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Properties
| Property Name | Value |
|---|
| Product | Alpha/beta hydrolase fold-1 |
| Orig transcript id | gnl|cribi|Naga_100721g1.2303.mrna |
| Orig protein id | gnl|cribi|Naga_100721g1.2303 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:226543..227899 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4740 ID=rna4740|Name=rna4740|organism=Nannochloropsis gaditana|type=mRNA|length=1733bp
CGTCATCATCAACCAGCTCGCTAGGACCTTGGACCTGGTCTTTAGCCACC
ATGGGTAACAGAACCTGCTCATGCATTACGGATGAAATAAAGCGAGTTCA
GGTAACCTGTGTGATATATCAGCCACAGCATCCACTTTCCCCTTCGAAAT
AAGATTGGACCTGTGAAAACTATTTCCTCCAAGAGAAAATTATATAAGAT
CCCTTGGAAAATTAACCTCCTCCCATGCTAGGTCGTGCGTCGTCTCAAAG
AAACGGGCAATTAAGCGTTTCATGGGGTCACCCCCGCAGTCCTCCTCGTT
TCCGCAGGCCTATTGTTGAGAGCGAATCCTACACATGCTCCGCTGCCTCA
AAAGAATTAGTCAAATGCCTCTCGTGCGGGTTTTGTACATGAGCACGCGT
CTGTCGTGGTCAACCTCCCCTGAAGCTTTGGTCACCGTCCCGGGCCTTTT
TTTATCACGAAGAGAGTTGGAGCATGCAATTTCTGGCCGCGCGCATCGAG
AAAGCACGAAAAATTGATACGTACCTCAATATTGATGTGTAGGGAATCAG
CCCGGGCGTGATTGAAAGCTTGTGCATAGCTTGCCTTAGAGTCCGGTGGC
ACGCTCGAAAAGTCACAGATGATACCGGCATCGGGAATTATCATTTCTCC
CGCAACCACACGCATCGGCTGGGTTGGGGTTGGTATTATGGGCTGTTCCA
TGGTGACCCATCTCCTCAATGCGGGGTACCAGTGCACAGTCTATAACCGG
ACGCCGAGTAAGTGCCTTCCCGTTCAAGCCAAGGGTGCGGTAGTGGCAAG
CTCCCCCCACGCAGTCGCTGCTGCCTCTGACGTTGTCTTCGTCATCGTTG
GGTTCCCTTCAGACGTTCGAAACGTCGTTTTGGGCACGGAGGGCATTTTG
AAAGGGTTGAAAGCTGGCGGTGTCCTGGTCGATTGCACGACAAGCACACC
CAGCCTGGCCCAAGAGATATACACCACAGGGCAGGCGCAAGGAGTGTCCA
CCGTGGACGCACCCGTCTCCGGGGGTGACGTAGGCGCCCGCAATGCCGCC
TTGTCATTTATGGTGGGGGGGGACAAACAGGTCGTCGACGGCCTGCACCC
GTTGTGGACATTAATGGGCAAAAACATGCGGTACATGGGCGGGCCGGGAA
AAGGACAGCACACCAAGATGGTGAACCAGATATTGATCGCCAATACCATG
ATGGGTGTCTGCGAAGGGCTCATGTACGCCGAGAAGGCGGGTCTGGACCT
GACTGAGACGATCAACGCCGTGGGTGCCGGCGCGGCGGGGAGCTTTAGCA
TCAACAATTTGGGGCCGCGTATGGTGGCCCGCGACTTTGCCCCCGGTTTC
TACGTGGAACATTTTCTCAAGGACCTAGGCATCGCCTTGGACGAAGCACG
GCGGATGGACCTGGCGGTCCCGGGCATGGCTGCTGCCTACCAGATGTATG
TAGCCTTGAAAGCGCAGGGAGGGGGGAGGTTGGGGACACAAGCCTTGCTT
CTGGCCTTGGAGCGATTGAATGGGAAGGAAGGGGTGGAGCGATTGAATGG
GAAGGAAGGGGAGGCGGGGAAAGGGAAGTGATAAGGGGGAGGAAGGCCCG
TGGGGGAGGTGTGGAGCACAATTACTGTGATGGATGAACAGAGGCTCGGG
GGCCAGATGGAAGCTGCCAGGGCAATTTGGAAGGCAAACGGGCACAGGGC
TCTCAGATTTCATTGCAACTACGAGATTCTTCC back to topprotein sequence of rna4740 >rna4740-protein ID=rna4740-protein|Name=rna4740|organism=Nannochloropsis gaditana|type=polypeptide|length=295bp
MFARMRGADWLPLCFFLIGPVLRTQAFSSPCLPCRDPTFPSSPSLPSFSS
FCTVFSPPHAFVRPTASSSIQPYHPRHQRPTLQPCGHGIFPFLPPSRPPA
