EWM25953.1, cds4720 (CDS) Nannochloropsis gaditana

Overview
NameEWM25953.1
Unique Namecds4720
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:206492..206655 -
Alignment locationCM002464.1:206187..206328 -
Alignment locationCM002464.1:205854..206042 -

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Properties
Property NameValue
Protein idEWM25953.1
ProductCRAL-TRIO domain protein
Orig transcript idgnl|cribi|Naga_101687g1.1223.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:206492..206655 -
CM002464.1supercontigCM002464.1:206187..206328 -
CM002464.1supercontigCM002464.1:205854..206042 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
Homology
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BLAST of EWM25953.1 vs. NCBI_GenBank
Match: gi|585107834|gb|EWM25953.1| (CRAL-TRIO domain protein [Nannochloropsis gaditana])

HSP 1 Score: 343.584 bits (880), Expect = 9.175e-120
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 
Query:    1 MFNTFWSVIKYSMPERVRNKVTMCNNEAALLEHVTPEQLLTSLGGKEEWDPTTAEIQPIYMFRNGTLLRDFVQAGDLGTEGAEDGCLGRHAPDLCGSSQGEATGRAVEEQDTVSECSHARRSFDRLNFIFELEKLRGIPRVRFAPFATLIYGREITLPTTSPSH 164
            MFNTFWSVIKYSMPERVRNKVTMCNNEAALLEHVTPEQLLTSLGGKEEWDPTTAEIQPIYMFRNGTLLRDFVQAGDLGTEGAEDGCLGRHAPDLCGSSQGEATGRAVEEQDTVSECSHARRSFDRLNFIFELEKLRGIPRVRFAPFATLIYGREITLPTTSPSH
Sbjct:    1 MFNTFWSVIKYSMPERVRNKVTMCNNEAALLEHVTPEQLLTSLGGKEEWDPTTAEIQPIYMFRNGTLLRDFVQAGDLGTEGAEDGCLGRHAPDLCGSSQGEATGRAVEEQDTVSECSHARRSFDRLNFIFELEKLRGIPRVRFAPFATLIYGREITLPTTSPSH 164
The following BLAST results are available for this feature:
BLAST of EWM25953.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107834|gb|EWM25953.1|9.175e-120100.00CRAL-TRIO domain protein [Nannochloropsis gaditana... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4732rna4732Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications