EWM30190.1, cds478 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30190.1 vs. NCBI_GenBank
Match: gi|585112848|gb|EWM30190.1| (hypothetical protein Naga_100090g16 [Nannochloropsis gaditana]) HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0 Query: 1 MLTRAVHLFEKHFGGRIQDLIRQKPIITATNLKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPSRQLEWLISNPQKGLESSDVRTIGSQPYNMVASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRVSIQSFISHKKGKPLQLDN 318 MLTRAVHLFEKHFGGRIQDLIRQKPIITATNLKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPSRQLEWLISNPQKGLESSDVRTIGSQPYNMVASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRVSIQSFISHKKGKPLQLDN Sbjct: 1 MLTRAVHLFEKHFGGRIQDLIRQKPIITATNLKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPSRQLEWLISNPQKGLESSDVRTIGSQPYNMVASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRVSIQSFISHKKGKPLQLDN 318
BLAST of EWM30190.1 vs. NCBI_GenBank
Match: gi|553179528|ref|XP_005852715.1| (hypothetical protein NGA_0726700 [Nannochloropsis gaditana CCMP526] >gi|422295819|gb|EKU23118.1| hypothetical protein NGA_0726700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 523.857 bits (1348), Expect = 0.000e+0 Identity = 265/299 (88.63%), Postives = 265/299 (88.63%), Query Frame = 0 Query: 1 MLTRAVHLFEKHFGGRIQDLIRQKPIITATNLKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPSRQLEWLISNPQKGLESSDVRTIGSQPYNMVASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTR 299 MLTRAVHLFEKHFGGRIQDLIRQKPIITATNLKREHLEE LEWLISNPQKGLESSDVRTIGSQPYNMVASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTR Sbjct: 1 MLTRAVHLFEKHFGGRIQDLIRQKPIITATNLKREHLEE----------------------------------LEWLISNPQKGLESSDVRTIGSQPYNMVASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTR 265
BLAST of EWM30190.1 vs. NCBI_GenBank
Match: gi|298710631|emb|CBJ32058.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 218.009 bits (554), Expect = 2.085e-67 Identity = 105/188 (55.85%), Postives = 145/188 (77.13%), Query Frame = 0 Query: 131 RDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRVSIQSFISHKKGKPLQLDN 318 RD G GE + P+LGPLDKLRLELDE++P+GA+V K+ + G+ F+AG+ARVM+GPTR++EGF+H D++ P+ G FSAN+YL++P TGG EL ++ L VRSR++F+++A TL+ LT GE GQ +LR +LP P++IK GDL+L+C QRPHA GFP+GTRVS+QSF++ +KGK L LDN Sbjct: 5 RDNG--GEAGQQQHQSPLLGPLDKLRLELDEVWPEGASVRKN-EAGKAFLAGVARVMRGPTRYVEGFMHVDELAPMVESRGTFSANVYLKVPPTGG-ELAVWPLAVRSRWDFFRHAETLSHLTVQGEEGQALLRRKLPPPRVIKVAPGDLVLLCVQRPHAAQGFPMGTRVSVQSFLTFEKGKALLLDN 188
BLAST of EWM30190.1 vs. NCBI_GenBank
