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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100134g10.9881.mrna |
| Orig protein id | gnl|cribi|Naga_100134g10.9881 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:263236..265753 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4757 ID=rna4757|Name=rna4757|organism=Nannochloropsis gaditana|type=mRNA|length=507bp
ATGGACATCGCTGCTGAAGGCTTGCGACGGTCAAAGCAGGTGCCCGAAGA
CGACGCTCGTCGCGCCCTGCGTGTCGTCCGAAGTCAGCTGCCAGTTTCCG
CTCGTGATACCCACAAGATCGGAGTGATAGGCAGTTCTGCCGGCGGACAC
TTGATGGCAACACTGATGGCGTATAACGACGAAGGGAACGCGCACGCAAC
AAATACTATTGAGCAACAGAGAAGTCGCCCTGATTTTGGTGTCCTTGTAT
ATCCCGTCATTTCCATGGAGGACGGCCTGACTTACGACCCCTCAAAGACC
AACCTTTTCGGGCACAACCTGACCTCGCAAAAACGCCAAAGATTTGTGGA
GTATTTTTCTATCGAGAAGCACGTGAATCATCTGTTCCCGCCAGTATTCA
TGTTCCACACCAAAGACGACGCGGTTGTCAGCGTGGAAAATACCTATCGA
ATGGTCGATGCACTTGAGAAGGCAAAGGTATCTAAAGAGCAAAAGGGAGG
GCTGTGA back to topprotein sequence of rna4757 >rna4757-protein ID=rna4757-protein|Name=rna4757|organism=Nannochloropsis gaditana|type=polypeptide|length=500bp
MLVCHKRRRHLKKLFDRFFIPQGNSAMKRSRESIMCASQEDPLVMRSTWS
ITLFRSVNCCVVLFAGFILAALSNIDNIRGSRSWYTTTLSDIRAPMVPVA
PFLLTDRESFKSEELHFSWKVDNQLEIAATTEANGARNVTGPGAGVAACT
LVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYVNLVNFLENGVW
GGPDPQLENECQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENR
YYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQT
PDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSRQ
RGCEPGACDQEPHWVHDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDL
ERLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISIL
DAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLNKVLLNYLCPS back to topmRNA from alignment at CM002464.1:263236..265753+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4757 ID=rna4757|Name=rna4757|organism=Nannochloropsis gaditana|type=mRNA|length=2518bp|location=Sequence derived from alignment at CM002464.1:263236..265753+ (Nannochloropsis gaditana)
GGTATTGTCAGTACGATCCACATCCTGCCAAGTCCTCATCAACATTGTGT
TGTATGTGAAGTTGCATGGTTGAAGCCATCCGAAGCAATGCTTGTGTGTC
ATAAGCGCCGTCGTCACCTAAAGAAGTTATTTGACCGTTTCTTCATCCCA
CAGGGCAACAGTGCCATGAAAAGAAGCAGGGAAAGTATAATGTGCGCCAG
TCAAGAGGATCCACTAGTCATGCGCTCGACCTGGAGCATAACATTGTTTC
