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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100090g16.8839.mrna |
| Orig protein id | gnl|cribi|Naga_100090g16.8839 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1201262..1202321 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna478 ID=rna478|Name=rna478|organism=Nannochloropsis gaditana|type=mRNA|length=1110bp
ATGGCCATAGCCACAGGACGACATCTTGCGCCAGGCGCAGTCTTCCTCCT
GGTCCTATGTCTTGCTCGTGTCGAAGCCTTCCTCCAACCTCCTGCCACCC
CAGTTATCCCTCACGCCTTGACTGATGCTCAGGAACTCGAGCAGTGCACA
AATTTTGGAGCCGTGGCTACCATGCCGGGTTCTCGCACCTCGTCTTTCTC
ACGCATGTACATGGTCTCCCTCCGGGACAAATTTTTTGCCGCGGTCGACG
AGGAATTGAAGACACAATTTCCCCCCGGCCAAGGTGATATCAGCCGAGTG
CGCGCTTTCGTGGAATCCTGTAAAGCTGGGACCGTACCTCCCTCGGCGCC
AACTGATCTCCCCTACTTTCAACCTTCTGAAGAGTATGTGCCCGGCTTGA
CGGCTAAGCCGTGGCACGACCCTTACAGTTTCGAGTGGGTCCGGGGCTTG
GAGGAGGCGACCCCTATCATCCAAGAGGAGCTACGACAAGCCCTAGGCCA
AGGACAGGACCCGCAGGATTTCAGGGCGGACAGCAACGTGATGACTGTGA
TGGGTGCAGGGTGGACGGCCCTGCGCCTGCAACGGCTGGGACTGTGGAAC
GAGGATGTCTGCGCCCGCTTTCCCCGAACCCTCTCCGTCTTGGCCTCCCT
CCCCATTCCCTTCGCCGTCCGTGGCGTCATGTTCGCCAGACAGGCCCCGG
AAACCGGGGTTCAAGCTCACTCGGACGGGCGAAACTTCATCCTGACTATG
CATTTGGGCCTACGGATACCCAAGGAGGAAGGCGCGTGCTGGATCCGGGT
GGGCGGGGAGCGACGGTCCTGGCAAGAGGGCAAGGCGTTGGTCATCGATA
CCACGTTCGAGCATGAGACCGGGAACGGGAGCACGGAGGACCGCTACGTC
TTGATCGTCGACTTTTGGCACCCGGACCTCTCTGTAGAGGAGCGGGCGGC
GTTGAGGTCGTTTTACGACTTGCGGAACCGCTTCGAAGGGCGGGGCGGGG
GTACGGAAGGGGGAAAGGTACCCCCCCAAGGCTCGGAAAGAGGGGAGAAG
GGGAAAGAGGGTGGCGTTTTGGCAGGGCTGGCGGCCCTCTTTGGTGGACG
GGGGCAGTAG back to topprotein sequence of rna478 >rna478-protein ID=rna478-protein|Name=rna478|organism=Nannochloropsis gaditana|type=polypeptide|length=318bp
MLTRAVHLFEKHFGGRIQDLIRQKPIITATNLKREHLEELLAHRTCCVHI
QGFYPPEAAKGIAQRLTRDPSRQLEWLISNPQKGLESSDVRTIGSQPYNM
VASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLG
PLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHC
DDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLA
LLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRV
SIQSFISHKKGKPLQLDN back to topmRNA from alignment at CM002455.1:1201262..1202321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna478 ID=rna478|Name=rna478|organism=Nannochloropsis gaditana|type=mRNA|length=1060bp|location=Sequence derived from alignment at CM002455.1:1201262..1202321- (Nannochloropsis gaditana)
ATGCTGACGCGGGCCGTCCACCTGTTCGAAAAGCATTTCGGCGGGCGAAT
ACAAGATCTTATACGACAGAAGCCTATCATCACGGCAACAAATTTGAAAC
GGGAGCATTTGGAGGAGGTATGTGCGCATATTCTTTCATTGTAGTGCTGG
CCAGGGTTTAGCCATTCCTCAAGACGGATACATAGTAAATGAAGCTTTTT
CAAACACAATTACTGGACAGCTGCTCGCCCATCGTACTTGCTGTGTGCAT
ATTCAAGGATTCTATCCCCCGGAAGCCGCGAAAGGAATAGCGCAACGCCT
AACTAGAGATCCCTCACGACAGCTGGAATGGCTTATCAGCAATCCCCAAA
AGGGCTTAGAGAGCTCCGATGTCCGCACAATTGGCTCTCAACCTTACAAC
ATGGTGGCATCCTTACGTGACAAAAAGGCCGAAAAGGCGTACTTTGACGG
GGCTTTGGCATGCATGCGTGAGCTTCGAGAAGGCATTAGCTCGAGGGATG