TSAPQGLPPLPSSPSSTSSSHPPVLLLHGFDSSCLEYRRLHPLLSPYLDA
YAVDMMGWGFSQLRGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGG
AAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSK
ALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYMLR back to topmRNA from alignment at CM002464.1:226543..227899+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4740 ID=rna4740|Name=rna4740|organism=Nannochloropsis gaditana|type=mRNA|length=1357bp|location=Sequence derived from alignment at CM002464.1:226543..227899+ (Nannochloropsis gaditana)
ATGTTTGCCAGGATGCGCGGTGCTGACTGGCTGCCATTGTGTTTTTTCCT
GATTGGCCCCGTGCTTCGAACGCAGGCgttttcctccccatgctTGCCAT
GTCGGGACccgaccttcccctcctctccgtccctcccctccttttcctcc
ttttgcaCCGTCTTTAGCCCTCCTCACGCCTTCGTCCGTCCTacggcgtc
ctcgtccatacAACCGTATCATCCACGGCACCAACGACCAACTTTGCAgg
ttctttcctcttcctcctcctccaccccaaaTCGGCCATATGATGAAGGT
TTTTCCCATGGCTTTGAGGATGTCCCTCAACGATTTCTCGATGAGATCGA
AGAGATAGCCTGCAGAGACATGCTTCAAGGTGGGCTTCAACATGACTTCT
ATTTCTGTCTTGATCGTACATGCCTCGTCATACGTTTCCCTTCCAGGTCT
TCAGTACCACCTCCCATGTCTATGCCACTCACCACCCTGTCTGTCGCGCA
CATTTCCACCCGTGCGTTCGCGAGGCACACCGCGAAGACATCACACACAT
TCTcaacccctccatcctgtctttgcccctccttgtcacctCGTACACAG
CCATGCGGTCATGGGATCTTCCCGTTTCTACCTCCATCTCGCCCACCGGC
TACGTCCGCGCCACAGGGgttgcccccccttccttcctccccctcctcca
cctcctcctcccaccctcccgtcctccttctccacggcTTCGATTCTTCC
TGTCTGGAGTACcgacgcctccatcccctcctctctccctatTTGGACGC
TTATGCAGTAGATATGATGGGGTGGGGGTTCAGTCAACTCCGAGGGGTGC
AAGATTTCTCCGCAGAGGCCAAACGCGAATATTTGCACGCGTTCTGGGTG
CACGTCCTCAAAGAACGCCCGATGGTCTTGGTGGGTGCCTCCTTGGGAGG
TGCGGCCGCCGTGGATTTTGCCCACACCTACCCGGAAGCCGTTAAAAAAC
TGGTCTTGATCGACGCACAGGTATGAAGCCCCCCCGTGAGGGACTTGGTG
CAGGATCCAGCTGACGCCATAccctctctcgctccctccctctttccctt
cttccctccctacctccctccctccctccctcccgcaggtCTACATCGAC
GGCGTGGGCCCCATGGCCTCgttcccgcctcccctcgccgCGCTGGGCAT
CCGAGTCCTGCAGTCCAAAGCCCTCCGGTCGTACGCAGGCACCCTCTCCT
ACCACGACGCGCCCTTGTATTCCACCCGCGACGCCATGCACATCGGGCGC
TTGCACACCCACCGGGACGGTTGGGACGAGGCCAGTGTCCGTTACATGCT
GAGGTAA back to topCoding sequence (CDS) from alignment at CM002464.1:226543..227899+ >rna4740 ID=rna4740|Name=rna4740|organism=Nannochloropsis gaditana|type=CDS|length=2664bp|location=Sequence derived from alignment at CM002464.1:226543..227899+ (Nannochloropsis gaditana)
ATGTTTGCCAGGATGCGCGGTGCTGACTGGCTGCCATTGTGTTTTTTCCT
GATTGGCCCCGTGCTTCGAACGCAGGCgttttcctccccatgctTGCCAT
GTCGGGACccgaccttcccctcctctccgtccctcccctccttttcctcc
ttttgcaCCGTCTTTAGCCCTCCTCACGCCTTCGTCCGTCCTacggcgtc
ctcgtccatacAACCGTATCATCCACGGCACCAACGACCAACTTTGCAgC
CATGCGGTCATGGGATCTTCCCGTTTCTACCTCCATCTCGCCCACCGGCT
