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Properties
| Property Name | Value |
|---|
| Product | nuclear receptor 2c2-associated protein |
| Orig transcript id | gnl|cribi|Naga_100134g4.9880.mrna |
| Orig protein id | gnl|cribi|Naga_100134g4.9880 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:251745..253001 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4751 ID=rna4751|Name=rna4751|organism=Nannochloropsis gaditana|type=mRNA|length=3042bp
GAGCACGTCGCTTCGTGTGCTTTTTCGTTCCTGCGTGACCGAGTTCGAGC
TTCCATGCAAAAAGAATTTTCGCCTGATCTTTTTCGTCTATCGGGTTATG
CAGGCGACCGAATCTGGTCACGTCGCTCGCGTGTGATGCCACGTGGTCCC
TTACAACGACTACAGACTACGCCTATCCATGCTCTCGTCAACTCCAAGTG
CAACCCGCGCAAGACTCACGGGTGAAGTGGGTGTTCTTGCATCCGGATGG
GCCTGGGCTTGCACTGCAGGCGACATATGGTGTCTTAAATGACTTCAACA
CCCGCCGGGAGAGGGAGCTAACAGGCAACCAGATGCCCTCCTAAGTCAGG
CCCGAAAGTGTCGTGCGTGACCTCCCCAGAATTCGACACGCTGTACCGTG
TGTACACAGCTACTGGTGTTCCATCCGGTGGAGTCATGGGGAACACCTCT
CCGGGACCGGGCTGAATTTTGGGGGAAAAATATTTGAGCTTGGGACCATC
TGCTCTCTTCGCGAGCTTCTCCAGCGTTTTCCTTGCATTTCAAGCAGCAC
TTCAACAGTCAATTACACCAAACACAGAACCCTGGCATACACGAAGTTAC
AGGCAGATTTTTGAGGTGTTATGCTTTTGGAGGTGTGCTGTGTGCTCACC
CCCCTCACCTCTTGCTTTTTCTACCTTTTCCCAACACAGCATTTCGCGTT
TTCGATCTGCGGATTGTTCTGCTTTCCCCCCTGCAGACGATGTCATTACG
CTGCTACATTTCAAGCCGGTCAAGAAGACTACAATCAATTATCGTCTCTC
TCCTACCATGCCTGTTAGTAACGAGAAGCGTGCAAGCATTAGTGACAGCG
CCATCTCTTCGAAGAGGTCCAGGCATGGCCGCTGCCTACCGCTCACCTAG
CGAAATAGCCGCTGCCCCCGCGATCCGACCCTCCTCTGACTCCCACAAAG
AGCACGTCCCCGTAGCCGACACGTTGACTTATTTGTCGCATCATTCGCCC
TCATCTTTCGACCTCCGCAGCCCTTATGTGCGCCTTGAAGTGCGGCCTGC
CAATCTTCAGGAATTAAATCTAGTGGTCGACATGCGAATGGAGGTATTTG
GTCCTGGGAAAGAAGCATCTACCGCGGGAAGTGCGTCCATTCCGAAACAC
ACAGGTCTCTCGGGCCCTTCAGAGGTGGAAGGAAGAGAAACGAAAGGAAG
AAGGGGCACAGCACCACCCGCCCCGGACATGTCTGCCGGATGGAAAGCCG
AGTCCTTGCAGAATTTGATTGCCCGGCAGTCAAAGGGCTCTGTGATATTT
GTGGTCACAGCCAGGGATGTCCGCCATCCGGACGCGCAGCCAGTATTGGT
GGCTTCGGTAGAGGCCAGCACGCATGAGTTCCACGAGGTGGGCTTCTCTC
CCTGCCTGGCGCAGGTCGAGGACGAGGAGGAGGATGGGGAGGGAGGGGAG
GAAGGAGCGGACGGATGGAGGTTACAGGGGGGATGGGACAGGGGTGCTGC
TGGATTCTGGGCTGGTATCCCGGGTGCGAGGGGCAGCAGTGTTGGCAAAG
