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Properties
| Property Name | Value |
|---|
| Product | Nucleic acid-binding protein |
| Orig transcript id | gnl|cribi|Naga_100054g13.5550.mrna |
| Orig protein id | gnl|cribi|Naga_100054g13.5550 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:408710..410487 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4803 ID=rna4803|Name=rna4803|organism=Nannochloropsis gaditana|type=mRNA|length=1320bp
ATGAAACTGACTGTTAAAGACGTGGGGGGGAAGAAAATGGTTGTGGAGGT
GGAGCCGGCCATGAAGATAGGTGAACTCAAAACTAAGTTGCAAGCAGAGC
AGAACGGAGCGGATCCTGCCCGTCAAAAAATGATTCACAAGGGTAAAGTG
TTGAAGGATGACGACACAATTGAATCGACTGGTGTTACAGAAACTGATTT
TTACGTCTGCATGGTTTCAGCGGCCCCAAAGCCTAAAACAACGCCTGTTG
CTGCTCCAGCTCCAGCAGCTACGACCGCGCCGGCTACTCCTTCTGTAGGA
ACAACTCCGGAGACAACAACCACCGGCACGGCAGCTACCCCGCCCGCTCC
TTCTCCAGCCGATGCGGCTCAAGTGGAAGGGTTAGTGTCCATGGGCTTCG
CCGAGGCAAACGTTCGCGCGGCTTTGGAAGCAACGGGGGGCAGTCCCGAC
GCGGCGTATGCCCTGTTGGAGAGCGGAGCTCCTATCCAGCCTCCTACCCC
GGCCGCCACCCCCTCAGCGACAAGCGCGGCCTCCAACTCGATCACGTCTC
TCGAGGCCTTCCGCGCCCTCCCACAATTCGATCAGCTCCGCCGCTTGGTC
CAATCGAATCCTGGCGCGATCGATCAGGTCCTAGGGTTCATCGGGCAGCA
GAGCCCACAGCTCCTGCAAGTCATCTTGGCCCAGCAGGATGAATTTGTGG
CCATGATGAACGAGCCGATTGAAGGCGATACTGCCTCAGGAGCTCAGCAG
TTGCAACAACAGCAACAACCATCGCAGCAGGGGAATCCGTTTGCCGCTCT
CGGGGGCTTGGGCGGCATGGAAGGAGCGGGGGGGGCGGAGGGGCAGAACG
GGCCCTCCCCACAACAGCTCGCTCAGATCCTGCAGGCCATGCCGGAGCAG
CAGCGGAACCAACTGTTGGCTGCGTTGGTGGGATTGCCTCCCGAACAGGT
GCAGCAGTTCAGCGGGCAGCTGATTGAGGCTCTGGCGAGTGGAGCGGCGC
CGGGATTAGGAGGCATGGGGGGGTTGGCGGGAGCACCTCCTCCGGGCTCG
CAGCGGATTGAGCTGACAGCGGAGGAAGCGGCGAACCTGAATCAGTTGGT
GGAGATGGGCTTCGAACGGAACGAGGCGCTGCAGGTCTTCTTGGCCTGTG
ATAAGAACCTGGAAATGGCAGCGAGCGTCCTCTTTCAAGAGGCGGAGACG
GGGGGGGCGGGCTTTGGGGGCGCTGGGGGGGCTGGTGGGAGTGGAGGCGA
TGGCGGGTCCGGCGGCGGCAGCGGCGGCTCGACAGGGGGTGACACGGGCA
GCGGGGATCAGATGTATTGA back to topprotein sequence of rna4803 >rna4803-protein ID=rna4803-protein|Name=rna4803|organism=Nannochloropsis gaditana|type=polypeptide|length=315bp
