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Properties
| Property Name | Value |
|---|
| Product | Pex19 protein |
| Orig transcript id | gnl|cribi|Naga_100090g14.8834.mrna |
| Orig protein id | gnl|cribi|Naga_100090g14.8834 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1204484..1205796 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna480 ID=rna480|Name=rna480|organism=Nannochloropsis gaditana|type=mRNA|length=1915bp
GGGTTCCTTCTGTCGCGAAAAGACCAACACAACAGTCAACCCGCCTTTCC
TTTTCCACAGCGAACAAATCACAGAGCTTAAGAAGAAGAAGAGATGAGCA
CGAGGGTGGCATTCTTGGACTGCAAATGCGGCGTTGCGGGTGACATGCTT
TTGGGTGCTTTGATAGATGCGGGTGCTTCGCGTGAGAAACTTGTCGACGG
GTTGAGAAGCATTCATGCGTTGGCAGAGGAATGGGAATTGGAAACGGAGA
AAGTGGTCAGGAGCAAAGGACGCATTGCTGCAACGCTCGCCCGGGTCAAG
TCCATCTATGGCCACGAAGAGATTCCTGTTGACACGCAGAGGGGGCAATC
AGCCGCGTCAGATGAAAATAAAACAGGAGGCAGTGGTTGTCATGCGCACC
ACTCTCATGAGCATCACAGCCATGCCCACCACGAGCATCATCACCGCCCG
CATCGCAACCTGGAGATCATCCGAGAAATGATTATGAACGCCGATGGCCT
GCCGGTATCAGTGCGTCAGCAGAGCGTGGCTGTTTTTACGGCCTTGGCGG
AAGCGGAAGCCGCCACGCACGGTGTGGCGGTGGACAAGATCCACTTCCAT
GAAGTGGGGGCAGTGGACAGCATCATTGACACGGTCGGCACGGTGTACGC
CTTGCACCTGCTGGGCGTCCAGGAAGTGCACGCCTCCGCCTTACCCTACG
GGGAGGGATTCACGGGCGAGACCGCGCATGGCATTTTGCCTGTCCCCACC
CCAGCCACCCTGCGTCTCATGCTGGGCATGCCCATGCTCCCCGGGCCCCG
GGGCGCCGCGGGAGAACTCGTGACGCCCACAGGGGCCTCTTTGGTCAAGG
TGCTGGCCGCGGGTCGCATGGGCCAGCCGCCGGTCTTCGTCCCCGACCTC
TTGGGGGTAGGGGCGGGGAGCAAGGATTTCCCCGGCCACGCGAACGTGGT
CCGTGTCCTGGTCGGGGACCGGCCCCTCTCGAGCGAGGAGGGAGGGACGG
GGGACCTGGGGGTGGTTCGGGCGTCGAGGCCTGTGTGGGAAGCCGGGAAC
GGGGGCGAGGACGGCGTGCTCGCCCATGCCCAGCGGCTTCGTCCCTCCTT
CCATCCCCCGGCGGGCTACCTGTCCGAGAAGGGCGAGCCGGTGCAGCCCA
TGACTGTGCCCTCCCCCCTCCACCCTCCCACCGAACAACTCCCGATCCCC
GCCCCTCCTGCGTCCGCCTGGTCCTCGGGCGGGTGGGAAGAGCGGCATTT
GTGCGAGTTGGAAGCCAACTTGGACGACATGACCCCCGAAACTGCAAGCT
TTGCCTTGGAGAGGCTGTTGGCCCAACCGGGTTGTGCAGACGTCTGGTAC
ACGCCCGCCGTGATGAAAAAGGGGAGGCCGGGGCTGACCTTGCACCTGCT
CTGCGAGCCTTCCGCGGCCCCGGCCTTGCTCCGCTGCATCTTTTTGGAGA
CTCCCACCCTGGGTGTCCGGGCCCATACTGTCGCGCGCTTGGCTCTGGAA
CGGGACTTCGTCCTGGTCCCCACCCGATACGGTCAAGTTCGGGCGAAGGT
GGGCCGGATGGGAGGGGTGGTGGTGAACGTGAAGCCCGAGTACGAGGACT
GCCGCGGCGCGGCCATGGCCTTGGGCCTGCCTTTGCGGGCGGTGGTGGAC
GAGGCTACCCGGGTGGCGAGGGGGCAGGTGGAGGGAGGGGGGGAGGGAGG
GGAGGGGGAGGGGAGGGGGAAGGAGAAAAGGGAGATGGAAGAGGCGACGA
GGCTGGCAAGGAGGATGATGGGGCGACCGTTGTGTAGATGGACCTTTGAT
CGTTTGGGAAAGGTTTGGGAGAGGAGCTCGCTAGAGACAAGGAAGAGCGG
AAGAGAACGGATGCCCTCCCTCCCACCAGGAAGTTAAGGCACCCACATTT
TAAGCGTAGCAGATG back to topprotein sequence of rna480 >rna480-protein ID=rna480-protein|Name=rna480|organism=Nannochloropsis gaditana|type=polypeptide|length=288bp
MAETEDLDDILNDALDELDQEEEEEIHSAAHSTSQAPNSSVKSKAAVPVE
ATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGG
EGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGA
TDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRA
QYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQAL
GGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM back to topmRNA from alignment at CM002455.1:1204484..1205796- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna480 ID=rna480|Name=rna480|organism=Nannochloropsis gaditana|type=mRNA|length=1313bp|location=Sequence derived from alignment at CM002455.1:1204484..1205796- (Nannochloropsis gaditana)
TTCGAGGGCAATCCGAGCGACCGGCACATCTCAAGTGGAACCAGGCTGCT
GTGCTGTACCCACTGAGAAGCAAAGCATGTCTCCCTTCCTCCGTCCTTTC
CTCCAACGCTAGAATTCTGCCTTCACACATTGCGCTCGTATTCACTTGAT
TTTTCGGTCTTCACGCGCCGGACAACAGGTTGGCAACCAAAAAGGGCGCA
ACAAAATACAGCTTTCTCAGGTCGGGCTTCCTTCAGGCCATCTTCAGCGC
AGTACCCGTCCCCCGCATGGCAGAAACGGAGGACCTTGATGACATCCTCA
ACGATGCTCTCGACGAACTGGATCAAGAAGAGGAAGAGGAAATCCATTCA
GCCGCCCATTCAACGTCACAAGCTCCCAACTCGAGTGTGAAGAGCAAGGC
TGCCGTCCCTGTTGAAGCTACAGGTGCAGGAACAAGCACCCCGAAGTCTA
CCTCTACGGTCGCATCATCAGCGTCTACTGGTATAGGGACGGATGAAGAT
GAAGAGAAGGACCTGAAAGAAACCATAGCTAGGACCATCGAAATGTTGGG
CAAAATGGGAGGAGGCGAGGGAGGGAAAGAGGGAGAAGGGAAAGAGGACA
CGTTCGACGACGCGTTCTTGAGCAAACTGGTGGCAGAATTCGATAAACTT
GGGGCAGGTTTTGAAAGCGGGGCGGGAGAAGGAGACGGAGAAAAAGGAGG
GGGAAAAGAAGGCGCCACGGACACAATGGTCGACTCGATGGTGAGACAAT
TGCTAACAAAAGACTTGATGTACCCTCCCTTAAAGGAGGTAACGAGACAG
TTCCCTGCATGGCTGGAGTCAAACAAGGGCAAAGTGGAGGACGGTGTGTA
CGAGAAGCACCGGGCGCAGTACGAGTTGTTTGAGAAAATAGTGGCAGTCT
ACGAGGGTCAGGATGGCGGCGACGAGGGGGAGGGAAGGGACATGGGCGTT
TTGTTAGACCTGATGACGCAGGCGCAGGACTTTGGTCAACCACCCGCTGA
GATCGTGCAGGCCCTGGGGGGAGGATCAGGGGGAGGGTCGTTTACAGACC
CGGCGGGGGGGATGGCAGGCCTTCTGCACGCCGCCTTGGCGAGCGAGGGG
GGAGGGGACACGGAGGGGTGTTGTGTCATGTAGCTTATGTCGATACGGAG
GGGAAAGCGGGGGGTATGAGAGAGAGAAAGGAAAAGAAAGAGATGGATTG
CTGGAGATGAACTCCATCTGCTACGCTTAAAATGTGGGTGCCTTAACTTC
CTGGTGGGAGGGAGGGCATCCGTTCTCTTCCGCTCTTCCTTGTCTCTAGC
GAGCTCCTCTCCC back to topCoding sequence (CDS) from alignment at CM002455.1:1204484..1205796- >rna480 ID=rna480|Name=rna480|organism=Nannochloropsis gaditana|type=CDS|length=867bp|location=Sequence derived from alignment at CM002455.1:1204484..1205796- (Nannochloropsis gaditana)
ATGGCAGAAACGGAGGACCTTGATGACATCCTCAACGATGCTCTCGACGA
ACTGGATCAAGAAGAGGAAGAGGAAATCCATTCAGCCGCCCATTCAACGT
CACAAGCTCCCAACTCGAGTGTGAAGAGCAAGGCTGCCGTCCCTGTTGAA
GCTACAGGTGCAGGAACAAGCACCCCGAAGTCTACCTCTACGGTCGCATC
ATCAGCGTCTACTGGTATAGGGACGGATGAAGATGAAGAGAAGGACCTGA
AAGAAACCATAGCTAGGACCATCGAAATGTTGGGCAAAATGGGAGGAGGC
GAGGGAGGGAAAGAGGGAGAAGGGAAAGAGGACACGTTCGACGACGCGTT
CTTGAGCAAACTGGTGGCAGAATTCGATAAACTTGGGGCAGGTTTTGAAA
GCGGGGCGGGAGAAGGAGACGGAGAAAAAGGAGGGGGAAAAGAAGGCGCC
ACGGACACAATGGTCGACTCGATGGTGAGACAATTGCTAACAAAAGACTT
GATGTACCCTCCCTTAAAGGAGGTAACGAGACAGTTCCCTGCATGGCTGG
AGTCAAACAAGGGCAAAGTGGAGGACGGTGTGTACGAGAAGCACCGGGCG
CAGTACGAGTTGTTTGAGAAAATAGTGGCAGTCTACGAGGGTCAGGATGG
CGGCGACGAGGGGGAGGGAAGGGACATGGGCGTTTTGTTAGACCTGATGA
CGCAGGCGCAGGACTTTGGTCAACCACCCGCTGAGATCGTGCAGGCCCTG
GGGGGAGGATCAGGGGGAGGGTCGTTTACAGACCCGGCGGGGGGGATGGC
AGGCCTTCTGCACGCCGCCTTGGCGAGCGAGGGGGGAGGGGACACGGAGG
GGTGTTGTGTCATGTAG back to top
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