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Properties
| Property Name | Value |
|---|
| Product | dna helicase |
| Orig transcript id | gnl|cribi|Naga_101513g1.2276.mrna |
| Orig protein id | gnl|cribi|Naga_101513g1.2276 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:158514..160869 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4716 ID=rna4716|Name=rna4716|organism=Nannochloropsis gaditana|type=mRNA|length=816bp
ATGACAAGCGGCTGTACACCTGAAAAACGAGGATCTAGTGGCGCTCGTGA
CCAAGAGTATCGTGATCTCCCTCCCGGGTCTCTTTGCTGCCCTGCACGGT
TTGAAGGCAAGTTCACATTGCACCTACAACAAAACCGAGCCACGACGATG
ACAATCCTCTATGCCCTGATTGCCCGTGGAAAGGATGTCCTATGCGAGTA
TACGGCCGTCTCGGGAAATTTCCCCACGGTAACCCGCCTTCTTCTAGGGA
AGATCCCGCGGGGGGAGGACGGAAAACGCAGCTACGTCTATGATGCGCAT
GTCTTCCATTACATCGTCGCAGACCGACTAACCTATCTGTGTATGACCGA
TGACCCGCAGCAAAAGCGTTTTCGGGCTCCGTTTGCGTACTTGAATGACA
TCAAGGACCGTTTCCTGACCCGATACGGGCGTGAAAGCGCGCACACGGCC
ATTGCCTTTGCCATGAACGAAGAATTTTCCGGGATATTAAAGAGGCAAAT
GGATTACTTCAACAGTCCCGATGCGGCGGCCTCGAGCGCCCTGCAAGCGA
AACTGGACGACGTGCGGAACGTCATGATCCAAAATGTGGACCTGGTCTTG
GAGAGGGGCGAAAAATTAGAGCTTTTGGTGGACAAAACCGCCGACTTGCA
GCACAGTGCCTTCAAATTCGAACGATCCTCCCGGCAACTCCGGCATGAGA
TGCTGTGGCGAAGGATCCGCTGTTACTTGCTCATAACTGGATTGATTGTC
GCACTGATCTTATTGATCTCAGCCTCCGCGTGTGGCTTTGATTTTCACGG
GTGTGGAAAGAGATAG back to topprotein sequence of rna4716 >rna4716-protein ID=rna4716-protein|Name=rna4716|organism=Nannochloropsis gaditana|type=polypeptide|length=194bp
MQDASQCNHRIFGHRSFRLGQEKVVEAALSLRDVFVLMPTGGGKSLCYQL
PACLTPGITVVFSPLLSLIQDQVEGLRENGVDAAQLTSHQDYETEGREIM
DRLYHLPAHGSLKLLYITPEKFARSDAMVKCLQRLKDRGLLARFVIDEAH
CISQWGHDFRPDYLMLRSIRDKFPSIPIMALTATANQRLLEDAT back to topmRNA from alignment at CM002464.1:158514..160869+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4716 ID=rna4716|Name=rna4716|organism=Nannochloropsis gaditana|type=mRNA|length=2356bp|location=Sequence derived from alignment at CM002464.1:158514..160869+ (Nannochloropsis gaditana)
gaggaaggggatccGTGTTCGAAATGTGGGAAGCCATTGGAGGCTCGTGT
GGCGCGGACAGACACCAATGCAGGTACCACCTgggtccttctccctccct
ccctccctccctccccctcttgccATCTTCTTTCCAACCTCAATCCCCTC
CGACGACTTGCGTTGTATGCGCTACTGAGGCACGCATGTCACCcattcac
ctccctccctccgtctctccctccctctgtccctccctcctcccaacaGG
CCGAAAGTTCTGGAAGTGCTTCGACTGCGATGCCGACTTCCGctgggacg
acgaggaaggagggggaagggggggagattACGGGGAGAgagcctccttc
cctatccATCACGAGCTTCCGGTCCACAATATTAGCATGCAAGACGCCTC
CCAggtcttttccctccctcctcccccacctccctcccctcgctccccgc
