EWM25883.1, cds4803 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25883.1 vs. NCBI_GenBank
Match: gi|585107751|gb|EWM25883.1| (hypothetical protein Naga_100054g26 [Nannochloropsis gaditana]) HSP 1 Score: 498.819 bits (1283), Expect = 1.264e-178 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
Query: 1 MDTQRIDTASDHAQKTLSGGDGAASAKQPSVVRHDGPLVCIDRGQSALPEQGYDFLMETLGCDLGSELLGSSKEEYGARWLREVRLRFQERRYEKTWETFLENGGKCGGRCTYWAILQVPSDRSFDLHVHPCFEVLHVLRGRLYERRMLGPPLSLAEEEGKPVREMAPVDLSGLCPPPDFRDGVFQEDTINVNEMGSVHQSWTGEEGCIILLLWAGGHCFIDGACLPQGYEKGGCCTESVKD 242
MDTQRIDTASDHAQKTLSGGDGAASAKQPSVVRHDGPLVCIDRGQSALPEQGYDFLMETLGCDLGSELLGSSKEEYGARWLREVRLRFQERRYEKTWETFLENGGKCGGRCTYWAILQVPSDRSFDLHVHPCFEVLHVLRGRLYERRMLGPPLSLAEEEGKPVREMAPVDLSGLCPPPDFRDGVFQEDTINVNEMGSVHQSWTGEEGCIILLLWAGGHCFIDGACLPQGYEKGGCCTESVKD
Sbjct: 1 MDTQRIDTASDHAQKTLSGGDGAASAKQPSVVRHDGPLVCIDRGQSALPEQGYDFLMETLGCDLGSELLGSSKEEYGARWLREVRLRFQERRYEKTWETFLENGGKCGGRCTYWAILQVPSDRSFDLHVHPCFEVLHVLRGRLYERRMLGPPLSLAEEEGKPVREMAPVDLSGLCPPPDFRDGVFQEDTINVNEMGSVHQSWTGEEGCIILLLWAGGHCFIDGACLPQGYEKGGCCTESVKD 242
BLAST of EWM25883.1 vs. NCBI_GenBank
Match: gi|1210520770|dbj|GAX20333.1| (hypothetical protein FisN_9Hh042 [Fistulifera solaris]) HSP 1 Score: 67.0106 bits (162), Expect = 1.033e-9 Identity = 45/138 (32.61%), Postives = 70/138 (50.72%), Query Frame = 0
Query: 87 RFQERRYEKTWETF-LENGGKCGGRCTYWAILQVPSDRSFDLHVHPCFEVLHVLRGRLYERRMLGPPLSLA-EEEGKPVREMAPVDLSGLCPPPDFRDGVFQEDTINVNEMGSVHQSWTGEE-GCIILLLWAGGHCFI 221
R ++++ E + E L GK R W ++ F LH HP E+++ L G L+E RM G P + + + +G + ++ L P F G Q+ T VNE+GS+H+S+T GC +L+LW G H I
Sbjct: 57 RTRDKKNETSDELIELLTTGKSNQRQLQWTLMDCAPGCQFRLHAHPNIELVYCLEGALHEIRMEGLPFTTSFDSDGSGEGVLIGPSVTQLQRPWTF--GTLQQGTWLVNEVGSIHKSFTASNCGCKLLVLWGGSHANI 192
BLAST of EWM25883.1 vs. NCBI_GenBank
Match: gi|219110835|ref|XP_002177169.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411704|gb|EEC51632.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 65.4698 bits (158), Expect = 4.105e-9 Identity = 41/120 (34.17%), Postives = 60/120 (50.00%), Query Frame = 0
Query: 106 KCGGRCTYWAILQVPSDRSFDLHVHPCFEVLHVLRGRLYERRMLGPPL--SLAEEEGKPVREMAPVDLSGLCPPPDFRDGVFQEDTINVNEMGSVHQSWTGE--EGCIILLLWAGGHCFI 221
K GR W+++ F+LH HP E+ + +G L+E RM G P+ + + K + P L+ L P F VNE+GS+H+S+T EGCI+L+LW G H I
Sbjct: 119 KSNGRQLQWSVMDCAPGCQFNLHAHPNLELAYCAKGALHEIRMKGDPITKTFKKHPNKKCQLKGPT-LTDLDRPWYF--STLSAGEWLVNEVGSIHKSFTATSGEGCILLVLWGGSHANI 235
BLAST of EWM25883.1 vs. NCBI_GenBank
