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Properties
| Property Name | Value |
|---|
| Product | gdp-mannose -dehydratase |
| Orig transcript id | gnl|cribi|Naga_100400g9.8596.mrna |
| Orig protein id | gnl|cribi|Naga_100400g9.8596 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:185873..186380 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4724 ID=rna4724|Name=rna4724|organism=Nannochloropsis gaditana|type=mRNA|length=834bp
ATGCATATGCTGCCCCACCTATTTTCCTCGAGTCATATAAGGTTACAACC
AGCCCTTTCGCCACTCTCTTTCAGCATGGAACACGAGACTGGTGGGTTTG
ACACCGCCAATATGAGCATGCCGGAGGCTGTGTTCTCCCCGGACGCCCAG
GTGGAGTACAACGGAGCAGGGGAACGCCGAAAGGTCGCTTTGCTCACAGG
GGTCACGGGCCAAGATGGGTCCTACCTGTGCGAATTTCTCTTGGAAAAAG
GATACATTGTGCATGGGATCATCCGACGTTCCTCCACTTTCAACACGCAC
CGGATCGAGCACCTCTACAAGGATAGACATGCCGCGGGCGTGCGCTTCTT
CCTGCATTACGGAGATCTCACGGACTCGACGAATCTGACTCAGCTCATCT
CCCAGATCCGCCCCGACGAAATTTACAACCTAGGAGCCATGTCCCACGTG
AAGGTGTCCTTCCAGATGTCGGAGTACACCGCTGACGTGGACGGGATCGG
TGCCCTTCGCCTCTTGAACGCCGTCCGGGCGTGTGGCTTGGAGAAAACAA
CCCGGCTGTACCAGGCTTCCACCTCTGAGCTGTACGGCAAAGTGCAAGAA
GTGCCTCAGTCTGAAACCACGCCTTTTTACCCACGATCTCCTTATGGTGT
TGCCAAACAGTACGCCTACTGGATCCTGGTCAACTACCGCGAAGCCTACG
ACATGTTCCTCGTCAATGGAATTCTTTTCAACCACGAATCGCCCCGGCGA
GGCCCTACTTTCGTCACTCGCAAAATCACGCGCGCTGTCGCCCGTATCCA
GAAGGGACTGCAGAAGACCCTCTACCTGGTCTAG back to topprotein sequence of rna4724 >rna4724-protein ID=rna4724-protein|Name=rna4724|organism=Nannochloropsis gaditana|type=polypeptide|length=83bp
MEVEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAK
KHIGWEPEVSFDDLVKEMVEADIALVEKGDLTS back to topmRNA from alignment at CM002464.1:185873..186380+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4724 ID=rna4724|Name=rna4724|organism=Nannochloropsis gaditana|type=mRNA|length=508bp|location=Sequence derived from alignment at CM002464.1:185873..186380+ (Nannochloropsis gaditana)
ATGGAAGTggaatggaaaggggaaaaaggttCTGTTAACGAAGTAGGCTA
CAACAAGGCCGATCCCGAGGTACGACTTctcgctcgctccctccctccct
ccctcccacctcatTATTCCCTCCTTAAACCCTTCTCactgccctttcct
ttcctttatTGTTCCCTCTTGCCGCCCTTCGTGTCGGCAGCATGTCCTTG
TGAAGATTGATCCCCAGTACTTCCGCCCCACCGAagtcgagctcctcctc
gggaACCCGGCTAAAGCCAAGAAGCACATAGGGTAAGTCCATTCGCCCgc
gtttcttttcttcccgccttctcgttTCCCTTGTtgtccccttcttcttt
gtcatctgtcctcctctgctgCATTCGTAACCCTCTTGGCCGATTCCGTA
CCGCTCTGTCTGTCTAGGTGGGAGCCAGAAGTCTCGTTCGACGACCTGGT
CAAGGAGATGGTTGAGGCGGATATTGCCCTGGTAGAGAAGGGAGACCTCA
CCTCCTAg back to topCoding sequence (CDS) from alignment at CM002464.1:185873..186380+ >rna4724 ID=rna4724|Name=rna4724|organism=Nannochloropsis gaditana|type=CDS|length=756bp|location=Sequence derived from alignment at CM002464.1:185873..186380+ (Nannochloropsis gaditana)
ATGGAAGTggaatggaaaggggaaaaaggttCTGTTAACGAAGTAGGCTA
CAACAAGGCCGATCCCGAGCATGTCCTTGTGAAGATTGATCCCCAGTACT
TCCGCCCCACCGAagtcgagctcctcctcgggaACCCGGCTAAAGCCAAG
AAGCACATAGGGTGGGAGCCAGAAGTCTCGTTCGACGACCTGGTCAAGGA
GATGGTTGAGGCGGATATTGCCCTGGTAGAGAAGGGAGACCTCACCTCCT
AgATGGAAGTggaatggaaaggggaaaaaggttCTGTTAACGAAGTAGGC
TACAACAAGGCCGATCCCGAGCATGTCCTTGTGAAGATTGATCCCCAGTA
CTTCCGCCCCACCGAagtcgagctcctcctcgggaACCCGGCTAAAGCCA
AGAAGCACATAGGGTGGGAGCCAGAAGTCTCGTTCGACGACCTGGTCAAG
GAGATGGTTGAGGCGGATATTGCCCTGGTAGAGAAGGGAGACCTCACCTC
CTAgATGGAAGTggaatggaaaggggaaaaaggttCTGTTAACGAAGTAG
GCTACAACAAGGCCGATCCCGAGCATGTCCTTGTGAAGATTGATCCCCAG
TACTTCCGCCCCACCGAagtcgagctcctcctcgggaACCCGGCTAAAGC
CAAGAAGCACATAGGGTGGGAGCCAGAAGTCTCGTTCGACGACCTGGTCA
AGGAGATGGTTGAGGCGGATATTGCCCTGGTAGAGAAGGGAGACCTCACC
TCCTAg back to top
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