ACGTCCGCGCCACAGGGgttgcccccccttccttcctccccctcctccac
ctcctcctcccaccctcccgtcctccttctccacggcTTCGATTCTTCCT
GTCTGGAGTACcgacgcctccatcccctcctctctccctatTTGGACGCT
TATGCAGTAGATATGATGGGGTGGGGGTTCAGTCAACTCCGAGGGGTGCA
AGATTTCTCCGCAGAGGCCAAACGCGAATATTTGCACGCGTTCTGGGTGC
ACGTCCTCAAAGAACGCCCGATGGTCTTGGTGGGTGCCTCCTTGGGAGGT
GCGGCCGCCGTGGATTTTGCCCACACCTACCCGGAAGCCGTTAAAAAACT
GGTCTTGATCGACGCACAGgtCTACATCGACGGCGTGGGCCCCATGGCCT
CgttcccgcctcccctcgccgCGCTGGGCATCCGAGTCCTGCAGTCCAAA
GCCCTCCGGTCGTACGCAGGCACCCTCTCCTACCACGACGCGCCCTTGTA
TTCCACCCGCGACGCCATGCACATCGGGCGCTTGCACACCCACCGGGACG
GTTGGGACGAGGCCAGTGTCCGTTACATGCTGAGGTAAATGTTTGCCAGG
ATGCGCGGTGCTGACTGGCTGCCATTGTGTTTTTTCCTGATTGGCCCCGT
GCTTCGAACGCAGGCgttttcctccccatgctTGCCATGTCGGGACccga
ccttcccctcctctccgtccctcccctccttttcctccttttgcaCCGTC
TTTAGCCCTCCTCACGCCTTCGTCCGTCCTacggcgtcctcgtccatacA
ACCGTATCATCCACGGCACCAACGACCAACTTTGCAgCCATGCGGTCATG
GGATCTTCCCGTTTCTACCTCCATCTCGCCCACCGGCTACGTCCGCGCCA
CAGGGgttgcccccccttccttcctccccctcctccacctcctcctccca
ccctcccgtcctccttctccacggcTTCGATTCTTCCTGTCTGGAGTACc
gacgcctccatcccctcctctctccctatTTGGACGCTTATGCAGTAGAT
ATGATGGGGTGGGGGTTCAGTCAACTCCGAGGGGTGCAAGATTTCTCCGC
AGAGGCCAAACGCGAATATTTGCACGCGTTCTGGGTGCACGTCCTCAAAG
AACGCCCGATGGTCTTGGTGGGTGCCTCCTTGGGAGGTGCGGCCGCCGTG
GATTTTGCCCACACCTACCCGGAAGCCGTTAAAAAACTGGTCTTGATCGA
CGCACAGgtCTACATCGACGGCGTGGGCCCCATGGCCTCgttcccgcctc
ccctcgccgCGCTGGGCATCCGAGTCCTGCAGTCCAAAGCCCTCCGGTCG
TACGCAGGCACCCTCTCCTACCACGACGCGCCCTTGTATTCCACCCGCGA
CGCCATGCACATCGGGCGCTTGCACACCCACCGGGACGGTTGGGACGAGG
CCAGTGTCCGTTACATGCTGAGGTAAATGTTTGCCAGGATGCGCGGTGCT
GACTGGCTGCCATTGTGTTTTTTCCTGATTGGCCCCGTGCTTCGAACGCA
GGCgttttcctccccatgctTGCCATGTCGGGACccgaccttcccctcct
ctccgtccctcccctccttttcctccttttgcaCCGTCTTTAGCCCTCCT
CACGCCTTCGTCCGTCCTacggcgtcctcgtccatacAACCGTATCATCC
ACGGCACCAACGACCAACTTTGCAgCCATGCGGTCATGGGATCTTCCCGT
TTCTACCTCCATCTCGCCCACCGGCTACGTCCGCGCCACAGGGgttgccc
ccccttccttcctccccctcctccacctcctcctcccaccctcccgtcct
ccttctccacggcTTCGATTCTTCCTGTCTGGAGTACcgacgcctccatc
ccctcctctctccctatTTGGACGCTTATGCAGTAGATATGATGGGGTGG
GGGTTCAGTCAACTCCGAGGGGTGCAAGATTTCTCCGCAGAGGCCAAACG
CGAATATTTGCACGCGTTCTGGGTGCACGTCCTCAAAGAACGCCCGATGG
TCTTGGTGGGTGCCTCCTTGGGAGGTGCGGCCGCCGTGGATTTTGCCCAC
ACCTACCCGGAAGCCGTTAAAAAACTGGTCTTGATCGACGCACAGgtCTA
CATCGACGGCGTGGGCCCCATGGCCTCgttcccgcctcccctcgccgCGC
TGGGCATCCGAGTCCTGCAGTCCAAAGCCCTCCGGTCGTACGCAGGCACC
CTCTCCTACCACGACGCGCCCTTGTATTCCACCCGCGACGCCATGCACAT
CGGGCGCTTGCACACCCACCGGGACGGTTGGGACGAGGCCAGTGTCCGTT
ACATGCTGAGGTAA back to top
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