgcaggcaaggaa
ggagagcgtcCTCGCTGTACTTGGTGTAGTGGTTCAAGGTGGGCGACCAG
GATCGCATTCCGCAGTTTTTCCGTGCCAGGTaaacggcggcggcggcgac
catggagggcagga back to topCoding sequence (CDS) from alignment at CM002464.1:434993..436656+ >rna4815 ID=rna4815|Name=rna4815|organism=Nannochloropsis gaditana|type=CDS|length=729bp|location=Sequence derived from alignment at CM002464.1:434993..436656+ (Nannochloropsis gaditana)
ATGGACACACAAAGAATAGACACGGCGAGTGATCATGCTCAGAAAACCCT
ATCAGGAGGTGACGGGGCAGCGAGCGCGAAGCAACCCAGCGTTGTCAGGC
ATGATGGTCCTCTTGTATGTATAGACCGTGGCCAATCTGCTCTTCCCGAG
CAAGGCTACGACTTTTTAATGGAGACGCTTGGATGTGATTTGGGGAGCGA
GCTCCTGGGGTccagcaaggaggagtacgGGGCACGATGGCTGAGAGAAG
TACGATTGCGCTTTCAAGAGCGGAGATACGAGAAGACTTGGGAGACGTTT
TTGGAGAATGGGGGCAAGTGCGGCGGGCGGTGCACATACTGGGCCATCCT
GCAGGTTCCTTCGGACAGATCATTTGACCTTCACGTCCACCCGTGCTTTg
aggtcctccacgtccttcgcGGAAGGCTTTACGAGAGGCGCATGCTCGGC
CCCCCTCTATCCctagcagaggaggaaggcaagccAGTTCGGGAGATGGC
GCCTGTGGACCTATCTGGGCTGTGCCCGCCTCCCGACTTCCGGGATGGTG
TCTTCCAGGAGGACACGATCAACGTGAACGAGATGGGCAGCGTCCATCAA
AGCTGgacaggcgaggagggctgcATCATTTTACTACTATGGGCCGGAGG
GCATTGCTTTATTGATGGGGCTTGTTTGCCGCAGGGCTATGAAAAGGGTG
GATGCTGTACAGAGAGCGTGAAGGATTGA back to top
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