MPHGRPCFLPSTMIGSVLMLLLASASSFFFKSPYPAATATSGACMARHPN
GRSRAVLMPYANDQQGDGIASSTNESPIRAAVVTDKAKADSEGSRSKQSQ
NVTLLQALRPGMRLHGGVVGVTEFAAFLDVKVVREGPGGKLVRCNAMLHP
HDVPEGIKLLRDSHNQPLPLETDPNVIRRGIHVSVYVKDVFPNSGRFSVT
LDPSIDKAKVIAARKQKRLLGKKRNKVKKLEGVEEGAEKQARVVKLLRTA
LLLDIGMPVPAFLPHNYIPDTVPLESIRHLGALLRVRIKERTDRQIKCEM
IEVEPPSDCGSETKV back to topmRNA from alignment at CM002464.1:408710..410487- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4803 ID=rna4803|Name=rna4803|organism=Nannochloropsis gaditana|type=mRNA|length=1778bp|location=Sequence derived from alignment at CM002464.1:408710..410487- (Nannochloropsis gaditana)
ATGCCGCATGGAAGACCATGTTTCCTGCCAAGCACCATGATTGGGTCTGT
CCTTATGCTCCTTCTGGCCTCTGCCTCCTCGTTTTTCTTCAAGTCGCCGT
ATCCTGCTGCCACTGCCACCAGTGGAGCTTGCATGGCCCGACACCCGAAC
GGACGTTCTCGGGCAGTTTTGATGCCGTACGCTAATGATCAACAAGGCGA
TGGAATAGCTTCCAGCACAAACGAGTCACCTATCCGTGCAGCAGTGGTGA
CGGACAAGGCCAAAGCGGACTCTGAAGGATCAAGGTGATAGGGGAGGCTG
TCTCGAATTTTGTCCCAGGGGCCGTATAAGAAGCATATTTCACACATTGC
CAAGAGATGCTTTCTCAATGGACTCGAAGATTTTGATTTGCGACAGGGCA
CCATGACTCACCATGACTCTTTGGCTCTACCTTTTTTCCTACTCTTCCCT
TGGCAGGAGCAAGCAGAGTCAAAACGTCACTCTGCTTCAGGCATTGCGCC
CAGGAATGCGTCTTCACGGGGGAGTTGTAGGTGTAACAGAGTTTGCTGCA
TTTTTGGACGTTAAGGTCGTCCGTGAGGGGCCAGGAGGGAAGGTGAGATA
GGAGACTCGTCAAAGACCCTCTCTCATTTCGGCTGAGAGATTGAACGATA
TCAAGTGCGAGCAACTTTGTATGTCGCTCATTCGTTTGGTAGCTGATTGT
TTGTTTAAGCAACCTAGAGTGGTTTTCTCCCTGGCTTGCCTATATGTGCC
CTTGATGCCCCACGGTGCCGTCCCCCTCCCCTCAGTTGGTCCGCTGCAAC
GCCATGCTCCACCCGCACGACGTCCCGGAAGGGATCAAGCTCCTGCGGGA
CTCGCATAACCAGCCCTTGCCACTGGAGACTGACCCGAACGTAATCCGGC
GAGGCATCCACGTGAGCGTGTACGTGAAGGACGTGTTCCCCAACTCAGGG
CGCTTCTCTGTGACCCTCGACCCCTCCATCGACAAGGCCAAGGTGATTGC
CGCGCGGAAGCAGAAGCGGCTGCTGGGCAAGAAAAGAAACAAAGTGAAGA
AGCTGGAGGGCGTGGAGGAGGGTGCTGAGAAGCAGGCCCGGGTGGTCAAG
GTAAGTACAGTGGGAGGGGCTCGCTCGGATGTGGGAGGGTTTGAGGGGGG
GATGCTCGAGGGGAAACCGTGCGTGACAAACCCGCACAAGACAAGGGACT