GTCCATGATGAGGCCCTTgaccctttctccctccctccctccctccctcc
ctcttcccctcccttccccagtGCAACCACCGCATTTTTGGACACCGCTC
CTTCCGCctggggcaggagaaggtggtggaggcagcgCTCTCCCTGCGCG
acgtcttcgtcctcatgcccacagggggaggaaagagcctCTGCTACCAG
TTGCCTGCCTGCTTGACGCCGGGTAtgacgcgagggagggagggagagag
gggggaaggatagGGGGGGTTAAGCGCGGACTTCGGGCGCattgggaagg
aggatgcaggaggaaagcaggggagaggagtgGGAAAGCGAGAGGATACA
GGATCACGTTGAGGTCTCCAGGAAAAcgaaagggcggggagggaggaaag
gaagaagggcggtCGACACACTGCAAGTCCCCATCTTGACGTCTCCTGCA
CTGGACCTTCCGGTGCCTcgccgtccttctcctccctcccttcctccttt
cctccctcaggcatCACGGTTGtcttctcgcccctcctctcgctcATTCA
AGACCAAGTGGAAGGGCTCCGGGAAAACGGCGTGGACGCTGCACAGCTGA
CGTCCCACCAGGtacctctcccttgccctccctccctttctccttcctcc
cgcttcagcctccctcccccggggcccTTGTCGCCGTTACCTGTCACCAT
GACCACCTCCTAACTCCCTCGATGAGCGCCCCACCCCCCGCCCGGGGCAT
CTCCGCAGCAGATCCCTCTAAATACACGCCTATTAAAACCTGCATAGACC
GGGTTCAAAACGTCTGTTGCCTAaatcccttcccccgccccccacaGGAT
TATGAAACTGAGGGCAGGGAAATCATGGATCGTCTCTAccatctccccgc
ccacggAAGTCTGAAGCTTTTGTACATCACCCCGGAGAAATTCGCACGGT
GAGTCCCCTTTCCAGTCGCCGGCTGGGTTTGCGAACGTGCTCGCCGTCCA
GCCTTTGCACCCCCACAGTCTCCACTTTGGGAAGCAACGCACATCGaacc
atgccctccctccctccctccctccctctctccctccctcccttcgttcc
TTGCTACCTTCCTTCCTTAGGTCGGACGCCATGGTCAAATGCCTGCAGCG
GCTGAAGGACCGCGGACTCCTCGCCCGCTTTGTCATCGACGAGGCTCACT
GCATCTCACAGGTAAggcctctccttgcctctcttcctccctccttccct
tcttccctccctcctcttctccgccaccatctttccctcccatgcaCGTA
ATGGCGACTTTCACCCTGTGTTCTTTtgaccctccttcctttcgccACCT
CTCCtgtctcccgccctcccgccctccctccctccctccctccctccctc
cctccctcccttccacccgtccttcctccctttcttcagTGGGGCCATGA
CTTCCGCCCGGACTATCTCATGCTCCGCTCCATCCGCGATAAATTTCCCA
GCATTCCTATCATGGTAAGGGACTTCTCATAGATGTCGTCCTTCCCGCAC
TCGTTCTGCGTCTTCAAAATGCATTGTATTCTttttcacctccaccttAC
GTTTTTCTTTCAACTTCTTAAactaccctcccttccctgtttcctgtctc
cccccccccccacctccaggcTTTGACTGCTACAGCCAATCAACGCCTGC
TCGAGGACGCGGTGAAGCTCCTCAAGATGCAGTCTCCTTACATCCATCAA
CAGTCCTTCAACCGCCCCAACCTTACATACGATATTCGGCCAAAGAGCAA
GGCAAGTCCTGCTttcctcgttcccctcctccctttctttctccattcGT
GCATTCTTCCTTTATTTTTCTCTTgtcatcctttccttttcaccATCAAG
ACTTGA back to topCoding sequence (CDS) from alignment at CM002464.1:158514..160869+ >rna4716 ID=rna4716|Name=rna4716|organism=Nannochloropsis gaditana|type=CDS|length=4680bp|location=Sequence derived from alignment at CM002464.1:158514..160869+ (Nannochloropsis gaditana)
ATGCAAGACGCCTCCCAgtGCAACCACCGCATTTTTGGACACCGCTCCTT
CCGCctggggcaggagaaggtggtggaggcagcgCTCTCCCTGCGCGacg
