rna4719, rna4719 (mRNA) Nannochloropsis gaditana

Overview
Namerna4719
Unique Namerna4719
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1353
Alignment locationCM002464.1:170038..170885 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100562g3.5789.mrna
Orig protein idgnl|cribi|Naga_100562g3.5789
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:170038..170885 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100562g3gene4556Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4719rna4719-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25965.1cds4707Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4719 ID=rna4719|Name=rna4719|organism=Nannochloropsis gaditana|type=mRNA|length=1353bp
AAGCAAGGAGGAATGTGAATGCTTAAGTACGAAGGAATGTTATGCTCGGT
GTTGTATATTCCCGTCCATGTCCTCGGCTTGTCTTGGAAATGCCAAAAGC
AGAGAATCCGGGCGACCAACCGGAAGGCGAGAGGCAGGTCCGATCACGAG
ACGAGCCTCTTACGACTGCCTGTGGATTGGGCCGTTTTTCATGTACATGG
AATCGAAAACCGGTGCCCGATGTAGACCAAGCTCTGCATTCAATAGGACC
TGTAGAAGGCCGTAAATCGACGGCACAGGAAACATATGAAAAGGATGGTG
GCACCAGCCCGAGGGATGGACAAATTCCGCTGCTAGTGGAGTTCAGAATT
TGGCTGCGACCGCTTTGTTCTCTTTTCCACGTCTCCATTACCCTCTATAA
TTGATGCACGCAAGCCACTTAAATTTGACTCTCCCACCGCAGGGCATGGA
GCTGCCTCCCTTGGAGGTGGTGATCAAACTTATCCTTCTTCAACTCTGTG
GGACTTTGCTCCTCTTCCTCCTGATTCGACAGTGTTTTGTTTGGAAAGGC
CGCAAATATTTCCCTCCCCTTACTAGTGGGAGCGTTCTTTTGACTGGGAC
GAGCAGCGGGATCGGTCGCACTGCTGCCGTGTACTTGGCTCAACGTGGTT
TTACGGTTCTGGCGGGCGTTCGGAAAGAAAGCGATGCACAAGCCTTGAGA
GATTTGGGCGTCTCTGGGATCCATCCAGTGATTATTGACGTCGCGAAAGC
AAGCAGCGTGGAAGCCTGTCGTCAACACGTGCTCTCCCTTTTGGACGCAA
AGACCGTGCCTCCCTTGGTGGGGGTAGTGAACAACGCAGGTCTTCTCCAA
GATGCCACCGTAGAATTCCACGACATGGCTCAGATGCGTCACATGTTCGA
GGTGAACTACTTTGGGTTAATCTCCGTCTCCTCCGCCTTTCTTCCCCTCC
TCCGCCGTCCGCCGGGGTCCTCCTCTCCCCACCCGAACCACCAGGGCCGT
CTAATCAACATTGGGTCGGTGAGCGGGAAGGTATCCTTCCCGAGGTACGG
GGCCTATGCGGCCAGCAAGCACGCGGTGGAGGCCGTCACCGACTCCCTCC
GCGCGGAGTTGGACCCGGCTGGCGTGAGTGTCTCGCTTGTCCAGCCAGGA
TTTTGCCGGACCGAGCTCTTTATCCGGGGGGTGGTGCGCGAGAAGAAAGA
GGCGCACGCGGCGGGGCAACAGATTGTGAGCCGGGGGGGTGGGGGGGCGT
GGAGGGGAGAAAGGGGAAGGGAGGGAGGGACGGTTGAAAGGAGATGGTGC
GGAGGGATGCTGGAAGTAGGAAGGTTTTGGGAGAGAGGGGGGGGGGGGGG
GGG
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protein sequence of rna4719

>rna4719-protein ID=rna4719-protein|Name=rna4719|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
MGYFSKICLVAMATTLLSANFLATVQAFVLPSSRVNAASSLSTKMMGAST
AEAGEKTTMTATDVKNGLMAKIMEDPNLKLPDQFQQALTDILDGMTEVAE
ETGEGGREG
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mRNA from alignment at CM002464.1:170038..170885-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4719 ID=rna4719|Name=rna4719|organism=Nannochloropsis gaditana|type=mRNA|length=848bp|location=Sequence derived from alignment at CM002464.1:170038..170885- (Nannochloropsis gaditana)
CGATCTCCCCTTACCCCACAAAACATGTATATGCACAGCGAGGGAAGAAA
AAAGGGAAAAAGGAAGGTGCGAAGCAAGAGATGGGTTATTTTTCGAAGAT
CTGCCTTGTGGCCATGGCTACAACACTTCTGTCTGCCAACTTTCTCGCGA
CTGTGCAAGCCTTCGTGCTTCCCAGCAGGTACGATACATAAGAGGGAGCT
CGAGGCATTGTTCCACTTGAGTGCATGGAATAAAAATTTACGTGTTGCAT
CCACCACAAATTTGGTATCTGCTATAACAGCCGCGTCAATGCGGCGTCTT
CCCTCTCGACCAAGGTAAGTCACGGATAATGCTGGCTTGGCCTCCAAGCC
CCGCTTTGTTCGTCACCCCCTTCCCGGTTCGTTTCCCACGGGGTCAGATG
ATGGGCGCGAGCACAGCCGAGGCCGGGGAGAAGACGACTATGACGGCAAC
AGACGTCAAGAACGGGGTAAGAGGTGGGAAAGATGGAGTCTTGGCCTCCC
TAAGTGGGCCAAGAGGCGGATTTTAGAGCACAGAAGGACGCTTTTGATCC
TCGCAGTCCCAGTCCTGTCTTACCTTTCTGGATACGCCATCCCATTCAGC
TCATGGCGAAGATCATGGAGGACCCCAATCTGAAGCTACCGGATCAGTTC
CAGCAAGGTGCGTAGGGGGGAAATGTGCGCAGGAAAGGGGGAAGAAAGGG
AAATATGAGGAAAGAGAGTGGGAGAGAGAAGAATGGGCGATGCATATATC
TGAGCTTTTTTACCCCCTACATGGTGTAGCACTGACGGATATCTTGGATG
GCATGACCGAGGTGGCGGAAGAGACAGGTGAGGGAGGAAGGGAGGGAG
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Coding sequence (CDS) from alignment at CM002464.1:170038..170885-