GATCTGTCAACTGCTGTGTCGTGCTTTTTGCTGGTTTCATTCTTGCTGCG
TTGAGTAACATCGACAACATTCGAGGGTCCCGCTCGTGGTACACAACTAC
TCTTTCCGACATAAGAGCGCCTATGGTTCCAGtggctcctttcctcttga
cTGATCGGGAGTCATTCAAGTCGGAGGAGCTCCACTTTTCGTGGAAAGTC
GACAATCAACTTGAAATTGCAGCCACTACAGAAGCGAATGGGGCGAGAAA
CGTAACGGGCCCTGGAGCAGGTGTAGCCGCTTGCACACTGGTCGTTGACG
GGTATGACATGCAATCATTTGAAGATCGGACAGCAGCGCTTTCCTGCTTG
CGTAACAAGAGCATTGTTATGGTGGGGGACAGTCTGACCAGGTGAGGTTC
CATCGTGCTCGAAATTGTAAttgccatccctttcccgccgGTAGGGGTAC
TGGGTACGATGTACTTAATTCCTTTTGACAAAACATTTTGTCAGATATCA
ATACGTAAATCTTGTCAACTTCTTGGAAAATGGCGTATGGGGTGGACCGG
ACCCGCAGCTGGAGAACGAGTGTCAGTGGAAGGGGTACCAGCGATTCTAC
CAGGTAACCTCGGCGGGCTATGTGTTGAAAGGACTTGCACATCCCATGCG
ATGCGACGGGAAGACGTGAAAACAGCGCGTTGTTTTTCAAGCCAGAATGT
CTGTGGCTCACTCTATCACAGGGCACCAACGCACGCTTTAATGGAAGGGA
GACCTGTGATTGTTACCGTGAGGAACCTGCGGATCGCCGAGGCAACATCG
AAAATCGATACTATCACAACGAAGTACTGGATGTCTGGGTCACTTTCTTT
CTATGGTTCAACCCCGCATGTGGGCATCAGGGTCACAACCTTACCTGGCT
GAACGTctccgtgcctccgcctcggctaGATCGGGCTCCGAAACGTTATG
GCCAGACACCCGACGTGGATGAATGGAGGAACTTGTATCGGGAAGGGCGG
CATTTCCAAGAGAAGACGTCGGTGCGGTCTGATGCTTCGGCCATGCCCCT
GACTTCCACGCTGCATCTTcttgaagaaaaagaggcttCTTCGATCCCAT
CTCGGCAAAGAGGCTGCGAGCCAGGGGCCTGTGACCAAGAGCCGCATTGG
GTGCACGACGTGTACGGGCTTTTCACCAATGTCGTACCGCTCCTCAACCC
CGACGTCCTCGTCTTTAACAGCGGGCACTGGGGCCGCCTGCCCGGGGCGT
ACGACCTGGAGCGACTGGCTCAGTCCGCGATAGAAGCAGTCCGAGTATCG
AATGGTCGGGTCGTGTACAAGACAACGACATGGCCGAGGTGCGTGTGGGT
GACGGAAAGCGGTTCAAAAGTGGCGAGATCGGGCGTGCTGGCTGCCTAGG
TCCTCTGTCGCAGATTGCGCGAAGGCTCAGGACGGGCGTCCGCAAGGCGA
TGTCATATGTATTATTTGAGTCCTTACAACCCCACCACAGTTGTGTTTTC
AATGCTTTTTCTCATCTGTACCGAAATGTTGTGAATATCGTATTTTCAAA
CCATGCAGGATTAATGACCCCTTCGCTCCTGAAGACGATTTGAAGGATTT
CTTTCAACGCCAAGGTATCAGCATTCTGGATGCAGGGGCTATCACATATC
CTGTCGCAGCCCTCGACAACCAACTGGTGAGCACACAAAGCACACATTTG
TTCTGGGATCGACTTCACTTTTATGCACCCGTATATGCAGGGCTGAACAA
AGTACTTCTGAACTACCTTTGTCCGTCCTGAAGACACGCGAAAAGTACAG
CGTTTGCGGCAACTAGCATAAATAAACAAAATGATCTAAAAGTAAAGAGC
AAGTGGCACTGATTTGCCACGAGGCATATCACATGTTTCCTTCCGTGCTG
TACTTCATATTTGTTCGGCTTTACGATCCGCCTTTCCCGCTGGAGAAATC
CATGATCAAGTGTTCGAAACGTGGATATgacggcgggggcagggggaaag
gttCCTTTCAGAAGTGCTCTGCATGATTCATATTCGGGTTGACCAGAATT
TCTGGCCATCATTAGGAATGTCATATGTCCGTCGTGCTTGGACGCTCTGT
CATTTTTGGGAAAAGGTGTCAGCGCTTGAAGCGAAAGCAGCAACAGACGG