CAGGACTTGCGGGAGAAGGTGCTGAGCATGCATCGACCCTGCCTGTGCTT
GGGCCACTCGACAAGCTTCGACTGGAGCTCGACGAGATCTTTCCCCAAGG
CGCCACCGTGACGAAGCACCCCAAGGACGGGCGGCCTTTCGTGGCGGGGT
TGGCGCGGGTCATGCAGGGGCCCACGAGGCATTTGGAGGGCTTTATCCAC
TGCGACGACATCCATCCTCTCTCTCCAGACGAAGGCCTTTTCAGCGCCAA
TCTTTACCTCCAATTGCCAGGTACTGGTGGCGGTGAACTTCTCATCTATG
ACTTAGAAGTGCGTTCGCGCTTCGAATTTTACCAAAATGCTAGCACGCTT
GCTCTTCTCACCACCGCCGGAGAAGCTGGCCAAGATATTCTGAGAGCTCG
ATTGCCAAAACCCAAGATGATCAAGCCAGTAGCAGGAGATCTGATTTTAA
TATGTGCGCAGCGCCCGCATGCCGTGGCGGGCTTTCCCCTGGGCACGCGC
GTAAGCATCCAGTCGTTCATATCCCACAAAAAAGGAAAACCGCTGCAGCT
CGACAATTGA back to topCoding sequence (CDS) from alignment at CM002455.1:1201262..1202321- >rna478 ID=rna478|Name=rna478|organism=Nannochloropsis gaditana|type=CDS|length=1914bp|location=Sequence derived from alignment at CM002455.1:1201262..1202321- (Nannochloropsis gaditana)
CTGCTCGCCCATCGTACTTGCTGTGTGCATATTCAAGGATTCTATCCCCC
GGAAGCCGCGAAAGGAATAGCGCAACGCCTAACTAGAGATCCCTCACGAC
AGCTGGAATGGCTTATCAGCAATCCCCAAAAGGGCTTAGAGAGCTCCGAT
GTCCGCACAATTGGCTCTCAACCTTACAACATGGTGGCATCCTTACGTGA
CAAAAAGGCCGAAAAGGCGTACTTTGACGGGGCTTTGGCATGCATGCGTG
AGCTTCGAGAAGGCATTAGCTCGAGGGATGCAGGACTTGCGGGAGAAGGT
GCTGAGCATGCATCGACCCTGCCTGTGCTTGGGCCACTCGACAAGCTTCG
ACTGGAGCTCGACGAGATCTTTCCCCAAGGCGCCACCGTGACGAAGCACC
CCAAGGACGGGCGGCCTTTCGTGGCGGGGTTGGCGCGGGTCATGCAGGGG
CCCACGAGGCATTTGGAGGGCTTTATCCACTGCGACGACATCCATCCTCT
CTCTCCAGACGAAGGCCTTTTCAGCGCCAATCTTTACCTCCAATTGCCAG
GTACTGGTGGCGGTGAACTTCTCATCTATGACTTAGAAGTGCGTTCGCGC
TTCGAATTTTACCAAAATGCTAGCACGCTTGCTCTTCTCACCACCGCCGG
AGAAGCTGGCCAAGATATTCTGAGAGCTCGATTGCCAAAACCCAAGATGA
TCAAGCCAGTAGCAGGAGATCTGATTTTAATATGTGCGCAGCGCCCGCAT
GCCGTGGCGGGCTTTCCCCTGGGCACGCGCGTAAGCATCCAGTCGTTCAT
ATCCCACAAAAAAGGAAAACCGCTGCAGCTCGACAATTGAATGCTGACGC
GGGCCGTCCACCTGTTCGAAAAGCATTTCGGCGGGCGAATACAAGATCTT
ATACGACAGAAGCCTATCATCACGGCAACAAATTTGAAACGGGAGCATTT
GGAGGAGCTGCTCGCCCATCGTACTTGCTGTGTGCATATTCAAGGATTCT
ATCCCCCGGAAGCCGCGAAAGGAATAGCGCAACGCCTAACTAGAGATCCC
TCACGACAGCTGGAATGGCTTATCAGCAATCCCCAAAAGGGCTTAGAGAG
CTCCGATGTCCGCACAATTGGCTCTCAACCTTACAACATGGTGGCATCCT
TACGTGACAAAAAGGCCGAAAAGGCGTACTTTGACGGGGCTTTGGCATGC
ATGCGTGAGCTTCGAGAAGGCATTAGCTCGAGGGATGCAGGACTTGCGGG
AGAAGGTGCTGAGCATGCATCGACCCTGCCTGTGCTTGGGCCACTCGACA
AGCTTCGACTGGAGCTCGACGAGATCTTTCCCCAAGGCGCCACCGTGACG
AAGCACCCCAAGGACGGGCGGCCTTTCGTGGCGGGGTTGGCGCGGGTCAT
GCAGGGGCCCACGAGGCATTTGGAGGGCTTTATCCACTGCGACGACATCC
ATCCTCTCTCTCCAGACGAAGGCCTTTTCAGCGCCAATCTTTACCTCCAA
TTGCCAGGTACTGGTGGCGGTGAACTTCTCATCTATGACTTAGAAGTGCG
TTCGCGCTTCGAATTTTACCAAAATGCTAGCACGCTTGCTCTTCTCACCA
CCGCCGGAGAAGCTGGCCAAGATATTCTGAGAGCTCGATTGCCAAAACCC
AAGATGATCAAGCCAGTAGCAGGAGATCTGATTTTAATATGTGCGCAGCG
CCCGCATGCCGTGGCGGGCTTTCCCCTGGGCACGCGCGTAAGCATCCAGT
CGTTCATATCCCACAAAAAAGGAAAACCGCTGCAGCTCGACAATTGAATG
CTGACGCGGGCCGTCCACCTGTTCGAAAAGCATTTCGGCGGGCGAATACA
AGATCTTATACGACAGAAGCCTATCATCACGGCAACAAATTTGAAACGGG
AGCATTTGGAGGAG back to top
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