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Properties
| Property Name | Value |
|---|
| Product | ubiquitin-conjugating enzyme |
| Orig transcript id | gnl|cribi|Naga_100048g18.10267.mrna |
| Orig protein id | gnl|cribi|Naga_100048g18.10267 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:333135..334224 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4780 ID=rna4780|Name=rna4780|organism=Nannochloropsis gaditana|type=mRNA|length=2020bp
CACCACAGCCAGCCGGAGGTTACTGCTTATCTTCTCCCGAATAGCCCCCT
CGGCGAGGTGCTTCATGATGATTATCCCCTTCCTACGCACGGGCCCCAAA
GCAGCAATTTTGGGAGGTTTCCTGCTCCATTTGGTCATGGGCACGCTCTA
TACTTTCGGCTCCCTGACCGTGTATCTCACTTCCTACCTACGCGTTTATG
ATCCTACCGTTACCTACAACAACACCATCGTAATTTATGCGTGTACAATA
GCTGGGCAAGCTCTTTTGATGTTTCTTGGTGGAAAAATTGAACTTCGCGT
GGGTCCTCGCGCGGCCGCTGCCATTGGTTCATGCTGCTTGGTCGGCGCTC
CCTTGCTCTCTTCAATGGTGACGAGCCTGTGGGCGATGACATGCACCTAT
GGGCTACTGTTTGGGTTTGGAGGAGGCCTGACGTATACCGTGCCCCTCGT
GTGCGGGTACCGGTGGGAGCCAGAGCGCAAGGGACTGGTCAGCGGCGTGA
TTCTGAGCGGCTTCGGCCTCTCCGCCTTGGTCTTCAATCAGATCCAGTCC
GTCCTCGTCAATCCGCACAATTTGAAGCCGGACGTGGTCTACAAGAATAA
GCGATACTTCGGGCCCGGCCCTGTGACCGACGCGGTCCCGGGCTTGCTGG
TAAAGCTCGGCCTCCTATACTCCCTGCTCTGCGTCACCGGCACCCTTCTG
TTGCAGGACCCTATCTACAAGAAGATCGAGGACGGGGCGGAGGAAGAGGA
GGAGGACAAGAAAGAGAGAGGCTGTTTGTCCGCTTCCTCCCACTACCTGG
ACATTGTCGGGGCTGAGTCGACCGCCCTGGTGGCAGCCGGCGACGGGCCC
GCTCACGACAGTCGTGTCCACAAGAGAGACGCCCCGTGCGAGGTAGCTGG
GGGTTCCTCGCCGCTCCGACGGCGTGGGTGGGAGGAGGAAGGGGCTATGG
AAATCTCGACTCTGGAATACCAGCGGTTGCGGGAAGACAGGGAGCCGGTG
GGAGAGGGAGGGAAGGGGAGGGAAGGAGGGAGAGGAGGAGTCGCGGTAGG
GAATGGAGGACATAAAAATGGTGTCGGGGAAGAGGTAAAGGGAGGAGGGA
GGGACTTGGCAGGGAAGGAGCCAAGGTTAGGAGGTACGCAGGTCGATAAG
GGCTCAGACAAGGACGTAAACGGGGAAAGGGCCAGGCCGGGAGCGGAGGA
GGAGGAGGAGGTGGAGGTATCACCGTCGGAACTCGTCTGCCTGCCGCAAG
CGTGGCACGTGTCCCTGTCGTTCACCTTAGGGGCCTTGAGCGGGCTGGTA
ACCCTGGCCACCTACAAGAGTATCGGCATCTCCACCTTCCTGGACGACCA
CTTCATGTCCGCAGTTGTGGGCAGCGTGTCCTCCGTGGCCAACGCCCTCG
GGCGGATTTTTTGGGGCTGGATGAGCGACCGTGCGGGTGCTTATCGCACG
CTCTACATCCTCTGCCTGTGTCAGGCAGGCTTCCTTTTTGCCTGGGGCCT
GACGGTGGGCGCGTGGAAGAGCCGGTGGCTGTTTGCGCTCTGCGTCGCCG
GGGTGGCCTTCTCCCACGGGGGCAATTTTGCAATTTACCCGGCCCTGATC
GCCACCCTCTTTGGGAAGACGAACAGCGCTCCGAATTTTGGGCTGATCTT
CTTGTTCTATGGCCTTGCCTCCCTGGTCGGGCTCAGTGTCCTACCCTGGT
TGTCTCCTGAGCTGACCCCATTGTGCGATGTGCTGGGAGGGATCGCACTG
ACCTCGGCGGGGTCCGTGTGGGGGCTGCAGGCCTGGTACACACCCAAGCT
GAAAGCGGGGGGGAGGCATCCGCTTTTGCGATGAAAGGAGGGGGGTTGTG
GACGTGTTGGGGGAAGAGAAGCGGAACGGGGGAGGGAGGAGCCGGGGCTC
TCCCTGGAAGACCCCCGGGCCTTGTACATCAGTGAGACCGCTCGGCACCA
TCGATGATGACGGGTCTCGTGTTACATAGGACAAGGAAAATAGCATATAG
