rna4732, rna4732 (mRNA) Nannochloropsis gaditana

Overview
Namerna4732
Unique Namerna4732
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1199
Alignment locationCM002464.1:205854..206655 -

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Properties
Property NameValue
ProductCRAL-TRIO domain protein
Orig transcript idgnl|cribi|Naga_101687g1.1223.mrna
Orig protein idgnl|cribi|Naga_101687g1.1223
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:205854..206655 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101687g1gene4569Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4732rna4732-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25953.1cds4720Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4732 ID=rna4732|Name=rna4732|organism=Nannochloropsis gaditana|type=mRNA|length=1199bp
TGTACTTCTTTCCTCCCCTTTTGGCGCAAACCATACGAAAGACACGCATA
TTAGCGGATGGGAACAAAATCGGATGCAACCAGCTTTTTATGCGCGTAGC
GCGCGTCTGATCTTCCTGAGCGCTGACTCCGGAGCGTGCGGCCACGCATA
AACGCCAGCTTATATCGCCCTCCTCTTCACTTCCTTCATCCTAGTACCCC
CTAGGTACTGCCTGCCCCTTTTCATCATGTCAGGAAGAGACTCCCAATAC
GACCACCACATAACCATCTTCTCGCCTCAAGGCCGCTTGTACCAAATCGA
ATACGCCTTCAAAGCCGCCAACAGTGAGGGACTAACTTCAGTCGCCGTTC
GAGGGAAGGAATGCGTCGCTGTCGTCACTCAAAAGAAGGTGCCAGACCGT
CTCATTGATCCCTCTTCCGTGTCCAACATCTATCAAATCACGGACAAAGT
GGGCGCAGTGATGACAGGGATGACCACAGATAGCCGCGCCCAGGTGACCC
GTTTGCGGCAGGAGGCGCACGAATTTCGGTTTAAATACGGGTATGACATC
CCTGTGCACGTTCTTGCCAAACGCATCGCCGACATCGCACAGGTTTATAC
GCAGCAAGCGTCCATGCGCGCCTTGGCGACAGTGTGTATGCTGGTGGGTG
TGGACGACGAACGGGGCCCTCAGCTCTACAAAGTAGACCCTGCCGGTCAC
TTCTTCCCCTTCAAGGCCACCGCTGCCGGCGTGAAGCAGGACGAGGCGAC
CAATTGGCTCGAAAAAAAAGTCGGGGATTTGGGGGGTCTCGGGACGGAGG
AGACGGTGGAACTCGCGATCATGGCCCTCCAGTCGGTGCTATCCACGGAC
TTCAAGGGCTCGGAAATCGAAGTGGGCGTGGTGGAAGGTGTAGGTGGGTT
TTTCCACACATTGACAGAAGGAGAAATCGACCATCATTTGACGGCAATTA
CAGAGAAAGATGCATGAGGTAGAATTGATGTAATCAGGGCAGCAGTGGAG
AATGAGAGAGATGCGCGGGAGGAGAGGAGGGGAAGGACGTGGGCCTGAGA
AAAGGGTGCGTAAAGTGGGCGGCACCCAAAAGAAGTCACTTCCTGCCAAA
CTACTGATATTATGTCTCCTTCCACCTGGTGGCTTGATGGCTTCGCTTCG
ATACCGATGACGTCTTCTTATGAAGTCATTTCCTCGTCCCCGTGCATCA
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protein sequence of rna4732

>rna4732-protein ID=rna4732-protein|Name=rna4732|organism=Nannochloropsis gaditana|type=polypeptide|length=164bp
MFNTFWSVIKYSMPERVRNKVTMCNNEAALLEHVTPEQLLTSLGGKEEWD
PTTAEIQPIYMFRNGTLLRDFVQAGDLGTEGAEDGCLGRHAPDLCGSSQG
EATGRAVEEQDTVSECSHARRSFDRLNFIFELEKLRGIPRVRFAPFATLI
YGREITLPTTSPSH
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mRNA from alignment at CM002464.1:205854..206655-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4732 ID=rna4732|Name=rna4732|organism=Nannochloropsis gaditana|type=mRNA|length=802bp|location=Sequence derived from alignment at CM002464.1:205854..206655- (Nannochloropsis gaditana)
ATGTTCAACACCTTCTGGTCGGTGATCAAGTACTCGATGCCCGAACGCGT
CCGGAACAAGGTGACCATGTGCAATAACGAGGCAGCTCTCCTGGAGCACG
TGACGCCGGAACAGCTCCTGACGAGCCTGGGGGGCAAGGAGGAGTGGGAC
CCGACCACGGCTGAGTACTAGGAGGGAGGGAGGGAGGGACGGAGGGAGGG
AGGGACGGAGGAAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAA
GGAAGGAGGGAAGGGGTGTTGGCCACCAGGACCGCCCTCCTTGGATCTCT
GTCACGCGCCTGGGTCTGTAGGTAGAGAATTCAACCAATCTACATGTTTA
GAAACGGAACGCTCTTGAGAGACTTTGTGCAGGCGGGCGACTTGGGGACG
GAGGGTGCGGAGGACGGCTGCCTGGGACGACATGCGCCGGACCTGTGCGG
TTCGTCGCAAGGCGAGGCCGTGGATCGAACCTCCCCATGACCACAAAAGA
AGTAGGACACCAAGATAGCGACTTTAAACTTGAATTTGAAATTTGAATTG
GCAAAGGGAGGACTCGCAGGGCTGGGCAGCGGACTGACGTTTTTCACGGC
TGTGTAAAAACAGACCGGAAGAGCAGTAGAGGAGCAAGACACCGTGTCTG
AGTGTTCACATGCGAGGAGGAGCTTTGATCGATTGAATTTTATATTTGAA
TTGGAAAAACTCAGGGGTATTCCCAGGGTAAGATTTGCCCCCTTCGCAAC
GCTGATATACGGCAGAGAGATCACACTTCCAACCACATCACCAAGCCACT
GA
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Coding sequence (CDS) from alignment at CM002464.1:205854..206655-

>rna4732 ID=rna4732|Name=rna4732|organism=Nannochloropsis gaditana|type=CDS|length=1485bp|location=Sequence derived from alignment at CM002464.1:205854..206655- (Nannochloropsis gaditana)
ACCGGAAGAGCAGTAGAGGAGCAAGACACCGTGTCTGAGTGTTCACATGC
GAGGAGGAGCTTTGATCGATTGAATTTTATATTTGAATTGGAAAAACTCA
GGGGTATTCCCAGGGTAAGATTTGCCCCCTTCGCAACGCTGATATACGGC
AGAGAGATCACACTTCCAACCACATCACCAAGCCACTGAAATTCAACCAA
TCTACATGTTTAGAAACGGAACGCTCTTGAGAGACTTTGTGCAGGCGGGC
GACTTGGGGACGGAGGGTGCGGAGGACGGCTGCCTGGGACGACATGCGCC
GGACCTGTGCGGTTCGTCGCAAGGCGAGGCCATGTTCAACACCTTCTGGT
CGGTGATCAAGTACTCGATGCCCGAACGCGTCCGGAACAAGGTGACCATG
TGCAATAACGAGGCAGCTCTCCTGGAGCACGTGACGCCGGAACAGCTCCT
GACGAGCCTGGGGGGCAAGGAGGAGTGGGACCCGACCACGGCTGAACCGG
AAGAGCAGTAGAGGAGCAAGACACCGTGTCTGAGTGTTCACATGCGAGGA
GGAGCTTTGATCGATTGAATTTTATATTTGAATTGGAAAAACTCAGGGGT
ATTCCCAGGGTAAGATTTGCCCCCTTCGCAACGCTGATATACGGCAGAGA
GATCACACTTCCAACCACATCACCAAGCCACTGAAATTCAACCAATCTAC
ATGTTTAGAAACGGAACGCTCTTGAGAGACTTTGTGCAGGCGGGCGACTT
GGGGACGGAGGGTGCGGAGGACGGCTGCCTGGGACGACATGCGCCGGACC
TGTGCGGTTCGTCGCAAGGCGAGGCCATGTTCAACACCTTCTGGTCGGTG
ATCAAGTACTCGATGCCCGAACGCGTCCGGAACAAGGTGACCATGTGCAA
TAACGAGGCAGCTCTCCTGGAGCACGTGACGCCGGAACAGCTCCTGACGA
GCCTGGGGGGCAAGGAGGAGTGGGACCCGACCACGGCTGAACCGGAAGAG
CAGTAGAGGAGCAAGACACCGTGTCTGAGTGTTCACATGCGAGGAGGAGC
TTTGATCGATTGAATTTTATATTTGAATTGGAAAAACTCAGGGGTATTCC
CAGGGTAAGATTTGCCCCCTTCGCAACGCTGATATACGGCAGAGAGATCA
CACTTCCAACCACATCACCAAGCCACTGAAATTCAACCAATCTACATGTT
TAGAAACGGAACGCTCTTGAGAGACTTTGTGCAGGCGGGCGACTTGGGGA
CGGAGGGTGCGGAGGACGGCTGCCTGGGACGACATGCGCCGGACCTGTGC
GGTTCGTCGCAAGGCGAGGCCATGTTCAACACCTTCTGGTCGGTGATCAA
GTACTCGATGCCCGAACGCGTCCGGAACAAGGTGACCATGTGCAATAACG
AGGCAGCTCTCCTGGAGCACGTGACGCCGGAACAGCTCCTGACGAGCCTG
GGGGGCAAGGAGGAGTGGGACCCGACCACGGCTGA
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Synonyms
Publications