EWM25921.1, cds4739 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25921.1 vs. NCBI_GenBank
Match: gi|585107792|gb|EWM25921.1| (nuclear receptor 2c2-associated protein [Nannochloropsis gaditana]) HSP 1 Score: 502.671 bits (1293), Expect = 3.198e-180 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0 Query: 1 MAFTDLSAPSTKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWGLEEDQAT 241 MAFTDLSAPSTKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWGLEEDQAT Sbjct: 1 MAFTDLSAPSTKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWGLEEDQAT 241
BLAST of EWM25921.1 vs. NCBI_GenBank
Match: gi|553184918|ref|XP_005854168.1| (nuclear receptor 2c2-associated protein [Nannochloropsis gaditana CCMP526] >gi|553185588|ref|XP_005854271.1| nuclear receptor 2c2-associated protein [Nannochloropsis gaditana CCMP526] >gi|422294789|gb|EKU22089.1| nuclear receptor 2c2-associated protein [Nannochloropsis gaditana CCMP526] >gi|422294891|gb|EKU22191.1| nuclear receptor 2c2-associated protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 500.36 bits (1287), Expect = 3.311e-179 Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 0 Query: 1 MAFTDLSAPSTKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWGLEEDQAT 241 MAFTDLSAPSTKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTL MKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWGLEEDQAT Sbjct: 1 MAFTDLSAPSTKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLQMKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWGLEEDQAT 241
BLAST of EWM25921.1 vs. NCBI_GenBank
Match: gi|957857880|ref|XP_014678117.1| (PREDICTED: nuclear receptor 2C2-associated protein-like [Priapulus caudatus]) HSP 1 Score: 99.3673 bits (246), Expect = 9.347e-23 Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 0 Query: 14 KVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQV 80 +V VSSVL+RNV+EFG + DGS ++CWNSD+G PQW++LRFL PVL+ RL + FQGGFAG+E + Sbjct: 10 RVSVSSVLNRNVKEFGKQFLIDGSDETCWNSDEGLPQWVLLRFLHPVLIARLCVRFQGGFAGRECHL 76
BLAST of EWM25921.1 vs. NCBI_GenBank
Match: gi|1183340650|gb|ORX69603.1| (hypothetical protein DL89DRAFT_223864 [Linderina pennispora]) HSP 1 Score: 97.4413 bits (241), Expect = 4.982e-22 Identity = 64/222 (28.83%), Postives = 93/222 (41.89%), Query Frame = 0 Query: 13 TKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWG 234 +K KVSSVL+R+ + FG AH+FD S ++CWNSDQG+PQ+I++ F +PV + +L+ FQGGF GK++++ A AA C Y DD+NK QSF++ +E +V G R +K+ FN S+DFYGR+ +Y L G Sbjct: 9 SKCKVSSVLNRDAKSFGKAHLFDASLETCWNSDQGSPQYILVEFAQPVKINSVLIQFQGGFVGKDIEL---------------------IDAIKAAKIC------------------------------------NLYADDNNKLQSFDV---------PQEEAVIGRSR----------------------------IKILFNQSTDFYGRIVIYSLDFVG 136
BLAST of EWM25921.1 vs. NCBI_GenBank
Match: gi|698817734|ref|XP_009841896.1| (hypothetical protein H257_15476 [Aphanomyces astaci] >gi|574103127|gb|ETV68671.1| hypothetical protein H257_15476 [Aphanomyces astaci]) HSP 1 Score: 93.5893 bits (231), Expect = 1.904e-20 Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 0 Query: 6 LSAPSTKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPAS 97 L+ +T T +VSSVL+R+ + +GA HMFDG+ +CWNSDQGTPQ ++L F R V + ++ +MFQGGF G+++Q VT P LP S Sbjct: 4 LTGAATPTTCRVSSVLNRDRKAYGAQHMFDGTDVTCWNSDQGTPQQVLLSFHRHVHIRQVHVMFQGGFVGEDVQFLVTTMESPTEFHALPVS 95
BLAST of EWM25921.1 vs. NCBI_GenBank
Match: gi|951569858|ref|XP_014483300.1| (PREDICTED: nuclear receptor 2C2-associated protein [Dinoponera quadriceps]) HSP 1 Score: 92.4337 bits (228), Expect = 3.580e-20 Identity = 60/223 (26.91%), Postives = 88/223 (39.46%), Query Frame = 0 Query: 11 TKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVW 233 K + +VSSVL++NVR +G HMFD S+++CWNSD GTPQW+++ F + + FQGGFAGKE + C ++T ++V FYP+D N Q F L I+A RT +K FN S+DF+GR+ +Y L+++ Sbjct: 8 NKFECRVSSVLNKNVRSYGKKHMFDDSNETCWNSDAGTPQWVIINFEEECSLSSFEIEFQGGFAGKECYLE---------------------------AGCNEKNT---------------------------VVVEAFYPEDVNNLQRFNLANKIKA------------------RT----------------------LKFVFNQSTDFFGRIIIYNLSLY 136
BLAST of EWM25921.1 vs. NCBI_GenBank
Match: gi|765551230|gb|KJE91851.1| (hypothetical protein CAOG_009598 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 93.5893 bits (231), Expect = 3.951e-20 Identity = 62/218 (28.44%), Postives = 97/218 (44.50%), Query Frame = 0 Query: 15 VKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAV 232 V+VSSVL+R+ ++FG M DG D+CWNSDQG Q + + +PV + + +MFQGGF G ++ V S A A++ ++PS +++ P + D+ST + ++ T YP+D+N Q F ++QE V M+ F S+DF+GRVT+YRL + Sbjct: 14 VRVSSVLNRDAKQFGKQFMLDGRDDTCWNSDQGKSQTVSIELDQPVTIAGVRIMFQGGFVGNRCRIEV-----ERSPAQQEAAAGVSPSGESSLASSASASEQPGLA---------NDASTGSTTARKYDVLCTIYPEDNNTLQEFPF-----PSSQE-----------------------------------VQRMRFVFEASTDFFGRVTVYRLEL 177
BLAST of EWM25921.1 vs. NCBI_GenBank
Match: gi|1183426781|gb|ORY51082.1| (galactose-binding like protein [Rhizoclosmatium globosum]) HSP 1 Score: 91.2781 bits (225), Expect = 1.569e-19 Identity = 66/225 (29.33%), Postives = 92/225 (40.89%), Query Frame = 0 Query: 10 STKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVWG 234 ST+ KVKVSS L+++ + FG ++ DGS ++CWNSDQGT QWI++ +P + L LMFQGGF E+QV F P LP+SS S + VG+ YP+D NK Q+ L GE G K +K+ F+ D YGR+ LY++ + G Sbjct: 7 STEFKVKVSSTLNKDSKSFGKQYLTDGSDETCWNSDQGTSQWIIIELPQPSSISHLHLMFQGGFTSSEVQV---FAAP---TGTLPSSS------------------------------------------SEWIDVGSVYPEDSNKEQALAL-----------------------------------GEAGVG--IKAQSVKIVFSKPGDTYGRIVLYKVDLVG 146
BLAST of EWM25921.1 vs. NCBI_GenBank
Match: gi|759034221|ref|XP_011332601.1| (PREDICTED: nuclear receptor 2C2-associated protein [Ooceraea biroi] >gi|607368444|gb|EZA62557.1| Nuclear receptor 2C2-associated protein [Ooceraea biroi]) HSP 1 Score: 90.5077 bits (223), Expect = 1.894e-19 Identity = 58/223 (26.01%), Postives = 83/223 (37.22%), Query Frame = 0 Query: 11 TKTKVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKEMQVRVTFHTPPLSRAPLPASSPIAPSADAAATPCEHEHTSPPPSKPRTSVVNGKDSSTTLPMKSRPMLVGTFYPDDDNKSQSFELTAAIRAAAQEREASVRGAERDEDIRTYHHDRGPEEGEEGFDCMCKVVEMKLTFNGSSDFYGRVTLYRLAVW 233 K + +VSSVL++N+R +G HMFD S+++CWNSD GTPQWIV+ F V + FQGGF GK+ + G D T +V F P+D N Q F+L I+A + K FN S+DF+GR+ +Y L+++ Sbjct: 8 NKFECRVSSVLNKNIRSYGKNHMFDDSAETCWNSDAGTPQWIVINFEEECTVSSFEIEFQGGFVGKDCHIEA-----------------------------------------------GNDEKNT-------TIVEAFNPEDRNNLQKFKLKDQIKAKS----------------------------------------FKFVFNQSTDFFGRIIIYNLSLY 136
BLAST of EWM25921.1 vs. NCBI_GenBank
Match: gi|926607275|ref|XP_013794925.1| (PREDICTED: nuclear receptor 2C2-associated protein-like [Limulus polyphemus]) HSP 1 Score: 90.1225 bits (222), Expect = 3.132e-19 Identity = 36/64 (56.25%), Postives = 52/64 (81.25%), Query Frame = 0 Query: 14 KVKVSSVLHRNVREFGAAHMFDGSSDSCWNSDQGTPQWIVLRFLRPVLVCRLLLMFQGGFAGKE 77 K++VSSVL+R+V++FG ++ DG+ D+CWNSDQG+PQWI + F +PV + +L L FQGGF GK+ Sbjct: 11 KIRVSSVLNRDVKQFGKQYLTDGNDDTCWNSDQGSPQWISVIFSKPVKIEKLQLQFQGGFVGKD 74 The following BLAST results are available for this feature:
BLAST of EWM25921.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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