EWM30185.1, cds480 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30185.1 vs. NCBI_GenBank
Match: gi|585112843|gb|EWM30185.1| (Pex19 protein [Nannochloropsis gaditana]) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
Query: 1 MAETEDLDDILNDALDELDQEEEEEIHSAAHSTSQAPNSSVKSKAAVPVEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM 288
MAETEDLDDILNDALDELDQEEEEEIHSAAHSTSQAPNSSVKSKAAVPVEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM
Sbjct: 1 MAETEDLDDILNDALDELDQEEEEEIHSAAHSTSQAPNSSVKSKAAVPVEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM 288
BLAST of EWM30185.1 vs. NCBI_GenBank
Match: gi|1183316389|gb|ORX46263.1| (Pex19 protein [Hesseltinella vesiculosa]) HSP 1 Score: 113.235 bits (282), Expect = 6.455e-26 Identity = 92/306 (30.07%), Postives = 149/306 (48.69%), Query Frame = 0
Query: 3 ETEDLDDIL-NDA--------LDEL----DQEEE-----EEIHSAAHSTSQAPNSSVKSKAAVPVEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGG--DEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM 288
E E LDD+L NDA +DEL DQ+ + E++ S+ + +S+V++ +VP +S PK S +S I ++ KD + + +I +EGE DAF+++L+ + + L A GD E +++ M+ QL++K+++Y P+K++ ++PAWLE+NK E YEK++ QYE+ +KIVA YE D DE +G+ ++D+MTQ QD GQPPA +++ + G F P GM + D E C +M
Sbjct: 55 EEESLDDMLDNDAFASQLQAGMDELFANMDQDPDMKAAFEKVWSSMDPSQLMMDSNVEAARSVP------PSSVPKPASATPASFQDTIAQTMNKLKDSSKEVESSI-----------NEEGE-------DAFMAELMKQMEGL-------AENGDFE----------NVLEGMMSQLMSKEMLYEPMKDLVGKYPAWLEANKASTEKDQYEKYQQQYEMCQKIVAAYEAPDFNEKDEAQGKK---IMDMMTQMQDLGQPPASLLEDMAPGMN---FDSPE-GMPDM----------KDLENCTIM 302
BLAST of EWM30185.1 vs. NCBI_GenBank
Match: gi|1178067750|gb|ORE22149.1| (Pex19 protein [Rhizopus microsporus]) HSP 1 Score: 107.457 bits (267), Expect = 6.703e-24 Identity = 68/240 (28.33%), Postives = 118/240 (49.17%), Query Frame = 0
Query: 49 VEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM 288
V A+ +TP T A+S+S + +E I +T + K+ + ED+ +DAF+++L+ + + L G + +++ M+ QL++K+L+Y P+K++ +++P WLE NK K+++ YEK++ QY + + IVA YE D ++ E + + +DLMT+ QD GQPPAE++ + G G DP A D E C +M
Sbjct: 84 VWASFDNNNTPDKTREAATSSSKTPQS-------FQEAIGKT---MNKLKDSSKEIDSTIAEDS-EDAFMAELMKQMESLADN-----------------GEFENVLEGMMSQLMSKELLYEPMKDLAQKYPDWLEKNKDKIDNKEYEKYKEQYSICQNIVATYELPDFDEKNEAQAKKI-MDLMTKMQDLGQPPAELLDEMAPGMNFG---DPN-----------AVPDIKDLENCNIM 280
BLAST of EWM30185.1 vs. NCBI_GenBank
Match: gi|727147250|emb|CEG70340.1| (hypothetical protein RMATCC62417_06257 [Rhizopus microsporus]) HSP 1 Score: 106.301 bits (264), Expect = 1.648e-23 Identity = 68/240 (28.33%), Postives = 117/240 (48.75%), Query Frame = 0
Query: 49 VEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM 288