CTTCCTGTTCAAGCTCTCAGCCGTCGGTGCTCCTTGCGCGCACCTCGTTC
CTTGACACCCCGCCCGAGAACAAAGGGACTGGCATACCGTCCCCAGCGCA
CGAGAGGAAACAATCGAAGCTCTACGTGACGGGGATGATGGTGGTGGATG
CCTTCCGTCGGCAAGGGGTGGCCGCCGCCCTCTTAACTGCCGTGGAGGAA
TACGCCCGCGGCCGGGGCATCAATTACATTTGTCTGTACGTCGATGCCTA
CAACTCATCGGCCCAACGACTCTATCAAAAATCCGGGTATCTGGTCGTTC
CCTTCTCCCCGCAGGCGGAAGCCTTTGCATCAAAGATCGGCTTGTACAAG
GGTGCGTATGCTGCCCGACAATACTCGTTCGCCTACCGGCGTTTGCCTCC
ACGGAGGGCCTTAGGAGGCGCCTGGCATGTGGGACAAGCCACGCGTGGCC
CCGCGTCCTTGGATGGACAGGACCCATTGCGTCTCCATTGGGCAGGGGGT
GGGGACGGCCCCGGGATGGGGCGGGAAGTGGATGGCAAGGGGGACGGGGG
GGCGGAGATGCAGGGGAGAGAAAGCCGAAGAGCCCCGCAGGCTGCGGAGG
AGGGTCGCTGGTGTGCCGGACCGAGGGAGGCTTGGAAAGAGCAGCCGTGT
GCATGGGGAAATCCCGGGCGAGAAAATGTAGTGTGGGAGGATCGCGGTAA
GTGTTTGGTCGGAGACGGTAATGGGAGGGATGCAGCCGAGGGGACGCGGA
CATTGAAAGGATCGAGGCGGATGTAAGGGTCAGGCGGGAGCCTCGACCAT
CCTAGGAAGCGATGATACGAGGCGTGTGTAGGAGATATGGCATTCCCGCC
TCGACCATCCTAGGAAGCGATGATACGAGGCGTGTGCAGGAGATATGGCG
CAGAGGAAAAATGCAGTCCGCCATAGCGGTTGAATAGCGGTGCTCATTAG
GAGCACGTGGGTGACGGAAAGGGAGAGGGTGTTTGACCAAAGGGTACTTC
GTACTCTGTGGAATTTGAATGATTCCCATGGGGGGGGTCCCATATCGCCC
TTCCACGAGGTTCGAATGGCCCCACGGGAGGCTCGAAGAGGGTGAATAGT
GATAACGTGTGGGAGGCCCATGGGAAATGTATGATGTTTGTGTCACTGTA
TATATGTAAAGTGGCCGTCAGGGTAAAGGGCCAGGAAGAAGCCTGAGGTC
GAGCAAGTGCCAGTCTTGTGGGCACATCGCGGAAAGCTGAATGAATCTCT
ATATAGAGGATGCGTGTGGGGTCGTGGGAGCGTGGCTTGCGCGTGTAGAT
GGTCCTGATACCGGCGTGCGGACAGGACGCCTGAGCATGGCGATGACAGG
GCAAAAGGACAGGTAATGTGCATTTTGTGCACACCATTGGAAGGGATAAG
AAAGCATAATGATGACGAATTGTGAATAAGAGGCGGGTTTCTCAGTTGAT
ATCTTATTATCGCCGACAGTGTACACTTTCCTTCACCATCCT back to topprotein sequence of rna4751 >rna4751-protein ID=rna4751-protein|Name=rna4751|organism=Nannochloropsis gaditana|type=polypeptide|length=241bp
MAFTDLSAPSTKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQ
WIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPI
APSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFY
PDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEE
GFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWGLEEDQAT back to topmRNA from alignment at CM002464.1:251745..253001- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4751 ID=rna4751|Name=rna4751|organism=Nannochloropsis gaditana|type=mRNA|length=1257bp|location=Sequence derived from alignment at CM002464.1:251745..253001- (Nannochloropsis gaditana)
TCTACGTCTCTGCCACACACACCCCGTACAGGAAGGAGTTTATCGGGTCG
GATGATTTGAGCCGCCAGAAGTGATGGCATTTACAGACTTAAGTGCGCCA
TCCACGAAAACCAAAGTCAAGTAAGTTACTCAACGAGGTTTTTGTTGAGA
CTGTTAGACATCATTTCTTGATTTCCTCGTTCTTCATTTTACTGTAGCTT
TTCCTCTTTACTCACACGAACAAAAACTTGATATTAGAGTTTCATCAGTC
TTGCATCGCAACGTGAGGGAGTTTGGTGCAGCACATATGTTCGATGGTAG
CTCGGATAGTTGCTGGAATTCAGATCAGGTCCGTGGCGGTATCAGCATCG
AGTATTTAAGTGACTATTTGATAAGTTCGCAAGGGGGCCATACTATTACC
TTCCAAGGCCCCTACACAGAGGCGCTCCCTCTCCGGATGGGTTTGGGACT
TCAGAAATATAATCAATTTTGCATTTAGGAGGCGTTTGAACACAAAAGTT
GCATCCTCATTTCCTTTCCCATTTGACAGGGAACACCACAATGGATTGTG
CTTCGTTTCCTGCGACCAGTCCTTGTATGCCGGTTGCTGCTCATGTTTCA
AGGCGGTTTCGCCGGCAAAGAAATGCAAGTGAGAGTCACATTTCATACTC
CACCCCTCTCTCGCGCCCCTCTTCCCGCCTCCTCTCCCATTGCTCCTTCC
GCTGACGCGGCCGCGACTCCCTGTGAACACGAGCACACCAGTCCACCGCC
GTCAAAGCCCCGGACGTCGGTGGTAAACGGGAAGGATTCCTCCACAACCC
TACCGATGAAAAGTCGCCCCATGCTGGTGGGGACGTTTTACCCCGATGAC
GACAACAAATCACAGTCCTTTGAACTGACCGCGGCCATCAGGGCAGCTGC
ACAAGAACGAGAAGCATCGGTGCGAGGGGCAGAACGTGACGAAGATATCA
GGACATATCATCATGACAGAGGCCCCGAAGAAGGCGAGGAAGGGTTTGAC
TGTATGTGTAAGGTGGTGGAAATGAAGCTGACTTTTAACGGCAGCTCGGA
CTTTTACGGTCGCGTGACGCTCTATCGCTTGGCTGTCTGGGGCCTTGAGG
AGGACCAAGCGACGTAGCATGAAAGCAAAAATTTGATTGAAATGATTGGG
ATGGCTTGGACTTGGCGTACTCTCCTCGCCTCCCCTCGAGCGACATAATT
AGAGAGGATGGTGAAGGAAAGTGTACACTGTCGGCGATAATAAGATATCA
ACTGAGA back to topCoding sequence (CDS) from alignment at CM002464.1:251745..253001- >rna4751 ID=rna4751|Name=rna4751|organism=Nannochloropsis gaditana|type=CDS|length=2178bp|location=Sequence derived from alignment at CM002464.1:251745..253001- (Nannochloropsis gaditana)
GGAACACCACAATGGATTGTGCTTCGTTTCCTGCGACCAGTCCTTGTATG
CCGGTTGCTGCTCATGTTTCAAGGCGGTTTCGCCGGCAAAGAAATGCAAG
TGAGAGTCACATTTCATACTCCACCCCTCTCTCGCGCCCCTCTTCCCGCC
TCCTCTCCCATTGCTCCTTCCGCTGACGCGGCCGCGACTCCCTGTGAACA
CGAGCACACCAGTCCACCGCCGTCAAAGCCCCGGACGTCGGTGGTAAACG