CACACCAAATGACCAAGACG back to topprotein sequence of rna4780 >rna4780-protein ID=rna4780-protein|Name=rna4780|organism=Nannochloropsis gaditana|type=polypeptide|length=162bp
MWPGRAMSSPNRTAAAPPASGSQQDEIIVPRNFKLLEELDQAEKGQDPTI
SLGLQNQEDIFLVAWNGSIFGPPGTTFEGRLFELKIECGDRYPNEPPFVR
FVSRVNLPCVDQSTGVVNPSKLHILSHWDRHFTMERVLNELRREMMTQGS
RRLPQPPEGSRF back to topmRNA from alignment at CM002464.1:333135..334224- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4780 ID=rna4780|Name=rna4780|organism=Nannochloropsis gaditana|type=mRNA|length=1090bp|location=Sequence derived from alignment at CM002464.1:333135..334224- (Nannochloropsis gaditana)
ACACCTTCACCGCGTGTTCGACTTATTTGATTGTATTGATTTTGTCTTTT
TATTGTCACATACTTTGGCTGCTTGTGAACTCAGCACGGTCTCTGTGGTC
AATCAGCGTCATGCTATCGTCTAGGACTGCACTGCCCAACCTAGGGTTGG
CAGCCTTTAACTCACACAACGAATGTTTCTAAAATAAACGCATGCTAACA
GGTTGGTAAGCGGAAGGGAGAGAGGATGTGGCCGGGCCGGGCGATGTCAA
GCCCCAACCGTACGGCCGCTGCGCCTCCGGCGTCGGGAAGCCAGCAGGAT
GAAATTATCGTGCCCCGGAATTTCAAGCTCTTGGAGGAGTTGGACCAGGC
CGAAAAAGGGCAAGACCCTACCATTTCCCTAGGCCTACAGAACCAGGAAG
ACATTTTTCTGGTCGCCTGGAACGGTTCCATCTTCGGCCCGCCGGGCACG
ACGTTCGAAGGCCGCTTGTTTGAACTTAAAATCGAATGCGGAGATCGATA
CCCCAATGAGCCTCCTTTCGTCCGATTTGTGAGTCGAGTGAACCTTCCGT
GCGTCGATCAGAGCACTGGGGTGGTCAACCCGTCAAAGCTCCACATTTTG
AGCCATTGGGACCGACATTTCACGATGGAGCGTGTCTTGAATGAACTGAG
AAGAGAGATGATGACCCAGGGCAGTCGACGGTTGCCCCAGCCTCCTGAGG
GGTCCCGATTTTAGGGTTATGGGTGGAGGGGATCGGAGCGTGAAAGGAGG
ATTTGGAGGGGCAGAAAAAGCTTATATGCTCGGGCGTCGAGTGGAATCGG
GCCGTGTCAATGACCGGCACGAGCCTCTACTCAGGAATCTGAGCGCCGCC
CACCAGACGAGGCGAAAGGCCGCCTCGTACCTTGGGATGGCTGGAAGGGT
CTATGGAAAGGGGTCAGTGGTGTGTCCGACGGATGGAAGGGGGCTTTCCA
GCGAAAGGAGAGAGGAGGAAACGCAGAGGCGCGCGGCGTATGCCCGGACG
CCGTGTAAGTAACAGGAATCAAAAAGTTCGAGCAGGGCCCGAGGTAAACA
CGAAAAAGAACAACCTACAAGCGACGCTAACTGCGCCCGG back to topCoding sequence (CDS) from alignment at CM002464.1:333135..334224- >rna4780 ID=rna4780|Name=rna4780|organism=Nannochloropsis gaditana|type=CDS|length=489bp|location=Sequence derived from alignment at CM002464.1:333135..334224- (Nannochloropsis gaditana)
ATGTGGCCGGGCCGGGCGATGTCAAGCCCCAACCGTACGGCCGCTGCGCC
TCCGGCGTCGGGAAGCCAGCAGGATGAAATTATCGTGCCCCGGAATTTCA
AGCTCTTGGAGGAGTTGGACCAGGCCGAAAAAGGGCAAGACCCTACCATT
TCCCTAGGCCTACAGAACCAGGAAGACATTTTTCTGGTCGCCTGGAACGG
TTCCATCTTCGGCCCGCCGGGCACGACGTTCGAAGGCCGCTTGTTTGAAC
TTAAAATCGAATGCGGAGATCGATACCCCAATGAGCCTCCTTTCGTCCGA
TTTGTGAGTCGAGTGAACCTTCCGTGCGTCGATCAGAGCACTGGGGTGGT
CAACCCGTCAAAGCTCCACATTTTGAGCCATTGGGACCGACATTTCACGA
TGGAGCGTGTCTTGAATGAACTGAGAAGAGAGATGATGACCCAGGGCAGT
CGACGGTTGCCCCAGCCTCCTGAGGGGTCCCGATTTTAG back to top
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