V A+ +TP T A+S+S + +E I +T + K+ + ED+ +DAF+++L+ + + L G + +++ M+ QL++K+L+Y P+K++ +++P WLE NK K ++ YEK++ QY + + IVA YE D ++ E + + +DLMT+ QD GQPPAE++ + G G DP A D E C +M
Sbjct: 85 VWASFDNNNTPDKTREAATSSSKTPQS-------FQEAIGKT---MNKLKDSSKEIDSTIAEDS-EDAFMAELMKQMESLADN-----------------GEFENVLEGMMSQLMSKELLYEPMKDLAQKYPEWLEKNKDKTDNKEYEKYKEQYSICQNIVATYELPDFDEKNEAQAKKI-MDLMTKMQDLGQPPAELLDEMAPGMNFG---DPN-----------AVPDIKDLENCNIM 281
BLAST of EWM30185.1 vs. NCBI_GenBank
Match: gi|729708179|emb|CEI95362.1| (hypothetical protein RMCBS344292_09551 [Rhizopus microsporus]) HSP 1 Score: 105.916 bits (263), Expect = 2.823e-23 Identity = 68/240 (28.33%), Postives = 117/240 (48.75%), Query Frame = 0
Query: 49 VEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM 288
V A+ +TP T A+S+S + +E I +T + K+ + ED+ +DAF+++L+ + + L G + +++ M+ QL++K+L+Y P+K++ +++P WLE NK K ++ YEK++ QY + + IVA YE D ++ E + + +DLMT+ QD GQPPAE++ + G G DP A D E C +M
Sbjct: 85 VWASFDNNNTPDKTREAATSSSKTPQS-------FQEAIGKT---MNKLKDSSKEIDSTIAEDS-EDAFMAELMKQMESLADN-----------------GEFENVLEGMMSQLMSKELLYEPMKDLAQKYPDWLEKNKDKTDNKEYEKYKEQYSICQNIVATYELPDFDEKNEAQAKKI-MDLMTKMQDLGQPPAELLDEMAPGMNFG---DPN-----------AVPDIKDLENCNIM 281
BLAST of EWM30185.1 vs. NCBI_GenBank
Match: gi|1178056236|gb|ORE11606.1| (Pex19 protein [Rhizopus microsporus var. microsporus]) HSP 1 Score: 105.145 bits (261), Expect = 3.021e-23 Identity = 68/240 (28.33%), Postives = 117/240 (48.75%), Query Frame = 0
Query: 49 VEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM 288
V A+ ++TP T A+S+S + +E I +T + K+ + ED+ +DAF+++L+ + + L G + +++ M+ QL++K+L+Y P+K++ +++P WLE NK K + YEK++ QY + + IVA YE D ++ E + + +DLMT+ QD GQPPAE++ + G G DP A D E C +M
Sbjct: 62 VWASFDNSNTPDKTREAATSSSKTPQS-------FQEAIGKT---MNKLKDSSKEIDSTIAEDS-EDAFMAELMKQMESLADN-----------------GEFENVLEGMMSQLMSKELLYEPMKDLAQKYPDWLEKNKDKTDSKEYEKYKEQYSICQNIVATYELPDFDEKNEAQAKKI-MDLMTKMQDLGQPPAELLDEMAPGMNFG---DPN-----------AVPDIKDLENCNIM 258
BLAST of EWM30185.1 vs. NCBI_GenBank
Match: gi|397611570|gb|EJK61386.1| (hypothetical protein THAOC_18139 [Thalassiosira oceanica]) HSP 1 Score: 107.842 bits (268), Expect = 3.247e-23 Identity = 71/217 (32.72%), Postives = 110/217 (50.69%), Query Frame = 0
Query: 52 TGAGTSTPKSTS----TVASSASTGIGTDED-------------EEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALG 251
GAG +TP ++S VA+S +G D+ EE D+ E+I R ++ + K D ++F+K G S + D EK GG + + D +D +++QLL+KDLMY P+KEV+ +FP WL NK + + Y+K+ QY+ F++IV VY E E + + +LM Q QDFGQPP +I+++L
Sbjct: 161 VGAGDATPNNSSGVSDRVAASPPVCVGGDDGDISTKQNAPDSGGEEPDVDESINRLLDGINKASREPPTMPSSADIDP----------SQFEKFGEEMMSSIMK-DFEKFGGSKDSDDA-IDGVMKQLLSKDLMYEPMKEVSARFPKWLAENKEDLSEEDYQKYGTQYQFFQRIVHVY-------ETEPDNFPRIQELMQQIQDFGQPPVDIIRSLA 358
