EWM25946.1, cds4728 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25946.1 vs. NCBI_GenBank
Match: gi|585107821|gb|EWM25946.1| (Alpha/beta hydrolase fold-1 [Nannochloropsis gaditana]) HSP 1 Score: 592.423 bits (1526), Expect = 0.000e+0 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
Query: 1 MFARMRGADWLPLCFFLIGPVLRTQAFSSPCLPCRDPTFPSSPSLPSFSSFCTVFSPPHAFVRPTASSSIQPYHPRHQRPTLQPCGHGIFPFLPPSRPPATSAPQGLPPLPSSPSSTSSSHPPVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQLRGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYMLR 295
MFARMRGADWLPLCFFLIGPVLRTQAFSSPCLPCRDPTFPSSPSLPSFSSFCTVFSPPHAFVRPTASSSIQPYHPRHQRPTLQPCGHGIFPFLPPSRPPATSAPQGLPPLPSSPSSTSSSHPPVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQLRGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYMLR
Sbjct: 1 MFARMRGADWLPLCFFLIGPVLRTQAFSSPCLPCRDPTFPSSPSLPSFSSFCTVFSPPHAFVRPTASSSIQPYHPRHQRPTLQPCGHGIFPFLPPSRPPATSAPQGLPPLPSSPSSTSSSHPPVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQLRGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYMLR 295
BLAST of EWM25946.1 vs. NCBI_GenBank
Match: gi|553194813|ref|XP_005856033.1| (hypothetical protein NGA_0515200 [Nannochloropsis gaditana CCMP526] >gi|422293025|gb|EKU20326.1| hypothetical protein NGA_0515200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 325.865 bits (834), Expect = 1.749e-108 Identity = 197/281 (70.11%), Postives = 201/281 (71.53%), Query Frame = 0
Query: 1 MFARMRGADWLPLCFFLIGPVLRTQAFSSPCLPCRDPTFPSSPSLPSFSSFCTVFSPPHAFVRPTASSSIQPYHPRHQRPTLQPCGHGIFPFLPPSRPPATSAPQGLPPLPSS----------------------PSSTSSS-----------------------HPPVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQLRGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFP 236
MFARMRGADWLPLCFFLIGPVLRTQAFSSPCLPCRDPTFPSSPSLPSFSSFCTVFSPPHAFVRPTASSSIQPYHPRHQRPTLQ P+RP G +P P STS S HPPVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQLRGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQ + + P
Sbjct: 1 MFARMRGADWLPLCFFLIGPVLRTQAFSSPCLPCRDPTFPSSPSLPSFSSFCTVFSPPHAFVRPTASSSIQPYHPRHQRPTLQVLSSSSS--STPNRPYDEGFSHGFEDVPQRFLDEIEEIACRDMLQAMRSWDLPVSTSISPTGYVRATGVAPLPSSPSSTSSSHPPVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQLRGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQTVREAAQRLGRAP 279
BLAST of EWM25946.1 vs. NCBI_GenBank
Match: gi|298708653|emb|CBJ26140.1| (Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily [Ectocarpus siliculosus]) HSP 1 Score: 210.69 bits (535), Expect = 2.615e-62 Identity = 109/187 (58.29%), Postives = 133/187 (71.12%), Query Frame = 0
Query: 110 LPSSPSSTSSSHPPVLLLHGFDSSCLEYRRLHPLLSPY-LDAYAVDMMGWGFSQLRG--VQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYM 293
+ + S+ P+L+LHGFDSS LE+RRL P L +AYAVD++GWGF+ L ++ F AEAKR +L AFW + RPMVLVGASLGGA A+DFAH +PEAVKKLVLIDAQ +IDG GP AS P PLA LGI VL SK LRS A +SY D L +T DA+ +GRLHT DGW +AS++YM
Sbjct: 22 VQTDESTGKQGEDPILMLHGFDSSLLEFRRLLPKLGELGAEAYAVDVLGWGFTDLASGEIKSFGAEAKRTHLKAFWQQAMGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKLGISVLGSKPLRSLANQMSYTDKSL-ATEDAVRVGRLHTMCDGWADASLQYM 207
BLAST of EWM25946.1 vs. NCBI_GenBank