Match: gi|1210517941|dbj|GAX23198.1| (hypothetical protein FisN_39Hh006 [Fistulifera solaris]) HSP 1 Score: 193.356 bits (490), Expect = 1.018e-55 Identity = 127/318 (39.94%), Postives = 173/318 (54.40%), Query Frame = 0 Query: 7 HLFEKHFGGRIQDLIRQKPIITATN-LKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPSRQLEWLISNPQKGLESSDVRTIGSQ-PYNMVA-SLRD--KKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPK-DGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLP---------GTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRVSIQSFISHK 309 EK +GG D IIT L L+ L+ H+ +H++GFY +AA + + L + + W +S +GLESSDV T+G PYN+VA S +D +AE YF+G +++ + R G H L PLD LRL LDE +P GA + + K + RPF GL R+M+GPTR +GFIH D++ L+P +GLFSAN+YLQ+P T L I+ + +RSR+++Y+NA LA L + Q LR L P I GDLILICAQRPHA GF G RVS+Q F+ H Sbjct: 27 QWIEKRYGGLPFDKGPAAEIITCHKVLHTSDLKRLMQHQATAIHVKGFYDSQAAIELGKELAHEAGAR-NWKVST-SRGLESSDVSTLGQHAPYNVVAASPKDIRSQAENEYFEG-------VQKELQRRRTVATEHGVRHR-----LWPLDLLRLSLDEAWPAGAGLARESKGEKRPFGGGLPRIMKGPTRWRKGFIHVDEMGILNPQKGLFSANIYLQMPDDIRENADSSTLQKILEIWPVAIRSRWDWYRNALLLAGLASQDAEDQMRLRFCLGAPLSIAVAPGDLILICAQRPHAAVGFQTGVRVSLQCFVQHN 330
BLAST of EWM30190.1 vs. NCBI_GenBank
Match: gi|1210518980|dbj|GAX22141.1| (hypothetical protein FisN_39Lh006 [Fistulifera solaris]) HSP 1 Score: 191.045 bits (484), Expect = 7.806e-55 Identity = 124/318 (38.99%), Postives = 172/318 (54.09%), Query Frame = 0 Query: 7 HLFEKHFGGRIQDLIRQKPIITATN-LKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPSRQLEWLISNPQKGLESSDVRTIGSQ-PYNMVASLRDK---KAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPK-DGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPG---------TGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRVSIQSFISHK 309 EK +GG D IIT L+ L+ L+ H+ +H++GFY +AA + + L + + W +S +GLESSDV T+G PYN+VA+ +AE YFDG +++ + R G H L PLD LRL LDE +P GA + + K RP+ GL R+M+GPTR +GFIH D++ L+P +GLFSAN+YLQ+P T L I+ + +RSR+++Y+NA L+ L++ Q LR L P I GDLILICAQRPHA GF G RVS+Q F+ H Sbjct: 27 QWIEKRYGGLPFDKGPAAEIITCDKVLQTSDLKRLMQHQATAIHVKGFYDLQAAVELGKELAHEAGVR-NWKVST-SRGLESSDVSTLGEHAPYNVVAASPKGIRLQAEDEYFDG-------VQKELQRRRTVATEHGVRHR-----LWPLDLLRLSLDEAWPAGAGLARESKGKKRPYSGGLPRIMKGPTRWRKGFIHVDEMGILNPQKGLFSANIYLQMPDDSRENADALTPQKILDIWPVAIRSRWDWYRNALLLSGLSSQDTEDQMRLRFCLGDPLSIAVAPGDLILICAQRPHAAVGFQSGVRVSLQCFVQHN 330
BLAST of EWM30190.1 vs. NCBI_GenBank
Match: gi|219121979|ref|XP_002181333.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407319|gb|EEC47256.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 183.726 bits (465), Expect = 3.448e-52 Identity = 125/313 (39.94%), Postives = 170/313 (54.31%), Query Frame = 0 Query: 2 LTRAVHLFEKHFGGRIQDLIRQKPIITATNLKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPS--RQLEWLISNPQKGLESSDVRTIGSQ-PYNMVASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPK-DGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGE----LLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRVSIQSFI 306 + R E +GG D +IT+ L L L+ H +HI+GFY EAAK + L + S + W +S +GLESSDV T+G P+N+ ++ + + YF G L REL + SRD G+ L PLD LRLELDE +P GA + + + RPF GL RVM+GPTR +GFIH D++ PL +GLFSAN+YLQLP E L I+ + +RSR+++Y+NA L L++ Q LR +L P I GDL+L+C QRPH GF GTRVS+Q F+ Sbjct: 14 IRRLFAFIESRYGGLPMDSGLMADVITSDKLCERDLVRLVKHEATALHIKGFYHTEAAKKLGSSLAAEASHGKGKNWRVST-SRGLESSDVFTLGEHAPFNIASARGNSSDQDEYFTGVL---RELHQRRRSRDDGMQ------------LWPLDLLRLELDEAWPAGAGLARETSGEKRPFSGGLPRVMKGPTRWSKGFIHVDEMGPLDSSKGLFSANIYLQLPSDEVTEAQRVLDIWPMGIRSRWDWYRNALLLTGLSSQDAEAQMRLRKQLGPPASITVEPGDLVLLCVQRPHCAVGFQTGTRVSLQCFL 310
BLAST of EWM30190.1 vs. NCBI_GenBank
Match: gi|676377839|ref|XP_009032198.1| (expressed protein [Aureococcus anophagefferens] >gi|323456658|gb|EGB12524.1| expressed protein [Aureococcus anophagefferens]) HSP 1 Score: 171.785 bits (434), Expect = 7.480e-48 Identity = 122/310 (39.35%), Postives = 165/310 (53.23%), Query Frame = 0 Query: 10 EKHFGGRIQDLIRQKPIITATNLKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPSRQLEWLISNPQKGLESSDVRTIGSQPYNMVASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPL-GTRVSIQSFISHKK-GKPLQLD 317 E+ +GG + L++ P+ L LE L H + + + GF A A +R W +S+ +GLESSDV +G PYNM + D E+ + + A R LR AG GA +D LR ELD+ + G T + DGRP GL R+M GPTR +GF+H D + PLS G FSAN+YL+ P GGG+L ++ L SR+EFY NA TL+ LT+ EA Q LRARLP P ++ AGDL L+C QRPHAV G+ TR S+QSF++ +PL L+ Sbjct: 19 ERRWGG-LDRLVKPLPVERGP-LTSAALERLFRHESLALVVPGFVADPAPLADALVAAAATARN--WSVSS-ARGLESSDVTAVGGTPYNMAVAAGDT--ERYFSEDVAAAKRFLRTA--------AGGGAS---------AVDALRCELDDAWASGCTA-RRDADGRPHHCGLGRIMAGPTRWADGFVHVDALAPLSAGGGQFSANIYLRQP-AGGGDLEVWPLAFSSRWEFYANAHTLSKLTSIDEADQRELRARLPAPVVVPVAAGDLALLCVQRPHAVRGWATHETRASLQSFVNFAGPDRPLTLE 302
BLAST of EWM30190.1 vs. NCBI_GenBank
Match: gi|397629113|gb|EJK69204.1| (hypothetical protein THAOC_09568 [Thalassiosira oceanica]) HSP 1 Score: 163.696 bits (413), Expect = 2.104e-44 Identity = 111/314 (35.35%), Postives = 159/314 (50.64%), Query Frame = 0 Query: 2 LTRAVHLFEKHFGGRIQDLIRQ---KPIITATNLKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPSRQLE-WLISNPQKGLESSDVRTIG-SQPYNMVASLRDKKAEKA--------YFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDG-------RPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTG--------GGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQR 287 L++ L E FG I+ L+ + I + L+ EHL LLAH +H++ FY A I L + W +S +GLESSDV T+G P+N VA+ + ++ + YF+G A + R +S A PLDKLRLEL+E +P GA + + RPF GL R+M+GPTR GFIH D++ PL P GLFSAN+YL++P G G L ++ L VRSR ++Y+NA T++ L+ A Q L L +P +I+P GDL+++C QR Sbjct: 32 LSQFFQLVETRFGN-IESLMDEGSAAETIVSDELRPEHLARLLAHDATALHVRNFYERGTAIRIGNDLIEESVHNTNNWRVST-SRGLESSDVGTLGMHSPFN-VATAKARQLNQGEGIDPVNEYFEGVQAEFKIRRRMPAS---------ARETGQFYRFWPLDKLRLELEESWPSGAGLAREEATKSADKPYPRPFGGGLPRIMKGPTRWKRGFIHVDELGPLDPFRGLFSANIYLKMPEIGDAKKSPEDAGSLYVWPLGVRSRLDWYRNAVTMSSLSAQDAASQIDLWHSLGQPNVIRPEPGDLVMLCTQR 333