BLAST of EWM30185.1 vs. NCBI_GenBank
Match: gi|729700864|emb|CEJ02177.1| (hypothetical protein RMCBS344292_16190 [Rhizopus microsporus]) HSP 1 Score: 105.916 bits (263), Expect = 3.365e-23 Identity = 61/209 (29.19%), Postives = 110/209 (52.63%), Query Frame = 0
Query: 49 VEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGG 257
V A+ +TP T A+S+S + +E I +T + K+ + ED+ +DAF+++L+ + + L G + +++ M+ QL++K+L+Y P+K++ +++P WLE NK K+++ YEK++ QY + + IVA YE D ++ E + + +DLMT+ QD GQPPAE++ + G G
Sbjct: 84 VWASFDNNNTPDKTREAATSSSKTPQS-------FQEAIGKT---MNKLKDSSKEIDSTIAEDS-EDAFMAELMKQMESLADN-----------------GEFENVLEGMMSQLMSKELLYEPMKDLAQKYPDWLEKNKDKIDNKEYEKYKEQYSICQNIVATYELPDFDEKNEAQAKKI-MDLMTKMQDLGQPPAELLDEMAPGMNFG 263
BLAST of EWM30185.1 vs. NCBI_GenBank
Match: gi|727140693|emb|CEG76863.1| (hypothetical protein RMATCC62417_11697 [Rhizopus microsporus]) HSP 1 Score: 105.145 bits (261), Expect = 3.605e-23 Identity = 68/240 (28.33%), Postives = 116/240 (48.33%), Query Frame = 0
Query: 49 VEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM 288
V A+ +TP T A+S+S + +E I +T + K+ + ED+ +DAF+++L+ + + L G + +++ M+ QL++K+L+Y P+K++ +++P WLE NK K + YEK++ QY + + IVA YE D ++ E + + +DLMT+ QD GQPPAE++ + G G DP A D E C +M
Sbjct: 63 VWASFDNNNTPDKTREAATSSSKTPQS-------FQEAIGKT---MNKLKDSSKEIDSTIAEDS-EDAFMAELMKQMESLADN-----------------GEFENVLEGMMSQLMSKELLYEPMKDLAQKYPDWLEKNKDKTDSKEYEKYKEQYSICQNIVATYELPDFDEKNEAQAKKI-MDLMTKMQDLGQPPAELLDEMAPGMNFG---DPN-----------AVPDIKDLENCNIM 259
BLAST of EWM30185.1 vs. NCBI_GenBank
Match: gi|727140692|emb|CEG76862.1| (hypothetical protein RMATCC62417_11697 [Rhizopus microsporus]) HSP 1 Score: 104.76 bits (260), Expect = 6.003e-23 Identity = 68/240 (28.33%), Postives = 116/240 (48.33%), Query Frame = 0
Query: 49 VEATGAGTSTPKSTSTVASSASTGIGTDEDEEKDLKETIARTIEMLGKMGGGEGGKEGEGKEDTFDDAFLSKLVAEFDKLGAGFESGAGEGDGEKGGGKEGATDTMVDSMVRQLLTKDLMYPPLKEVTRQFPAWLESNKGKVEDGVYEKHRAQYELFEKIVAVYEGQDGGDEGEGRDMGVLLDLMTQAQDFGQPPAEIVQALGGGSGGGSFTDPAGGMAGLLHAALASEGGGDTEGCCVM 288
V A+ +TP T A+S+S + +E I +T + K+ + ED+ +DAF+++L+ + + L G + +++ M+ QL++K+L+Y P+K++ +++P WLE NK K + YEK++ QY + + IVA YE D ++ E + + +DLMT+ QD GQPPAE++ + G G DP A D E C +M
Sbjct: 85 VWASFDNNNTPDKTREAATSSSKTPQS-------FQEAIGKT---MNKLKDSSKEIDSTIAEDS-EDAFMAELMKQMESLADN-----------------GEFENVLEGMMSQLMSKELLYEPMKDLAQKYPDWLEKNKDKTDSKEYEKYKEQYSICQNIVATYELPDFDEKNEAQAKKI-MDLMTKMQDLGQPPAELLDEMAPGMNFG---DPN-----------AVPDIKDLENCNIM 281 The following BLAST results are available for this feature:
BLAST of EWM30185.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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