Match: gi|308807701|ref|XP_003081161.1| (Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) (ISS) [Ostreococcus tauri] >gi|116059623|emb|CAL55330.1| Alpha/beta hydrolase fold-1 [Ostreococcus tauri] >gi|1199293885|gb|OUS48967.1| Alpha/Beta hydrolase protein [Ostreococcus tauri]) HSP 1 Score: 201.06 bits (510), Expect = 6.546e-59 Identity = 99/178 (55.62%), Postives = 132/178 (74.16%), Query Frame = 0
Query: 118 SSSHPPVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQLR--GVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYM 293
SS PP +LLHGFDSSCLEYRRL P L+ + +A+D++GWGF+ GV D+S EAKR +L+AFW +K RPMVL GASLGGAAA+DFA +PEAV+KLVLIDAQ +I+G+GPM + P P+A +G+ VL++ LRS A L+Y+D Y+T DA+ +GRLHT W +A++ +M
Sbjct: 92 GSSAPPFVLLHGFDSSCLEYRRLLPKLATRAETWAIDLLGWGFTDAGDGGVGDYSPEAKRAHLYAFWKENVK-RPMVLCGASLGGAAAIDFATNHPEAVEKLVLIDAQGFIEGLGPMGALPRPIAKVGVNVLRTVPLRSAANQLAYYDKATYATDDALRVGRLHTFAPQWCDATLSFM 268
BLAST of EWM25946.1 vs. NCBI_GenBank
Match: gi|145350265|ref|XP_001419533.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144579765|gb|ABO97826.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 196.823 bits (499), Expect = 3.053e-57 Identity = 94/178 (52.81%), Postives = 131/178 (73.60%), Query Frame = 0
Query: 118 SSSHPPVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFS--QLRGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYM 293
S P +LLHGFDSSCLEYRRL P L+ + +AVD++GWGF+ Q G+ D+S EAKR +L+AFW + RPMVL GASLGGAAA+DFA +PEAV+KLVLIDAQ +I+G+GPM + P P+A +G+ +L++ ALR+ A ++Y+D ++T DA+ +GRLHT W +A++ +M
Sbjct: 92 GSDAAPFVLLHGFDSSCLEYRRLFPKLAAKAETWAVDLLGWGFTDAQDGGIGDYSPEAKRAHLYAFWKANVG-RPMVLCGASLGGAAAIDFATNHPEAVEKLVLIDAQGFIEGLGPMGALPRPVAKMGVNILRTTALRNAANQMAYYDKATFATDDALRVGRLHTFAPQWCDATLSFM 268
BLAST of EWM25946.1 vs. NCBI_GenBank
Match: gi|255088689|ref|XP_002506267.1| (predicted protein [Micromonas commoda] >gi|226521538|gb|ACO67525.1| predicted protein [Micromonas commoda]) HSP 1 Score: 191.43 bits (485), Expect = 3.811e-55 Identity = 89/173 (51.45%), Postives = 129/173 (74.57%), Query Frame = 0
Query: 123 PVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQL--RGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYM 293
P +L+HGFDSSCLEYRRL PLL+ +A+AVD++GWGF+ G+ D+S EAKR +L+AFW + RP+ LVGASLGGAA++DFA +PE V++LVL+DAQ +I+G+GPM FP P+A G+ +L+S+ LR+ A ++Y D ++T DAM +G+LHT + W +A++ +M
Sbjct: 96 PFVLIHGFDSSCLEYRRLFPLLTERAEAHAVDLLGWGFTDAGDAGIGDYSPEAKRAHLYAFWKQEIG-RPITLVGASLGGAASIDFATAHPECVERLVLVDAQGFIEGLGPMGMFPRPIALAGVNILKSRPLRNTANQMAYCDRGTFATEDAMRVGQLHTFQPQWADATLSFM 267
BLAST of EWM25946.1 vs. NCBI_GenBank
Match: gi|926781624|ref|XP_013899286.1| (40S ribosomal protein S3-3 [Monoraphidium neglectum] >gi|761969215|gb|KIZ00267.1| 40S ribosomal protein S3-3 [Monoraphidium neglectum]) HSP 1 Score: 187.193 bits (474), Expect = 1.066e-52 Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 0
Query: 113 SPSST--SSSHPPVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQLRGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYM 293
+PS T +S PPV+LLHGFDSS LE RRLHPLL ++A+AVD+ KRE+L +FW + RPMVLVGASLGGA A++FA YPEAV+K+VLIDAQ +IDG+GPM++ P PLAA G+ VL+++ LR A ++YHD ++T DAM +GRLHTH DGW +A++ +M
Sbjct: 26 APSGTYANSDAPPVVLLHGFDSSSLEMRRLHPLLEQEVEAWAVDL------------------KREHLFSFWQEKIG-RPMVLVGASLGGAIALEFALEYPEAVEKIVLIDAQGFIDGIGPMSTMPRPLAAAGVWVLRTEQLRMAANRMAYHDQA-FATEDAMRVGRLHTHLDGWSDANIAFM 188