GGAAGGATTCCTCCACAACCCTACCGATGAAAAGTCGCCCCATGCTGGTG
GGGACGTTTTACCCCGATGACGACAACAAATCACAGTCCTTTGAACTGAC
CGCGGCCATCAGGGCAGCTGCACAAGAACGAGAAGCATCGGTGCGAGGGG
CAGAACGTGACGAAGATATCAGGACATATCATCATGACAGAGGCCCCGAA
GAAGGCGAGGAAGGGTTTGACTGTATGTGTAAGGTGGTGGAAATGAAGCT
GACTTTTAACGGCAGCTCGGACTTTTACGGTCGCGTGACGCTCTATCGCT
TGGCTGTCTGGGGCCTTGAGGAGGACCAAGCGACGTAGAGTTTCATCAGT
CTTGCATCGCAACGTGAGGGAGTTTGGTGCAGCACATATGTTCGATGGTA
GCTCGGATAGTTGCTGGAATTCAGATCAGATGGCATTTACAGACTTAAGT
GCGCCATCCACGAAAACCAAAGTCAAGGAACACCACAATGGATTGTGCTT
CGTTTCCTGCGACCAGTCCTTGTATGCCGGTTGCTGCTCATGTTTCAAGG
CGGTTTCGCCGGCAAAGAAATGCAAGTGAGAGTCACATTTCATACTCCAC
CCCTCTCTCGCGCCCCTCTTCCCGCCTCCTCTCCCATTGCTCCTTCCGCT
GACGCGGCCGCGACTCCCTGTGAACACGAGCACACCAGTCCACCGCCGTC
AAAGCCCCGGACGTCGGTGGTAAACGGGAAGGATTCCTCCACAACCCTAC
CGATGAAAAGTCGCCCCATGCTGGTGGGGACGTTTTACCCCGATGACGAC
AACAAATCACAGTCCTTTGAACTGACCGCGGCCATCAGGGCAGCTGCACA
AGAACGAGAAGCATCGGTGCGAGGGGCAGAACGTGACGAAGATATCAGGA
CATATCATCATGACAGAGGCCCCGAAGAAGGCGAGGAAGGGTTTGACTGT
ATGTGTAAGGTGGTGGAAATGAAGCTGACTTTTAACGGCAGCTCGGACTT
TTACGGTCGCGTGACGCTCTATCGCTTGGCTGTCTGGGGCCTTGAGGAGG
ACCAAGCGACGTAGAGTTTCATCAGTCTTGCATCGCAACGTGAGGGAGTT
TGGTGCAGCACATATGTTCGATGGTAGCTCGGATAGTTGCTGGAATTCAG
ATCAGATGGCATTTACAGACTTAAGTGCGCCATCCACGAAAACCAAAGTC
AAGGAACACCACAATGGATTGTGCTTCGTTTCCTGCGACCAGTCCTTGTA
TGCCGGTTGCTGCTCATGTTTCAAGGCGGTTTCGCCGGCAAAGAAATGCA
AGTGAGAGTCACATTTCATACTCCACCCCTCTCTCGCGCCCCTCTTCCCG
CCTCCTCTCCCATTGCTCCTTCCGCTGACGCGGCCGCGACTCCCTGTGAA
CACGAGCACACCAGTCCACCGCCGTCAAAGCCCCGGACGTCGGTGGTAAA
CGGGAAGGATTCCTCCACAACCCTACCGATGAAAAGTCGCCCCATGCTGG
TGGGGACGTTTTACCCCGATGACGACAACAAATCACAGTCCTTTGAACTG
ACCGCGGCCATCAGGGCAGCTGCACAAGAACGAGAAGCATCGGTGCGAGG
GGCAGAACGTGACGAAGATATCAGGACATATCATCATGACAGAGGCCCCG
AAGAAGGCGAGGAAGGGTTTGACTGTATGTGTAAGGTGGTGGAAATGAAG
CTGACTTTTAACGGCAGCTCGGACTTTTACGGTCGCGTGACGCTCTATCG
CTTGGCTGTCTGGGGCCTTGAGGAGGACCAAGCGACGTAGAGTTTCATCA
GTCTTGCATCGCAACGTGAGGGAGTTTGGTGCAGCACATATGTTCGATGG
TAGCTCGGATAGTTGCTGGAATTCAGATCAGATGGCATTTACAGACTTAA
GTGCGCCATCCACGAAAACCAAAGTCAA back to top
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