tcttcgtcctcatgcccacagggggaggaaagagcctCTGCTACCAGTTG
CCTGCCTGCTTGACGCCGGgcatCACGGTTGtcttctcgcccctcctctc
gctcATTCAAGACCAAGTGGAAGGGCTCCGGGAAAACGGCGTGGACGCTG
CACAGCTGACGTCCCACCAGGATTATGAAACTGAGGGCAGGGAAATCATG
GATCGTCTCTAccatctccccgcccacggAAGTCTGAAGCTTTTGTACAT
CACCCCGGAGAAATTCGCACGGTCGGACGCCATGGTCAAATGCCTGCAGC
GGCTGAAGGACCGCGGACTCCTCGCCCGCTTTGTCATCGACGAGGCTCAC
TGCATCTCACAGTGGGGCCATGACTTCCGCCCGGACTATCTCATGCTCCG
CTCCATCCGCGATAAATTTCCCAGCATTCCTATCATGgcTTTGACTGCTA
CAGCCAATCAACGCCTGCTCGAGGACGCGACTTGAATGCAAGACGCCTCC
CAgtGCAACCACCGCATTTTTGGACACCGCTCCTTCCGCctggggcagga
gaaggtggtggaggcagcgCTCTCCCTGCGCGacgtcttcgtcctcatgc
ccacagggggaggaaagagcctCTGCTACCAGTTGCCTGCCTGCTTGACG
CCGGgcatCACGGTTGtcttctcgcccctcctctcgctcATTCAAGACCA
AGTGGAAGGGCTCCGGGAAAACGGCGTGGACGCTGCACAGCTGACGTCCC
ACCAGGATTATGAAACTGAGGGCAGGGAAATCATGGATCGTCTCTAccat
ctccccgcccacggAAGTCTGAAGCTTTTGTACATCACCCCGGAGAAATT
CGCACGGTCGGACGCCATGGTCAAATGCCTGCAGCGGCTGAAGGACCGCG
GACTCCTCGCCCGCTTTGTCATCGACGAGGCTCACTGCATCTCACAGTGG
GGCCATGACTTCCGCCCGGACTATCTCATGCTCCGCTCCATCCGCGATAA
ATTTCCCAGCATTCCTATCATGgcTTTGACTGCTACAGCCAATCAACGCC
TGCTCGAGGACGCGACTTGAATGCAAGACGCCTCCCAgtGCAACCACCGC
ATTTTTGGACACCGCTCCTTCCGCctggggcaggagaaggtggtggaggc
agcgCTCTCCCTGCGCGacgtcttcgtcctcatgcccacagggggaggaa
agagcctCTGCTACCAGTTGCCTGCCTGCTTGACGCCGGgcatCACGGTT
GtcttctcgcccctcctctcgctcATTCAAGACCAAGTGGAAGGGCTCCG
GGAAAACGGCGTGGACGCTGCACAGCTGACGTCCCACCAGGATTATGAAA
CTGAGGGCAGGGAAATCATGGATCGTCTCTAccatctccccgcccacggA
AGTCTGAAGCTTTTGTACATCACCCCGGAGAAATTCGCACGGTCGGACGC
CATGGTCAAATGCCTGCAGCGGCTGAAGGACCGCGGACTCCTCGCCCGCT
TTGTCATCGACGAGGCTCACTGCATCTCACAGTGGGGCCATGACTTCCGC
CCGGACTATCTCATGCTCCGCTCCATCCGCGATAAATTTCCCAGCATTCC
TATCATGgcTTTGACTGCTACAGCCAATCAACGCCTGCTCGAGGACGCGA
CTTGAATGCAAGACGCCTCCCAgtGCAACCACCGCATTTTTGGACACCGC
TCCTTCCGCctggggcaggagaaggtggtggaggcagcgCTCTCCCTGCG
CGacgtcttcgtcctcatgcccacagggggaggaaagagcctCTGCTACC
AGTTGCCTGCCTGCTTGACGCCGGgcatCACGGTTGtcttctcgcccctc
ctctcgctcATTCAAGACCAAGTGGAAGGGCTCCGGGAAAACGGCGTGGA
CGCTGCACAGCTGACGTCCCACCAGGATTATGAAACTGAGGGCAGGGAAA
TCATGGATCGTCTCTAccatctccccgcccacggAAGTCTGAAGCTTTTG
TACATCACCCCGGAGAAATTCGCACGGTCGGACGCCATGGTCAAATGCCT
GCAGCGGCTGAAGGACCGCGGACTCCTCGCCCGCTTTGTCATCGACGAGG
CTCACTGCATCTCACAGTGGGGCCATGACTTCCGCCCGGACTATCTCATG
CTCCGCTCCATCCGCGATAAATTTCCCAGCATTCCTATCATGgcTTTGAC
TGCTACAGCCAATCAACGCCTGCTCGAGGACGCGACTTGAATGCAAGACG
CCTCCCAgtGCAACCACCGCATTTTTGGACACCGCTCCTTCCGCctgggg
caggagaaggtggtggaggcagcgCTCTCCCTGCGCGacgtcttcgtcct