BLAST of EWM30190.1 vs. NCBI_GenBank
Match: gi|1072234810|gb|OEU19539.1| (hypothetical protein FRACYDRAFT_235598 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 127.102 bits (318), Expect = 2.395e-29 Identity = 98/338 (28.99%), Postives = 148/338 (43.79%), Query Frame = 0 Query: 26 IITATNLKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPSRQL------------EWLISNPQKGLESSDVRTIGSQ-PYNMVASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATV--------------------TKHPKDGRPFVAGLARVMQGPTRHLEGFIHCDDIHPLSPDEGLFSANLYLQLPGTGGGE------------------------LLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARL------------PKPKMIKPVAGDLILICAQRPHAVAGF 294 ++T +L+ + +E+L +H + I+ FYP A + L + + W IS KGLESSDV T+G PYN+ + + E+ YF+ E+R + RD L LRLELDEI+P GA + +++ + + GL R+M GPTR +G +H D++ PLS +G FSAN+YLQLP + I+ L+++S++++++NA+TL+ LT+ GQ ILR L I GDLIL+C QRPH GF Sbjct: 138 VVTRNSLELQDIEKLFSHEIIALKIKNFYPSNYASELGNELANEGTNNTNSNSNTSNTNMKNWKIS-TSKGLESSDVFTLGRHSPYNIAIAANNNGGEEDYFN-------EVRNEL--RDRHL-------------------LRLELDEIWPYGAGLARRRRRTESGINKNSDDKNKSRNKNNRQCMGGGLPRLMIGPTRWKKGLVHVDELAPLSIHKGCFSANIYLQLPYHKAKAKIKPIKDEENTEIKEQEQEQEQPVMEIWPLQIKSKWDWFRNATTLSHLTSQDPEGQVILRKVLNGDGGGGDNSKNNNKYTINVHPGDLILLCVQRPHCAIGF 446
BLAST of EWM30190.1 vs. NCBI_GenBank
Match: gi|752734964|ref|WP_041382086.1| (hypothetical protein [Photorhabdus asymbiotica]) HSP 1 Score: 122.094 bits (305), Expect = 3.020e-29 Identity = 92/303 (30.36%), Postives = 140/303 (46.20%), Query Frame = 0 Query: 23 QKPIITATNLKREHLEELLAHRTCCVHIQGFYPPEAAKGIAQRLTRDPSRQLEWLISNPQKG----LESSDVRTIGSQPYNMVASLRDKKAEKAYFDGALACMRELREGISSRDAGLAGEGAEHASTLPVLGPLDKLRLELDEIFPQGATVTKHPKDGRPFVAGLARVMQGPTRH--LEGFIHCDDIHPLSPDE-GLFSANLYLQLPGTGGGELLIYDLEVRSRFEFYQNASTLALLTTAGEAGQDILRARLPKPKMIKPVAGDLILICAQRPHAVAGFPLGTRVSIQSFISHKKGKPLQLDN 318 + +I + +LK L +L + +HI+ + A ++ + LE + +KG L V IG +D + K YFD AL+ +R++R + P+L P DK RLELDE++ GA++ +G+ AG+ARVM+ P R +E H D + S + G FS N+YL+ P T GGEL ++D+ E ++ R LP+ +IKP GDLI+I ++PHA+ FP G R+S+QSFI K L L N Sbjct: 2 KNEVIVSNSLKENELAKLFNNEVLAIHIKEYVDSHIANKLSDFFLS--HKNLECHPHDLKKGDDVVLVDYGVDRIGVSYNTTFGKPKDSDSYKKYFDNALSAIRDVRNFCA-----------------PMLAPFDKFRLELDEVWSAGASIANF--EGKKMHAGIARVMRRPERSFMVEKQPHFDGLQQQSVNLLGQFSVNIYLKTP-TNGGELELWDVPAIPITELIEDNPEYNW------------RGTLPQSILIKPEQGDLIIINTRKPHAIRSFPDGCRISLQSFIGLSLNKHLMLWN 270 The following BLAST results are available for this feature:
BLAST of EWM30190.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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