CGCCAACGTGATACTATGCCCTATGCATGTGAGCATTTTTTACGCGGCAT
GAGTTGCGTTCGACAACGGAACATTGACAATGTTGACAACATAAGAATGA
AATGACTTTTATTGCCTT back to topCoding sequence (CDS) from alignment at CM002464.1:263236..265753+ >rna4757 ID=rna4757|Name=rna4757|organism=Nannochloropsis gaditana|type=CDS|length=6012bp|location=Sequence derived from alignment at CM002464.1:263236..265753+ (Nannochloropsis gaditana)
ATGCTTGTGTGTCATAAGCGCCGTCGTCACCTAAAGAAGTTATTTGACCG
TTTCTTCATCCCACAGGGCAACAGTGCCATGAAAAGAAGCAGGGAAAGTA
TAATGTGCGCCAGTCAAGAGGATCCACTAGTCATGCGCTCGACCTGGAGC
ATAACATTGTTTCGATCTGTCAACTGCTGTGTCGTGCTTTTTGCTGGTTT
CATTCTTGCTGCGTTGAGTAACATCGACAACATTCGAGGGTCCCGCTCGT
GGTACACAACTACTCTTTCCGACATAAGAGCGCCTATGGTTCCAGtggct
cctttcctcttgacTGATCGGGAGTCATTCAAGTCGGAGGAGCTCCACTT
TTCGTGGAAAGTCGACAATCAACTTGAAATTGCAGCCACTACAGAAGCGA
ATGGGGCGAGAAACGTAACGGGCCCTGGAGCAGGTGTAGCCGCTTGCACA
CTGGTCGTTGACGGGTATGACATGCAATCATTTGAAGATCGGACAGCAGC
GCTTTCCTGCTTGCGTAACAAGAGCATTGTTATGGTGGGGGACAGTCTGA
CCAGATATCAATACGTAAATCTTGTCAACTTCTTGGAAAATGGCGTATGG
GGTGGACCGGACCCGCAGCTGGAGAACGAGTGTCAGTGGAAGGGGTACCA
GCGATTCTACCAGGGCACCAACGCACGCTTTAATGGAAGGGAGACCTGTG
ATTGTTACCGTGAGGAACCTGCGGATCGCCGAGGCAACATCGAAAATCGA
TACTATCACAACGAAGTACTGGATGTCTGGGTCACTTTCTTTCTATGGTT
CAACCCCGCATGTGGGCATCAGGGTCACAACCTTACCTGGCTGAACGTct
ccgtgcctccgcctcggctaGATCGGGCTCCGAAACGTTATGGCCAGACA
CCCGACGTGGATGAATGGAGGAACTTGTATCGGGAAGGGCGGCATTTCCA
AGAGAAGACGTCGGTGCGGTCTGATGCTTCGGCCATGCCCCTGACTTCCA
CGCTGCATCTTcttgaagaaaaagaggcttCTTCGATCCCATCTCGGCAA
AGAGGCTGCGAGCCAGGGGCCTGTGACCAAGAGCCGCATTGGGTGCACGA
CGTGTACGGGCTTTTCACCAATGTCGTACCGCTCCTCAACCCCGACGTCC
TCGTCTTTAACAGCGGGCACTGGGGCCGCCTGCCCGGGGCGTACGACCTG
GAGCGACTGGCTCAGTCCGCGATAGAAGCAGTCCGAGTATCGAATGGTCG
GGTCGTGTACAAGACAACGACATGGCCGAGGATTAATGACCCCTTCGCTC
CTGAAGACGATTTGAAGGATTTCTTTCAACGCCAAGGTATCAGCATTCTG
GATGCAGGGGCTATCACATATCCTGTCGCAGCCCTCGACAACCAACTGGT
GAGCACACAAAGCACACATTTGTTCTGGGATCGACTTCACTTTTATGCAC
CCGTATATGCAGGGCTGAACAAAGTACTTCTGAACTACCTTTGTCCGTCC
TGAATGCTTGTGTGTCATAAGCGCCGTCGTCACCTAAAGAAGTTATTTGA
CCGTTTCTTCATCCCACAGGGCAACAGTGCCATGAAAAGAAGCAGGGAAA
GTATAATGTGCGCCAGTCAAGAGGATCCACTAGTCATGCGCTCGACCTGG
AGCATAACATTGTTTCGATCTGTCAACTGCTGTGTCGTGCTTTTTGCTGG
TTTCATTCTTGCTGCGTTGAGTAACATCGACAACATTCGAGGGTCCCGCT