catgcccacagggggaggaaagagcctCTGCTACCAGTTGCCTGCCTGCT
TGACGCCGGgcatCACGGTTGtcttctcgcccctcctctcgctcATTCAA
GACCAAGTGGAAGGGCTCCGGGAAAACGGCGTGGACGCTGCACAGCTGAC
GTCCCACCAGGATTATGAAACTGAGGGCAGGGAAATCATGGATCGTCTCT
AccatctccccgcccacggAAGTCTGAAGCTTTTGTACATCACCCCGGAG
AAATTCGCACGGTCGGACGCCATGGTCAAATGCCTGCAGCGGCTGAAGGA
CCGCGGACTCCTCGCCCGCTTTGTCATCGACGAGGCTCACTGCATCTCAC
AGTGGGGCCATGACTTCCGCCCGGACTATCTCATGCTCCGCTCCATCCGC
GATAAATTTCCCAGCATTCCTATCATGgcTTTGACTGCTACAGCCAATCA
ACGCCTGCTCGAGGACGCGACTTGAATGCAAGACGCCTCCCAgtGCAACC
ACCGCATTTTTGGACACCGCTCCTTCCGCctggggcaggagaaggtggtg
gaggcagcgCTCTCCCTGCGCGacgtcttcgtcctcatgcccacaggggg
aggaaagagcctCTGCTACCAGTTGCCTGCCTGCTTGACGCCGGgcatCA
CGGTTGtcttctcgcccctcctctcgctcATTCAAGACCAAGTGGAAGGG
CTCCGGGAAAACGGCGTGGACGCTGCACAGCTGACGTCCCACCAGGATTA
TGAAACTGAGGGCAGGGAAATCATGGATCGTCTCTAccatctccccgccc
acggAAGTCTGAAGCTTTTGTACATCACCCCGGAGAAATTCGCACGGTCG
GACGCCATGGTCAAATGCCTGCAGCGGCTGAAGGACCGCGGACTCCTCGC
CCGCTTTGTCATCGACGAGGCTCACTGCATCTCACAGTGGGGCCATGACT
TCCGCCCGGACTATCTCATGCTCCGCTCCATCCGCGATAAATTTCCCAGC
ATTCCTATCATGgcTTTGACTGCTACAGCCAATCAACGCCTGCTCGAGGA
CGCGACTTGAATGCAAGACGCCTCCCAgtGCAACCACCGCATTTTTGGAC
ACCGCTCCTTCCGCctggggcaggagaaggtggtggaggcagcgCTCTCC
CTGCGCGacgtcttcgtcctcatgcccacagggggaggaaagagcctCTG
CTACCAGTTGCCTGCCTGCTTGACGCCGGgcatCACGGTTGtcttctcgc
ccctcctctcgctcATTCAAGACCAAGTGGAAGGGCTCCGGGAAAACGGC
GTGGACGCTGCACAGCTGACGTCCCACCAGGATTATGAAACTGAGGGCAG
GGAAATCATGGATCGTCTCTAccatctccccgcccacggAAGTCTGAAGC
TTTTGTACATCACCCCGGAGAAATTCGCACGGTCGGACGCCATGGTCAAA
TGCCTGCAGCGGCTGAAGGACCGCGGACTCCTCGCCCGCTTTGTCATCGA
CGAGGCTCACTGCATCTCACAGTGGGGCCATGACTTCCGCCCGGACTATC
TCATGCTCCGCTCCATCCGCGATAAATTTCCCAGCATTCCTATCATGgcT
TTGACTGCTACAGCCAATCAACGCCTGCTCGAGGACGCGACTTGAATGCA
AGACGCCTCCCAgtGCAACCACCGCATTTTTGGACACCGCTCCTTCCGCc
tggggcaggagaaggtggtggaggcagcgCTCTCCCTGCGCGacgtcttc
gtcctcatgcccacagggggaggaaagagcctCTGCTACCAGTTGCCTGC
CTGCTTGACGCCGGgcatCACGGTTGtcttctcgcccctcctctcgctcA
TTCAAGACCAAGTGGAAGGGCTCCGGGAAAACGGCGTGGACGCTGCACAG
CTGACGTCCCACCAGGATTATGAAACTGAGGGCAGGGAAATCATGGATCG
TCTCTAccatctccccgcccacggAAGTCTGAAGCTTTTGTACATCACCC
CGGAGAAATTCGCACGGTCGGACGCCATGGTCAAATGCCTGCAGCGGCTG
AAGGACCGCGGACTCCTCGCCCGCTTTGTCATCGACGAGGCTCACTGCAT
CTCACAGTGGGGCCATGACTTCCGCCCGGACTATCTCATGCTCCGCTCCA
TCCGCGATAAATTTCCCAGCATTCCTATCATGgcTTTGACTGCTACAGCC
AATCAACGCCTGCTCGAGGACGCGACTTGA back to top
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