EWM25959.1, cds4712 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25959.1 vs. NCBI_GenBank
Match: gi|585107843|gb|EWM25959.1| (gdp-mannose -dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 167.933 bits (424), Expect = 8.781e-53 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 Query: 1 MEVEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALVEKGDLTS 83 MEVEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALVEKGDLTS Sbjct: 1 MEVEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALVEKGDLTS 83
BLAST of EWM25959.1 vs. NCBI_GenBank
Match: gi|1210527589|dbj|GAX13714.1| (GDPmannose 4,6-dehydratase [Fistulifera solaris]) HSP 1 Score: 114.39 bits (285), Expect = 1.056e-28 Identity = 50/74 (67.57%), Postives = 63/74 (85.14%), Query Frame = 0 Query: 3 VEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALV 76 V+W+GEKG+V+EVG + ADP VLV+IDP+YFRPTEV+LLLGNPAKAK+ +GW FD LVKEMVEAD+A++ Sbjct: 277 VQWQGEKGTVDEVGVDAADPSRVLVRIDPRYFRPTEVDLLLGNPAKAKERLGWSSSTPFDALVKEMVEADLAIL 350
BLAST of EWM25959.1 vs. NCBI_GenBank
Match: gi|950884241|ref|XP_014525236.1| (GDP-mannose dehydratase [Blastocystis sp. subtype 4] >gi|902859847|gb|KNB41793.1| GDP-mannose dehydratase [Blastocystis sp. subtype 4]) HSP 1 Score: 114.39 bits (285), Expect = 1.540e-28 Identity = 48/77 (62.34%), Postives = 68/77 (88.31%), Query Frame = 0 Query: 1 MEVEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALVE 77 +EVEW+GEKGSVNE+G +KA+PEHV+V+IDP+YFRP+EV+LL+G+ +KA+K +GWE +VSF +LV+EMV+ D+ E Sbjct: 283 IEVEWRGEKGSVNEIGVDKANPEHVIVRIDPKYFRPSEVDLLIGDCSKAQKELGWEKKVSFQELVEEMVDCDLRSAE 359
BLAST of EWM25959.1 vs. NCBI_GenBank
Match: gi|1210530427|dbj|GAX11011.1| (GDPmannose 4,6-dehydratase [Fistulifera solaris]) HSP 1 Score: 113.62 bits (283), Expect = 2.203e-28 Identity = 49/74 (66.22%), Postives = 63/74 (85.14%), Query Frame = 0 Query: 3 VEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALV 76 V+W+GEKG+V+EVG + ADP +LV+IDP+YFRPTEV+LLLGNPAKAK+ +GW FD LVKEMVEAD+A++ Sbjct: 277 VQWQGEKGTVDEVGVDAADPSRILVRIDPRYFRPTEVDLLLGNPAKAKEKLGWSSSTPFDALVKEMVEADLAIL 350
BLAST of EWM25959.1 vs. NCBI_GenBank
Match: gi|551599846|ref|XP_005781713.1| (hypothetical protein EMIHUDRAFT_434640 [Emiliania huxleyi CCMP1516] >gi|485634509|gb|EOD29284.1| hypothetical protein EMIHUDRAFT_434640 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 108.612 bits (270), Expect = 1.233e-26 Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 0 Query: 1 MEVEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALVEKGDLTS 83 + +EW+GE V+E+G + AD VLV+IDP+YFRPTEVELL+G+PAKAK+ +GW P++ +L KEMV +DIALVEKGDLTS Sbjct: 276 ITIEWQGE--GVDEIGVDAADKSRVLVRIDPKYFRPTEVELLIGDPAKAKEKLGWVPKIPMQELCKEMVASDIALVEKGDLTS 356
BLAST of EWM25959.1 vs. NCBI_GenBank