BLAST of EWM25946.1 vs. NCBI_GenBank
Match: gi|159478949|ref|XP_001697563.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158274442|gb|EDP00225.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 183.726 bits (465), Expect = 1.889e-52 Identity = 100/209 (47.85%), Postives = 133/209 (63.64%), Query Frame = 0
Query: 104 PQGLPPLPSSPS----------STSSSHPP----VLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQLRGVQD-----FSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYM 293
P +P +P P+ S +S+PP V+LLHGFDSSC+E+RRL+P L+ YA+D++GWGF+ + E K +L AF R +VLVGASLGGA A+DFA TYPE V+KLVLIDAQ +IDG+GPMA+ P PL LG+++LQS LR A ++Y D Y+T DAM IGRLHTH GW++A++ +M
Sbjct: 55 PITIPTMPGQPALETAFVGPTASELASYPPDVPAVVLLHGFDSSCMEFRRLYPKLAASAPTYALDLVGWGFTDYSLFKSEPGRVIRPEDKAAHLRAFLQAQCARRRVVLVGASLGGAMALDFAVTYPEVVEKLVLIDAQGFIDGIGPMATAPRPLLWLGVKLLQSVPLRQAANKMAYFDKGRYATEDAMRIGRLHTHLPGWEDANIAWM 263
BLAST of EWM25946.1 vs. NCBI_GenBank
Match: gi|303274637|ref|XP_003056635.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226460987|gb|EEH58280.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 191.815 bits (486), Expect = 2.514e-52 Identity = 110/274 (40.15%), Postives = 156/274 (56.93%), Query Frame = 0
Query: 26 AFSSPCLPCRDPTFPSSPSLPSFSSFCTVFS----PPHAFVRPTASSSIQPYHPRHQRPTLQPCGHGIFPFLPPSRPPATSAPQGLPPLPSSPSSTSSSHPPVLLLHGFDSSCLEYRRLHPLLSPYLDAYAVDMMGWGFSQLR--GVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFAHTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYM 293
A + C+ RDPT S PSF+ F A P A + + Q P G G + + AP+G + P +LLHGFDSSCLEYRRL PLL + +A+D++GWGF+ G+ D+S EAKR +LHAFW + RP+ LVGASLGGAAA+DFA +PE V++LVL+DAQ +I+G+GPM P P+A G+ VL+++ LR+ A ++Y D ++T DAM +G+LHT + W +A++ +M
Sbjct: 397 AVAQECV-ARDPT-----SRPSFAKIVDAFDAMLPEVTALEEPAAVAMAKRCR---QVPVADVAGRGARAIM--TSCVGAPAPEG-----------GEGNAPFVLLHGFDSSCLEYRRLFPLLERRAETWALDLLGWGFTDADDGGIGDYSPEAKRAHLHAFWKQEIG-RPITLVGASLGGAAAIDFATAHPECVERLVLVDAQGFIEGLGPMGLMPRPIALAGVNVLKTRILRNTANQMAYCDKATFATEDAMRVGQLHTFQPQWADATLSFM 647
BLAST of EWM25946.1 vs. NCBI_GenBank
Match: gi|224012032|ref|XP_002294669.1| (hypothetical protein THAPSDRAFT_38512, partial [Thalassiosira pseudonana CCMP1335] >gi|220969689|gb|EED88029.1| hypothetical protein THAPSDRAFT_38512, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 179.874 bits (455), Expect = 6.759e-52 Identity = 88/173 (50.87%), Postives = 119/173 (68.79%), Query Frame = 0
Query: 123 PVLLLHGFDSSCLEYRRLHPLLSPY-LDAYAVDMMGWGFSQLRGVQDFSAEAKREYLHAFWVHVLKERPMVLVGASLGGAAAVDFA-HTYPEAVKKLVLIDAQVYIDGVGPMASFPPPLAALGIRVLQSKALRSYAGTLSYHDAPLYSTRDAMHIGRLHTHRDGWDEASVRYM 293
P+LL+HGFDSS LEYRRL P L+ +D Y VD++GWG++QL V FSA+AK E L FW V +V+ GASLGGAA ++FA + V+ VLIDAQ ++DG+GPM+ P PLA GI+VLQS LR+ A +SYH+ Y+T DA+ +GRLH R+GW++ + +M
Sbjct: 9 PLLLVHGFDSSALEYRRLGPQLAKLGVDVYCVDLLGWGYTQLDDVNSFSAKAKVEALKGFWKTVGSNGEVVVGGASLGGAATIEFAAENFEGFVRGTVLIDAQGFVDGIGPMSFLPAPLARAGIKVLQSVPLRNSANQMSYHNPETYATEDALKVGRLHCLREGWEDGMLSFM 181 The following BLAST results are available for this feature:
BLAST of EWM25946.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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