EWM25922.1, cds4745 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25922.1 vs. NCBI_GenBank
Match: gi|585107793|gb|EWM25922.1| (hypothetical protein Naga_100134g10 [Nannochloropsis gaditana]) HSP 1 Score: 1046.57 bits (2705), Expect = 0.000e+0 Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0
Query: 1 MLVCHKRRRHLKKLFDRFFIPQGNSAMKRSRESIMCASQEDPLVMRSTWSITLFRSVNCCVVLFAGFILAALSNIDNIRGSRSWYTTTLSDIRAPMVPVAPFLLTDRESFKSEELHFSWKVDNQLEIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYVNLVNFLENGVWGGPDPQLENECQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVHDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLERLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLNKVLLNYLCPS 500
MLVCHKRRRHLKKLFDRFFIPQGNSAMKRSRESIMCASQEDPLVMRSTWSITLFRSVNCCVVLFAGFILAALSNIDNIRGSRSWYTTTLSDIRAPMVPVAPFLLTDRESFKSEELHFSWKVDNQLEIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYVNLVNFLENGVWGGPDPQLENECQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVHDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLERLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLNKVLLNYLCPS
Sbjct: 1 MLVCHKRRRHLKKLFDRFFIPQGNSAMKRSRESIMCASQEDPLVMRSTWSITLFRSVNCCVVLFAGFILAALSNIDNIRGSRSWYTTTLSDIRAPMVPVAPFLLTDRESFKSEELHFSWKVDNQLEIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYVNLVNFLENGVWGGPDPQLENECQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVHDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLERLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLNKVLLNYLCPS 500
BLAST of EWM25922.1 vs. NCBI_GenBank
Match: gi|585107796|gb|EWM25925.1| (hypothetical protein Naga_100134g12 [Nannochloropsis gaditana]) HSP 1 Score: 877.47 bits (2266), Expect = 0.000e+0 Identity = 420/474 (88.61%), Postives = 438/474 (92.41%), Query Frame = 0
Query: 27 MKRSRESIMCASQEDPLVMRSTWSITLFRSVNCCVVLFAGFILAALSNIDNIRGSRSWYTTTLSDIRAPMVPVAPFLLTDRESFKSEELHFSWKVDNQLEIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYVNLVNFLENGVWGGPDPQLENECQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVHDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLERLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLNKVLLNYLCPS 500
M SRES++C SQ+ P+ +RSTWS L S+ CC VL FILAA S R SR WY T + I+ PMVPVAPFLLTDR+SF+SEELH+ WKV+NQ EIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQY+NLVNFLENGVWGGPDPQLENE QWKG+ FYQGTNARFNGRE CDCYREEPA+RRGNIENRYYHNEVLDVWVTFF WFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTS+RSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWV+DVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLE+LAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWD LHFYAPVY GLNKVLLNYLCPS
Sbjct: 1 MSSSRESVLCDSQQAPVEVRSTWSKGLLWSITCCAVLVIAFILAAFSETGRTRASR-WYGTIIFKIKPPMVPVAPFLLTDRKSFESEELHYLWKVENQREIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSMRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVYDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLEQLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDGLHFYAPVYEGLNKVLLNYLCPS 473
BLAST of EWM25922.1 vs. NCBI_GenBank
Match: gi|553178354|ref|XP_005852543.1| (hypothetical protein NGA_0704500, partial [Nannochloropsis gaditana CCMP526] >gi|422295989|gb|EKU23288.1| hypothetical protein NGA_0704500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 317.005 bits (811), Expect = 5.323e-104 Identity = 146/163 (89.57%), Postives = 153/163 (93.87%), Query Frame = 0