Match: gi|551539754|ref|XP_005758325.1| (hypothetical protein EMIHUDRAFT_219581 [Emiliania huxleyi CCMP1516] >gi|485605929|gb|EOD05896.1| hypothetical protein EMIHUDRAFT_219581 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 65.4698 bits (158), Expect = 5.894e-9 Identity = 42/106 (39.62%), Postives = 54/106 (50.94%), Query Frame = 0
Query: 114 WAILQVPSDRSFDLHVHPCFEVLHVLRGRLYERRMLGPPLSLAEEEGKPVREMAPVDLSGLCPPPDFRDGVFQEDTINVNEMGSVHQSWTGEEGCIILLLWAGGHC 219
W++L + RSF +H HP EV VLRG LYE R+L P V + + V SG P F + N SVHQS+T +EG +IL+LWAG H
Sbjct: 157 WSLLLIEPHRSFPVHQHPDIEVEFVLRGALYENRLLSQP--------DAVLDASEVPDSGF--PRLFSVHTHGGGSFFSNPRFSVHQSYTMDEGVVILVLWAGRHV 252
BLAST of EWM25883.1 vs. NCBI_GenBank
Match: gi|1210513993|dbj|GAX26775.1| (hypothetical protein FisN_9Lh042 [Fistulifera solaris]) HSP 1 Score: 65.0846 bits (157), Expect = 6.053e-9 Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 0
Query: 105 GKCGGRCTYWAILQVPSDRSFDLHVHPCFEVLHVLRGRLYERRMLGPPLSLA-EEEGKPVREMAPVDLSGLCPPPDFRDGVFQEDTINVNEMGSVHQSWTGEE-GCIILLLWAGGHCFI 221
GK R WA++ F LH HP E+++ + G L+E RM G P + + + +G + ++ L P F G Q+ T VNE+GS+H+S+T GC +L+LW G H I
Sbjct: 88 GKSNQRPLQWALMDCMPGCQFRLHAHPNIELVYCMEGALHEIRMDGLPFTKSFDSDGAGEGILIGPSVTQLQRPWKF--GTLQKGTWLVNEVGSIHKSFTASNCGCKLLVLWGGSHANI 204
BLAST of EWM25883.1 vs. NCBI_GenBank
Match: gi|551570401|ref|XP_005771126.1| (hypothetical protein EMIHUDRAFT_118301 [Emiliania huxleyi CCMP1516] >gi|485622325|gb|EOD18697.1| hypothetical protein EMIHUDRAFT_118301 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 65.855 bits (159), Expect = 8.489e-9 Identity = 42/105 (40.00%), Postives = 54/105 (51.43%), Query Frame = 0
Query: 114 WAILQVPSDRSFDLHVHPCFEVLHVLRGRLYERRMLGPPLSLAEEEGKPVREMAPVDLSGLCPPPDFRDGVFQEDTINVNEMGSVHQSWTGEEGCIILLLWAGGH 218
W++L + RSF +H HP EV VLRG LYE R+L P V + + V SG P F + N SVHQS+T +EG +IL+LWAG H
Sbjct: 157 WSLLLIEPHRSFPVHQHPDIEVEFVLRGALYENRLLSQP--------DAVLDASEVPDSGF--PRLFSVHTHGGGSFFSNPRFSVHQSYTMDEGVVILVLWAGRH 251
BLAST of EWM25883.1 vs. NCBI_GenBank
Match: gi|1072229292|gb|OEU14027.1| (TPP_enzyme_N-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 63.929 bits (154), Expect = 3.581e-8 Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 0
Query: 120 PSDRSFDLHVHPCFEVLHVLRGRLYERRMLG---PPLSLAEEEGKPV------REMAPVDLSGLCPPPD---FRDGVFQEDTINVNEMGSVHQSWTGEE-GCIILLLWAGGHCFIDGA-CLP 227
P FDLH HP E+ + G+L+ERR++G P +L + EG + P LS + D F D + + N +GS+H+S+T E GC++L LW+G H D + C+P
Sbjct: 652 PKGFDFDLHGHPNIEICIPIVGKLHERRLIGAHIAPSALRQPEGDATFCDPRSSPLTPEHLSSIMDENDDLAFVDRSVKNGKVLFNPIGSIHKSYTRPEVGCLLLTLWSGIHSNFDKSDCIP 773 The following BLAST results are available for this feature:
BLAST of EWM25883.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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