GGCCGCATTGCTTTACACGGGTGTACGCATGCTTGTGATTTTAATGATGT
TTCGCATGCCAACCTCTACTTCTCCCTTTCCCTTTATAATTTTTCAGCTC
CTCCGGACGGCCCTGTTGCTGGACATAGGAATGCCGGTGCCGGCATTTTT
ACCCCACAATTATATTCCTGATACGGTGCCTTTGGAGGTACGTGGGGCTT
GTGAGTCGCTTTGAGTGGGGTTCATGAAGGCATGGGCGAGATCTCGTTTT
CCATATGCAGTCTTCTCTGCAACATAGCAAATTTGAAAGATATTTTTATT
ACTCAGATTTTTTCATATTGGTTGAGTTTTCATATGCTTGGACGCACGCA
AAGGGCCTAGGAACATGTCATGTAGGTGGCACAACGAGTATAGGAGCCAC
GCAGATCTAACGTCCCAAACTTTTCATGCCTATCCCAATTTCGACACTCG
ATCAGAGCATACGCCACCTGGGTGCTTTATTGAGGGTGCGAATAAAAGAG
AGGACAGATAGACAAATTAAATGCGAGATGATCGAGGTGGAGCCGCCCTC
AGACTGCGGTTCCGAGACTAAAGTATGA back to topCoding sequence (CDS) from alignment at CM002464.1:408710..410487- >rna4803 ID=rna4803|Name=rna4803|organism=Nannochloropsis gaditana|type=CDS|length=4740bp|location=Sequence derived from alignment at CM002464.1:408710..410487- (Nannochloropsis gaditana)
AGCATACGCCACCTGGGTGCTTTATTGAGGGTGCGAATAAAAGAGAGGAC
AGATAGACAAATTAAATGCGAGATGATCGAGGTGGAGCCGCCCTCAGACT
GCGGTTCCGAGACTAAAGTATGACTCCTCCGGACGGCCCTGTTGCTGGAC
ATAGGAATGCCGGTGCCGGCATTTTTACCCCACAATTATATTCCTGATAC
GGTGCCTTTGGAGTTGGTCCGCTGCAACGCCATGCTCCACCCGCACGACG
TCCCGGAAGGGATCAAGCTCCTGCGGGACTCGCATAACCAGCCCTTGCCA
CTGGAGACTGACCCGAACGTAATCCGGCGAGGCATCCACGTGAGCGTGTA
CGTGAAGGACGTGTTCCCCAACTCAGGGCGCTTCTCTGTGACCCTCGACC
CCTCCATCGACAAGGCCAAGGTGATTGCCGCGCGGAAGCAGAAGCGGCTG
CTGGGCAAGAAAAGAAACAAAGTGAAGAAGCTGGAGGGCGTGGAGGAGGG
TGCTGAGAAGCAGGCCCGGGTGGTCAAGGAGCAAGCAGAGTCAAAACGTC
ACTCTGCTTCAGGCATTGCGCCCAGGAATGCGTCTTCACGGGGGAGTTGT
AGGTGTAACAGAGTTTGCTGCATTTTTGGACGTTAAGGTCGTCCGTGAGG
GGCCAGGAGGGAAGATGCCGCATGGAAGACCATGTTTCCTGCCAAGCACC
ATGATTGGGTCTGTCCTTATGCTCCTTCTGGCCTCTGCCTCCTCGTTTTT
CTTCAAGTCGCCGTATCCTGCTGCCACTGCCACCAGTGGAGCTTGCATGG
CCCGACACCCGAACGGACGTTCTCGGGCAGTTTTGATGCCGTACGCTAAT
GATCAACAAGGCGATGGAATAGCTTCCAGCACAAACGAGTCACCTATCCG
TGCAGCAGTGGTGACGGACAAGGCCAAAGCGGACTCTGAAGGATCAAGAG
CATACGCCACCTGGGTGCTTTATTGAGGGTGCGAATAAAAGAGAGGACAG
ATAGACAAATTAAATGCGAGATGATCGAGGTGGAGCCGCCCTCAGACTGC