Match: gi|551577961|ref|XP_005774582.1| (hypothetical protein EMIHUDRAFT_310372 [Emiliania huxleyi CCMP1516] >gi|485626438|gb|EOD22153.1| hypothetical protein EMIHUDRAFT_310372 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 108.612 bits (270), Expect = 1.464e-26 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0 Query: 1 MEVEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALVEKGDLTS 83 + +EW+GE V+E+G + AD VLV+IDP+YFRPTEVELL+G+PAKAK+ +GW P++ +L KEMV DIALVEKGDLTS Sbjct: 272 ITIEWQGE--GVDEIGVDAADKSRVLVRIDPKYFRPTEVELLIGDPAKAKEKLGWVPKIPMQELCKEMVACDIALVEKGDLTS 352
BLAST of EWM25959.1 vs. NCBI_GenBank
Match: gi|397639781|gb|EJK73759.1| (hypothetical protein THAOC_04601 [Thalassiosira oceanica]) HSP 1 Score: 103.605 bits (257), Expect = 1.739e-25 Identity = 46/75 (61.33%), Postives = 64/75 (85.33%), Query Frame = 0 Query: 3 VEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALVE 77 ++WKGE G+V+E+G + D VLVKIDP+YFRPTEVELLLG+P+KAKK +GWE E+ F+ LVK+M++AD+A+V+ Sbjct: 162 IKWKGETGTVDEIGVDADDESRVLVKIDPRYFRPTEVELLLGDPSKAKKTLGWEAELGFEGLVKDMMKADLAMVK 236
BLAST of EWM25959.1 vs. NCBI_GenBank
Match: gi|855302723|ref|XP_012894519.1| (uncharacterized protein [Blastocystis hominis] >gi|300175160|emb|CBK20471.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 105.531 bits (262), Expect = 3.017e-25 Identity = 47/77 (61.04%), Postives = 64/77 (83.12%), Query Frame = 0 Query: 1 MEVEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALVE 77 +EVEW+GEK + NE+G +KA+PEHV+V+IDP+YFRPTEV+LL+G+ KAK +GW+ EVSFD LV+EMV+ D+ E Sbjct: 281 IEVEWRGEKDTPNEIGVDKANPEHVIVRIDPKYFRPTEVDLLIGDCTKAKTVLGWKKEVSFDQLVEEMVDCDMKSAE 357
BLAST of EWM25959.1 vs. NCBI_GenBank
Match: gi|224001660|ref|XP_002290502.1| (gdp-d-mannose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335] >gi|220973924|gb|EED92254.1| gdp-d-mannose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 103.99 bits (258), Expect = 8.372e-25 Identity = 45/74 (60.81%), Postives = 60/74 (81.08%), Query Frame = 0 Query: 3 VEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALV 76 + WKGE G+VNE G + AD VLV+IDP+YFRPTEV+LLLG+P+KAKK +GWE + F+ LVK+M+ AD+A+V Sbjct: 276 IAWKGETGTVNEYGVDAADESRVLVRIDPRYFRPTEVDLLLGDPSKAKKTLGWEATLGFEGLVKDMMTADLAMV 349
BLAST of EWM25959.1 vs. NCBI_GenBank
Match: gi|551578263|ref|XP_005774733.1| (hypothetical protein EMIHUDRAFT_207491 [Emiliania huxleyi CCMP1516] >gi|485626589|gb|EOD22304.1| hypothetical protein EMIHUDRAFT_207491 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 97.0561 bits (240), Expect = 1.689e-24 Identity = 47/83 (56.63%), Postives = 61/83 (73.49%), Query Frame = 0 Query: 1 MEVEWKGEKGSVNEVGYNKADPEHVLVKIDPQYFRPTEVELLLGNPAKAKKHIGWEPEVSFDDLVKEMVEADIALVEKGDLTS 83 + +EW+GE+ AD VLV+IDP+Y RPTEVELL+G+PAKAK+ +GW P++ +L KEMV +DIALVEKGDLTS Sbjct: 26 ITIEWQGER----------ADKSRVLVRIDPKYVRPTEVELLIGDPAKAKEKLGWVPKIPMQELCKEMVASDIALVEKGDLTS 98 The following BLAST results are available for this feature:
BLAST of EWM25959.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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