Query: 176 IVMVGDSLTRYQYVNLVNFLENGVWGGPDPQLENECQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLL 338
++ ++ RYQY+NLVNFLENGVWGGPDPQLENE QWKG+ FYQGTNARFNGRE CDCYREEPA+RRGNIENRYYHNEVLDVWVTFF WFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLL
Sbjct: 3 LIPFNETFVRYQYLNLVNFLENGVWGGPDPQLENEFQWKGWLPFYQGTNARFNGREICDCYREEPAERRGNIENRYYHNEVLDVWVTFFQWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLL 165
BLAST of EWM25922.1 vs. NCBI_GenBank
Match: gi|552817289|ref|XP_005844900.1| (hypothetical protein CHLNCDRAFT_138448 [Chlorella variabilis] >gi|307104545|gb|EFN52798.1| hypothetical protein CHLNCDRAFT_138448 [Chlorella variabilis]) HSP 1 Score: 117.472 bits (293), Expect = 3.501e-25 Identity = 106/368 (28.80%), Postives = 141/368 (38.32%), Query Frame = 0
Query: 151 LVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYVNLVNFLENGVWGGP------DPQLENECQWKGYQRFYQGTNARFNGRETCDCYREE--------PADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVHDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYD--LERLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQR----QGISILDAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLNKVLLNYLC 498
L + G M+ + A CL K +V VGDSLTRYQY+ L+ FLE G W P P + NE W F +GT+A F GRE CDCYR E P ++ ENR++ V+ F + GH P GQTP C P C+Q W D+ VV L P ++ NSG WG D +A + + +V GRV+++TTT R P AP D + +G +LDA AIT P+ + N+ + WD H+ A VY LN LLN +C
Sbjct: 105 LSIRGCTMKRY-SHAEAKQCLAGKRLVFVGDSLTRYQYLALIYFLEKGEWPAPLGGVPGQPSVTNEHDW---NDFLRGTSALFGGRELCDCYRREYILGVTPRPPEKE-KFENRFFITADGATAVSHFTYTTAPHTVHGH-------------FGFPPHLMGQTP---------------------------------------------------CAPATCNQTADWAFDL--ALRRVVRPLQPTHVIINSGMWGSSNAFGDDKWRSIAAAGLYSVFEQLGRVIWRTTTAAR--GPRAPTRDHDALALKHTAAEGWGVLDAYAITRPLVKMLNKPM--------WDPRHYQAVVYRELNLYLLNMIC 391
BLAST of EWM25922.1 vs. NCBI_GenBank
Match: gi|1210530122|dbj|GAX11230.1| (hypothetical protein FisN_34Hu050 [Fistulifera solaris]) HSP 1 Score: 92.4337 bits (228), Expect = 7.443e-17 Identity = 97/389 (24.94%), Postives = 152/389 (39.07%), Query Frame = 0
Query: 122 DNQLEIAATTEANGARNVTGPGAGVAACTLVVDGYDMQSFEDRTAA-----LSCLRNKSIVMVGDSLTRYQYVNLVNFL-ENGVWGGPD--PQLENE-CQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWR--NLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVHDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDLERLA--QSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLNKVLLNYL 497
D L A E P A + D D SF + T L RN +I+ +GDSLTRYQY++LV FL NG W P+ P + E G+ +FY T + E CDC+RE + IENRYYH+ V + VT+ +++G+ P W +++E R Q E Q+ WV + ++ P P + +FN+G W +DL+ +A Q ++A++ N ++KTTT P+ + D ++RQ ++ D +D + + +WD LHF+ P+Y+ LN LL+ +
Sbjct: 34 DGGLPSAFIVEQAHINRQPSPFAEAFPSVNITDSLD--SFSNLTELVQLQNLPVPRNLNILFMGDSLTRYQYLDLVYFLSHNGTWPSPNDRPNMVMEKTHRNGWTQFYSFTKSALQPYEQCDCFRE--FNLTTLIENRYYHDPVRNNRVTYL------------------------------QKFGKLPFKSNWNVTEVHQEHRLVQS---------------------------------AAELNFLIQDADWVDAIRDFVCHLSP--KPSLFIFNAGLWRD----HDLKDVALQQKIVQALQACNIPSMFKTTTKPKTS-----AQPTWDEYERQLCNLTD--------YCMDVRWTALVPESYYWDWLHFHEPIYSMLNVQLLSMI 336
BLAST of EWM25922.1 vs. NCBI_GenBank
Match: gi|929750758|ref|XP_014150362.1| (hypothetical protein SARC_11039 [Sphaeroforma arctica JP610] >gi|906943083|gb|KNC76460.1| hypothetical protein SARC_11039 [Sphaeroforma arctica JP610]) HSP 1 Score: 87.0409 bits (214), Expect = 8.604e-15 Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 0
Query: 150 TLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYVNLVNFLENGVWGGPDPQLENECQ-------WK---GYQRFYQGTNARFNGRETCDCYREEPADRRGNI-ENRYYHNEVLDVWVTFFL 265
+LVVDG D + F R AL L K ++MVGDS RYQY+++ +LENG W PD E + + W+ G+++F+ TN+ NG E CDC+RE+ I ENRY H E +V VT+ +
Sbjct: 91 SLVVDGCDWRKFT-RKGALQILSGKHLIMVGDSRVRYQYLSMAFWLENGYW-PPDTYGEGDIKSPAKEGLWRDIGGWKQFFSDTNSYLNGEEECDCFREDKWPIENIIFENRYLHMEKYNVKVTYLM 215
BLAST of EWM25922.1 vs. NCBI_GenBank
Match: gi|553192159|ref|XP_005855524.1| (hypothetical protein NGA_0609100 [Nannochloropsis gaditana CCMP526] >gi|422293536|gb|EKU20836.1| hypothetical protein NGA_0609100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 73.559 bits (179), Expect = 1.299e-11 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 0
Query: 182 SLTRYQYVNLVNFLENGVWGGPDPQLENECQWKGYQR-------FYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWF--NPACGH 273
+L+RYQY++L+ +LE G W + E +KG R FY+ ++A F RE CDCYREE + ++ENRYY NE D+ V+F WF +P GH
Sbjct: 2 TLSRYQYLSLIRYLEEGAW---EATQEKTLTFKGASRLKETWNDFYRRSSAFFGVREVCDCYREE--GKAPHVENRYYVNEEKDLRVSFIGWFGNHPPRGH 97
BLAST of EWM25922.1 vs. NCBI_GenBank
Match: gi|1210522211|dbj|GAX18973.1| (hypothetical protein FisN_8Hh194 [Fistulifera solaris]) HSP 1 Score: 71.2478 bits (173), Expect = 7.166e-10 Identity = 77/326 (23.62%), Postives = 132/326 (40.49%), Query Frame = 0
Query: 172 RNKSIVMVGDSLTRYQYVNLVNFL-ENGVWGGPDPQ----LENECQWKGYQRFYQGTNARFNGRETCDCYREEPADRRGNIENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDRAPKRYGQTPDVDEWRNLYREGRHFQEKTSVRSDASAMPLTSTLHLLEEKEASSIPSRQRGCEPGACDQEPHWVHDVYGLFTNVVPLLNPDVLVFNSGHWGRLPGAYDL--ERLAQSAIEAVRVSNGRVVYKTTTWPRINDPFAPEDDLKDFFQRQGISILDAGAITYPVAALDNQLVSTQSTHLFWDRLHFYAPVYAGLN 490
RN +I+ +GDSL+RYQY++LV FL NG W PD LEN + G+ +F+ TNA E CDC+R A + +ENRY+++ + +++T+L +++G P W T V ++ + L S L + ++ W + + P P V +FN+G W +DL + Q ++A++ +YKTTT ++ D + D +++Q + D +D + + +WD HF P+Y+ +N
Sbjct: 89 RNLNILFMGDSLSRYQYLDLVYFLSHNGTWPSPDETPNMVLENTHK-HGWVQFFNFTNAALRPYEQCDCFRLHSAIKA--VENRYFYD-----------------AERNNSVTYL-------------QKFGMYPFKSSW-----------NVTDVYNEHELVQLPSGLSFVH--------------------KDLDWADAIRDFVCRMSP--KPSVFIFNAGIW----ADHDLVNVEMQQRIVDALQECQIVSMYKTTT--KMTD---QRNQTWDEYEQQLCKLTD--------HCMDLRWTAIVPEEHYWDTKHFREPIYSMMN 331
BLAST of EWM25922.1 vs. NCBI_GenBank
Match: gi|929755524|ref|XP_014152744.1| (hypothetical protein SARC_08736 [Sphaeroforma arctica JP610] >gi|906947695|gb|KNC78842.1| hypothetical protein SARC_08736 [Sphaeroforma arctica JP610]) HSP 1 Score: 71.633 bits (174), Expect = 7.826e-10 Identity = 51/153 (33.33%), Postives = 77/153 (50.33%), Query Frame = 0
Query: 150 TLVVDGYDMQSFEDRTAALSCLRNKSIVMVGDSLTRYQYVNLVNFLENGVWGGPDPQLE------NECQW---KGYQRFYQGTNARFNGRETCDCYREEPADRRGNI-ENRYYHNEVLDVWVTFFLWFNPACGHQGHNLTWLNVSVPPPRLDR 292
+L+V D Q + R A+ L+ K IV VGDS RYQYV ++ +LENG W PD + + E W G++ F++ T G E CDCYR + I ENR+Y+NE ++ +++F+ + GH + PP + D
Sbjct: 96 SLLVSECDWQKYT-RRGAIELLQGKHIVFVGDSRLRYQYVCMIFWLENGYW-PPDGEKDGFKSPVKESLWGGKGGWRAFFKDTAGYMKGNEYCDCYRNDHDMYVEPIYENRFYYNERYNLRLSYFVHYKTDMW-AGHKDIHGHYGFPPYQADE 245 The following BLAST results are available for this feature:
BLAST of EWM25922.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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