CGTGGTACACAACTACTCTTTCCGACATAAGAGCGCCTATGGTTCCAGtg
gctcctttcctcttgacTGATCGGGAGTCATTCAAGTCGGAGGAGCTCCA
CTTTTCGTGGAAAGTCGACAATCAACTTGAAATTGCAGCCACTACAGAAG
CGAATGGGGCGAGAAACGTAACGGGCCCTGGAGCAGGTGTAGCCGCTTGC
ACACTGGTCGTTGACGGGTATGACATGCAATCATTTGAAGATCGGACAGC
AGCGCTTTCCTGCTTGCGTAACAAGAGCATTGTTATGGTGGGGGACAGTC
TGACCAGATATCAATACGTAAATCTTGTCAACTTCTTGGAAAATGGCGTA
TGGGGTGGACCGGACCCGCAGCTGGAGAACGAGTGTCAGTGGAAGGGGTA
CCAGCGATTCTACCAGGGCACCAACGCACGCTTTAATGGAAGGGAGACCT
GTGATTGTTACCGTGAGGAACCTGCGGATCGCCGAGGCAACATCGAAAAT
CGATACTATCACAACGAAGTACTGGATGTCTGGGTCACTTTCTTTCTATG
GTTCAACCCCGCATGTGGGCATCAGGGTCACAACCTTACCTGGCTGAACG
TctccgtgcctccgcctcggctaGATCGGGCTCCGAAACGTTATGGCCAG
ACACCCGACGTGGATGAATGGAGGAACTTGTATCGGGAAGGGCGGCATTT
CCAAGAGAAGACGTCGGTGCGGTCTGATGCTTCGGCCATGCCCCTGACTT
CCACGCTGCATCTTcttgaagaaaaagaggcttCTTCGATCCCATCTCGG
CAAAGAGGCTGCGAGCCAGGGGCCTGTGACCAAGAGCCGCATTGGGTGCA
CGACGTGTACGGGCTTTTCACCAATGTCGTACCGCTCCTCAACCCCGACG
TCCTCGTCTTTAACAGCGGGCACTGGGGCCGCCTGCCCGGGGCGTACGAC
CTGGAGCGACTGGCTCAGTCCGCGATAGAAGCAGTCCGAGTATCGAATGG
TCGGGTCGTGTACAAGACAACGACATGGCCGAGGATTAATGACCCCTTCG
CTCCTGAAGACGATTTGAAGGATTTCTTTCAACGCCAAGGTATCAGCATT
CTGGATGCAGGGGCTATCACATATCCTGTCGCAGCCCTCGACAACCAACT
GGTGAGCACACAAAGCACACATTTGTTCTGGGATCGACTTCACTTTTATG
CACCCGTATATGCAGGGCTGAACAAAGTACTTCTGAACTACCTTTGTCCG
TCCTGAATGCTTGTGTGTCATAAGCGCCGTCGTCACCTAAAGAAGTTATT
TGACCGTTTCTTCATCCCACAGGGCAACAGTGCCATGAAAAGAAGCAGGG
AAAGTATAATGTGCGCCAGTCAAGAGGATCCACTAGTCATGCGCTCGACC
TGGAGCATAACATTGTTTCGATCTGTCAACTGCTGTGTCGTGCTTTTTGC
TGGTTTCATTCTTGCTGCGTTGAGTAACATCGACAACATTCGAGGGTCCC
GCTCGTGGTACACAACTACTCTTTCCGACATAAGAGCGCCTATGGTTCCA
GtggctcctttcctcttgacTGATCGGGAGTCATTCAAGTCGGAGGAGCT
CCACTTTTCGTGGAAAGTCGACAATCAACTTGAAATTGCAGCCACTACAG
AAGCGAATGGGGCGAGAAACGTAACGGGCCCTGGAGCAGGTGTAGCCGCT
TGCACACTGGTCGTTGACGGGTATGACATGCAATCATTTGAAGATCGGAC
AGCAGCGCTTTCCTGCTTGCGTAACAAGAGCATTGTTATGGTGGGGGACA
GTCTGACCAGATATCAATACGTAAATCTTGTCAACTTCTTGGAAAATGGC
GTATGGGGTGGACCGGACCCGCAGCTGGAGAACGAGTGTCAGTGGAAGGG
GTACCAGCGATTCTACCAGGGCACCAACGCACGCTTTAATGGAAGGGAGA
CCTGTGATTGTTACCGTGAGGAACCTGCGGATCGCCGAGGCAACATCGAA
AATCGATACTATCACAACGAAGTACTGGATGTCTGGGTCACTTTCTTTCT
ATGGTTCAACCCCGCATGTGGGCATCAGGGTCACAACCTTACCTGGCTGA
ACGTctccgtgcctccgcctcggctaGATCGGGCTCCGAAACGTTATGGC