>rna4719 ID=rna4719|Name=rna4719|organism=Nannochloropsis gaditana|type=CDS|length=1640bp|location=Sequence derived from alignment at CM002464.1:170038..170885- (Nannochloropsis gaditana)
CACTGACGGATATCTTGGATGGCATGACCGAGGTGGCGGAAGAGACAGGT
GAGGGAGGAAGGGAGGGAGCTCATGGCGAAGATCATGGAGGACCCCAATC
TGAAGCTACCGGATCAGTTCCAGCAAGATGATGGGCGCGAGCACAGCCGA
GGCCGGGGAGAAGACGACTATGACGGCAACAGACGTCAAGAACGGGCCGC
GTCAATGCGGCGTCTTCCCTCTCGACCAAGATGGGTTATTTTTCGAAGAT
CTGCCTTGTGGCCATGGCTACAACACTTCTGTCTGCCAACTTTCTCGCGA
CTGTGCAAGCCTTCGTGCTTCCCAGCAGCACTGACGGATATCTTGGATGG
CATGACCGAGGTGGCGGAAGAGACAGGTGAGGGAGGAAGGGAGGGAGCTC
ATGGCGAAGATCATGGAGGACCCCAATCTGAAGCTACCGGATCAGTTCCA
GCAAGATGATGGGCGCGAGCACAGCCGAGGCCGGGGAGAAGACGACTATG
ACGGCAACAGACGTCAAGAACGGGCCGCGTCAATGCGGCGTCTTCCCTCT
CGACCAAGATGGGTTATTTTTCGAAGATCTGCCTTGTGGCCATGGCTACA
ACACTTCTGTCTGCCAACTTTCTCGCGACTGTGCAAGCCTTCGTGCTTCC
CAGCAGCACTGACGGATATCTTGGATGGCATGACCGAGGTGGCGGAAGAG
ACAGGTGAGGGAGGAAGGGAGGGAGCTCATGGCGAAGATCATGGAGGACC
CCAATCTGAAGCTACCGGATCAGTTCCAGCAAGATGATGGGCGCGAGCAC
AGCCGAGGCCGGGGAGAAGACGACTATGACGGCAACAGACGTCAAGAACG
GGCCGCGTCAATGCGGCGTCTTCCCTCTCGACCAAGATGGGTTATTTTTC
GAAGATCTGCCTTGTGGCCATGGCTACAACACTTCTGTCTGCCAACTTTC
TCGCGACTGTGCAAGCCTTCGTGCTTCCCAGCAGCACTGACGGATATCTT
GGATGGCATGACCGAGGTGGCGGAAGAGACAGGTGAGGGAGGAAGGGAGG
GAGCTCATGGCGAAGATCATGGAGGACCCCAATCTGAAGCTACCGGATCA
GTTCCAGCAAGATGATGGGCGCGAGCACAGCCGAGGCCGGGGAGAAGACG
ACTATGACGGCAACAGACGTCAAGAACGGGCCGCGTCAATGCGGCGTCTT
CCCTCTCGACCAAGATGGGTTATTTTTCGAAGATCTGCCTTGTGGCCATG
GCTACAACACTTCTGTCTGCCAACTTTCTCGCGACTGTGCAAGCCTTCGT
GCTTCCCAGCAGCACTGACGGATATCTTGGATGGCATGACCGAGGTGGCG
GAAGAGACAGGTGAGGGAGGAAGGGAGGGAGCTCATGGCGAAGATCATGG
AGGACCCCAATCTGAAGCTACCGGATCAGTTCCAGCAAGATGATGGGCGC
GAGCACAGCCGAGGCCGGGGAGAAGACGACTATGACGGCAACAGACGTCA
AGAACGGGCCGCGTCAATGCGGCGTCTTCCCTCTCGACCAAGATGGGTTA
TTTTTCGAAGATCTGCCTTGTGGCCATGGCTACAACACTTCTGTCTGCCA
ACTTTCTCGCGACTGTGCAAGCCTTCGTGCTTCCCAGCAG
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Synonyms
Publications