GGTTCCGAGACTAAAGTATGACTCCTCCGGACGGCCCTGTTGCTGGACAT
AGGAATGCCGGTGCCGGCATTTTTACCCCACAATTATATTCCTGATACGG
TGCCTTTGGAGTTGGTCCGCTGCAACGCCATGCTCCACCCGCACGACGTC
CCGGAAGGGATCAAGCTCCTGCGGGACTCGCATAACCAGCCCTTGCCACT
GGAGACTGACCCGAACGTAATCCGGCGAGGCATCCACGTGAGCGTGTACG
TGAAGGACGTGTTCCCCAACTCAGGGCGCTTCTCTGTGACCCTCGACCCC
TCCATCGACAAGGCCAAGGTGATTGCCGCGCGGAAGCAGAAGCGGCTGCT
GGGCAAGAAAAGAAACAAAGTGAAGAAGCTGGAGGGCGTGGAGGAGGGTG
CTGAGAAGCAGGCCCGGGTGGTCAAGGAGCAAGCAGAGTCAAAACGTCAC
TCTGCTTCAGGCATTGCGCCCAGGAATGCGTCTTCACGGGGGAGTTGTAG
GTGTAACAGAGTTTGCTGCATTTTTGGACGTTAAGGTCGTCCGTGAGGGG
CCAGGAGGGAAGATGCCGCATGGAAGACCATGTTTCCTGCCAAGCACCAT
GATTGGGTCTGTCCTTATGCTCCTTCTGGCCTCTGCCTCCTCGTTTTTCT
TCAAGTCGCCGTATCCTGCTGCCACTGCCACCAGTGGAGCTTGCATGGCC
CGACACCCGAACGGACGTTCTCGGGCAGTTTTGATGCCGTACGCTAATGA
TCAACAAGGCGATGGAATAGCTTCCAGCACAAACGAGTCACCTATCCGTG
CAGCAGTGGTGACGGACAAGGCCAAAGCGGACTCTGAAGGATCAAGAGCA
TACGCCACCTGGGTGCTTTATTGAGGGTGCGAATAAAAGAGAGGACAGAT
AGACAAATTAAATGCGAGATGATCGAGGTGGAGCCGCCCTCAGACTGCGG
TTCCGAGACTAAAGTATGACTCCTCCGGACGGCCCTGTTGCTGGACATAG
GAATGCCGGTGCCGGCATTTTTACCCCACAATTATATTCCTGATACGGTG
CCTTTGGAGTTGGTCCGCTGCAACGCCATGCTCCACCCGCACGACGTCCC
GGAAGGGATCAAGCTCCTGCGGGACTCGCATAACCAGCCCTTGCCACTGG
AGACTGACCCGAACGTAATCCGGCGAGGCATCCACGTGAGCGTGTACGTG
AAGGACGTGTTCCCCAACTCAGGGCGCTTCTCTGTGACCCTCGACCCCTC
CATCGACAAGGCCAAGGTGATTGCCGCGCGGAAGCAGAAGCGGCTGCTGG
GCAAGAAAAGAAACAAAGTGAAGAAGCTGGAGGGCGTGGAGGAGGGTGCT
GAGAAGCAGGCCCGGGTGGTCAAGGAGCAAGCAGAGTCAAAACGTCACTC
TGCTTCAGGCATTGCGCCCAGGAATGCGTCTTCACGGGGGAGTTGTAGGT
GTAACAGAGTTTGCTGCATTTTTGGACGTTAAGGTCGTCCGTGAGGGGCC
AGGAGGGAAGATGCCGCATGGAAGACCATGTTTCCTGCCAAGCACCATGA
TTGGGTCTGTCCTTATGCTCCTTCTGGCCTCTGCCTCCTCGTTTTTCTTC
AAGTCGCCGTATCCTGCTGCCACTGCCACCAGTGGAGCTTGCATGGCCCG
ACACCCGAACGGACGTTCTCGGGCAGTTTTGATGCCGTACGCTAATGATC
AACAAGGCGATGGAATAGCTTCCAGCACAAACGAGTCACCTATCCGTGCA
GCAGTGGTGACGGACAAGGCCAAAGCGGACTCTGAAGGATCAAGAGCATA
CGCCACCTGGGTGCTTTATTGAGGGTGCGAATAAAAGAGAGGACAGATAG
ACAAATTAAATGCGAGATGATCGAGGTGGAGCCGCCCTCAGACTGCGGTT
CCGAGACTAAAGTATGACTCCTCCGGACGGCCCTGTTGCTGGACATAGGA
ATGCCGGTGCCGGCATTTTTACCCCACAATTATATTCCTGATACGGTGCC
TTTGGAGTTGGTCCGCTGCAACGCCATGCTCCACCCGCACGACGTCCCGG
AAGGGATCAAGCTCCTGCGGGACTCGCATAACCAGCCCTTGCCACTGGAG
ACTGACCCGAACGTAATCCGGCGAGGCATCCACGTGAGCGTGTACGTGAA
GGACGTGTTCCCCAACTCAGGGCGCTTCTCTGTGACCCTCGACCCCTCCA
TCGACAAGGCCAAGGTGATTGCCGCGCGGAAGCAGAAGCGGCTGCTGGGC
AAGAAAAGAAACAAAGTGAAGAAGCTGGAGGGCGTGGAGGAGGGTGCTGA
GAAGCAGGCCCGGGTGGTCAAGGAGCAAGCAGAGTCAAAACGTCACTCTG
CTTCAGGCATTGCGCCCAGGAATGCGTCTTCACGGGGGAGTTGTAGGTGT
AACAGAGTTTGCTGCATTTTTGGACGTTAAGGTCGTCCGTGAGGGGCCAG
GAGGGAAGATGCCGCATGGAAGACCATGTTTCCTGCCAAGCACCATGATT
GGGTCTGTCCTTATGCTCCTTCTGGCCTCTGCCTCCTCGTTTTTCTTCAA
GTCGCCGTATCCTGCTGCCACTGCCACCAGTGGAGCTTGCATGGCCCGAC
ACCCGAACGGACGTTCTCGGGCAGTTTTGATGCCGTACGCTAATGATCAA
CAAGGCGATGGAATAGCTTCCAGCACAAACGAGTCACCTATCCGTGCAGC
AGTGGTGACGGACAAGGCCAAAGCGGACTCTGAAGGATCAAGAGCATACG
CCACCTGGGTGCTTTATTGAGGGTGCGAATAAAAGAGAGGACAGATAGAC
AAATTAAATGCGAGATGATCGAGGTGGAGCCGCCCTCAGACTGCGGTTCC
GAGACTAAAGTATGACTCCTCCGGACGGCCCTGTTGCTGGACATAGGAAT
GCCGGTGCCGGCATTTTTACCCCACAATTATATTCCTGATACGGTGCCTT
TGGAGTTGGTCCGCTGCAACGCCATGCTCCACCCGCACGACGTCCCGGAA
GGGATCAAGCTCCTGCGGGACTCGCATAACCAGCCCTTGCCACTGGAGAC
TGACCCGAACGTAATCCGGCGAGGCATCCACGTGAGCGTGTACGTGAAGG
ACGTGTTCCCCAACTCAGGGCGCTTCTCTGTGACCCTCGACCCCTCCATC
GACAAGGCCAAGGTGATTGCCGCGCGGAAGCAGAAGCGGCTGCTGGGCAA
GAAAAGAAACAAAGTGAAGAAGCTGGAGGGCGTGGAGGAGGGTGCTGAGA
AGCAGGCCCGGGTGGTCAAGGAGCAAGCAGAGTCAAAACGTCACTCTGCT
TCAGGCATTGCGCCCAGGAATGCGTCTTCACGGGGGAGTTGTAGGTGTAA
CAGAGTTTGCTGCATTTTTGGACGTTAAGGTCGTCCGTGAGGGGCCAGGA
GGGAAGATGCCGCATGGAAGACCATGTTTCCTGCCAAGCACCATGATTGG
GTCTGTCCTTATGCTCCTTCTGGCCTCTGCCTCCTCGTTTTTCTTCAAGT
CGCCGTATCCTGCTGCCACTGCCACCAGTGGAGCTTGCATGGCCCGACAC
CCGAACGGACGTTCTCGGGCAGTTTTGATGCCGTACGCTAATGATCAACA
AGGCGATGGAATAGCTTCCAGCACAAACGAGTCACCTATCCGTGCAGCAG
TGGTGACGGACAAGGCCAAAGCGGACTCTGAAGGATCAAG back to top
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