CAGACACCCGACGTGGATGAATGGAGGAACTTGTATCGGGAAGGGCGGCA
TTTCCAAGAGAAGACGTCGGTGCGGTCTGATGCTTCGGCCATGCCCCTGA
CTTCCACGCTGCATCTTcttgaagaaaaagaggcttCTTCGATCCCATCT
CGGCAAAGAGGCTGCGAGCCAGGGGCCTGTGACCAAGAGCCGCATTGGGT
GCACGACGTGTACGGGCTTTTCACCAATGTCGTACCGCTCCTCAACCCCG
ACGTCCTCGTCTTTAACAGCGGGCACTGGGGCCGCCTGCCCGGGGCGTAC
GACCTGGAGCGACTGGCTCAGTCCGCGATAGAAGCAGTCCGAGTATCGAA
TGGTCGGGTCGTGTACAAGACAACGACATGGCCGAGGATTAATGACCCCT
TCGCTCCTGAAGACGATTTGAAGGATTTCTTTCAACGCCAAGGTATCAGC
ATTCTGGATGCAGGGGCTATCACATATCCTGTCGCAGCCCTCGACAACCA
ACTGGTGAGCACACAAAGCACACATTTGTTCTGGGATCGACTTCACTTTT
ATGCACCCGTATATGCAGGGCTGAACAAAGTACTTCTGAACTACCTTTGT
CCGTCCTGAATGCTTGTGTGTCATAAGCGCCGTCGTCACCTAAAGAAGTT
ATTTGACCGTTTCTTCATCCCACAGGGCAACAGTGCCATGAAAAGAAGCA
GGGAAAGTATAATGTGCGCCAGTCAAGAGGATCCACTAGTCATGCGCTCG
ACCTGGAGCATAACATTGTTTCGATCTGTCAACTGCTGTGTCGTGCTTTT
TGCTGGTTTCATTCTTGCTGCGTTGAGTAACATCGACAACATTCGAGGGT
CCCGCTCGTGGTACACAACTACTCTTTCCGACATAAGAGCGCCTATGGTT
CCAGtggctcctttcctcttgacTGATCGGGAGTCATTCAAGTCGGAGGA
GCTCCACTTTTCGTGGAAAGTCGACAATCAACTTGAAATTGCAGCCACTA
CAGAAGCGAATGGGGCGAGAAACGTAACGGGCCCTGGAGCAGGTGTAGCC
GCTTGCACACTGGTCGTTGACGGGTATGACATGCAATCATTTGAAGATCG
GACAGCAGCGCTTTCCTGCTTGCGTAACAAGAGCATTGTTATGGTGGGGG
ACAGTCTGACCAGATATCAATACGTAAATCTTGTCAACTTCTTGGAAAAT
GGCGTATGGGGTGGACCGGACCCGCAGCTGGAGAACGAGTGTCAGTGGAA
GGGGTACCAGCGATTCTACCAGGGCACCAACGCACGCTTTAATGGAAGGG
AGACCTGTGATTGTTACCGTGAGGAACCTGCGGATCGCCGAGGCAACATC
GAAAATCGATACTATCACAACGAAGTACTGGATGTCTGGGTCACTTTCTT
TCTATGGTTCAACCCCGCATGTGGGCATCAGGGTCACAACCTTACCTGGC
TGAACGTctccgtgcctccgcctcggctaGATCGGGCTCCGAAACGTTAT
GGCCAGACACCCGACGTGGATGAATGGAGGAACTTGTATCGGGAAGGGCG
GCATTTCCAAGAGAAGACGTCGGTGCGGTCTGATGCTTCGGCCATGCCCC
TGACTTCCACGCTGCATCTTcttgaagaaaaagaggcttCTTCGATCCCA
TCTCGGCAAAGAGGCTGCGAGCCAGGGGCCTGTGACCAAGAGCCGCATTG
GGTGCACGACGTGTACGGGCTTTTCACCAATGTCGTACCGCTCCTCAACC
CCGACGTCCTCGTCTTTAACAGCGGGCACTGGGGCCGCCTGCCCGGGGCG
TACGACCTGGAGCGACTGGCTCAGTCCGCGATAGAAGCAGTCCGAGTATC
GAATGGTCGGGTCGTGTACAAGACAACGACATGGCCGAGGATTAATGACC
CCTTCGCTCCTGAAGACGATTTGAAGGATTTCTTTCAACGCCAAGGTATC
AGCATTCTGGATGCAGGGGCTATCACATATCCTGTCGCAGCCCTCGACAA
CCAACTGGTGAGCACACAAAGCACACATTTGTTCTGGGATCGACTTCACT
TTTATGCACCCGTATATGCAGGGCTGAACAAAGTACTTCTGAACTACCTT
TGTCCGTCCTGA back to top
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