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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100557g5.10090.mrna |
| Orig protein id | gnl|cribi|Naga_100557g5.10090 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:145850..149027 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4711 ID=rna4711|Name=rna4711|organism=Nannochloropsis gaditana|type=mRNA|length=2646bp
ATGCTGGGGATAAACGTGCCATCCTTTCGATACACCTTCCAGACGCTCAG
GTACATCACATTCCACCTCTCTTCCACAAACCCTTGGGAACTCCTGATCG
GCATCCCCGTTTTGGTCCTTGTCTCCGGCGTCGCGGCGTGGAAGAAACGT
CCGCCCACGGGCACCAGCTGGGACCGGTTCGGGCGCCGCCTGGCCATCGC
CTTGCCCCTCCTCGTAGTTCTCTACTCCACCATCCTGGCTTACCACCTGT
ACGAGCGACACCACCTGCCCATCAAACTGTCTTACGCCCACAAAGGCCGG
TACGAGGTCGGGGTCGACCAGGAACTCAGTGCCTTAGGTCTGAGTAACAT
GGTGGGCTCATGCTTCGGCGGCTTCGTCGCCGTCTCCAGCTATGCGCGGG
CCTCGGTCAATTACGAAGCGGGTGGACGTACCCAGATGTCCGCCCTTGTA
GCTTCCACCTTGGTCATCGTCGTCGTGCAATGGCTCTCTCCTGCGTTCTA
CTACGTGCCCATGTCCGGACTCGCCGCTCTACTCTGCGGAGCCCTGGTGT
CCTCCTTCACCGTCCAGCCTTTTTTCGAGACGTACCGGTCCAGCCCCCGA
GATTTCTTTGTCCTGGTGGCCACGTCTATCGTCATGTTCGTCGTCAGTGT
CGATACGGGGATCTACTCGGGCATCGGCCTCTCCATCTGCAACCTCCTCC
TTCAGTATTCCTACCCGGATCTAGAGGAGTTGGGTCGACTCTCAGGCGCC
CCCGGCAAGTGGCGGGCCGTAAAAAGGTATCGGCACGCAGTCACACCCCG
AAACATCCGGGTCTTGCGTTTGGACGAGGCCTTGACCTTTGTCAACGGAG
ACTTTGTCACCGGCCTGCTTCTGCGTGCGGCCAAAACGATGGAGGCGGAG
GCGAAGGGATTGAGCGGTCCCGAGGCCTCCATGCCACACGTGGTAAAGAC
AGCCCCGCACATGACCAGCCTGACGGTCGTATGCGCGTGTACACATGTGC
GGGGACATGGCAACACGACTCGTGACTGGATGCCTGGCTGTCAAGAAACG
TTGGGCAGTGAAGGTGTGCAACGGGGAAGTGCCGGCTGGACATCGCCCAC
GGCGACCACAATACAGGAAATGGAGTCTCAACGCGTTGCCTTGCCGGATG
ATAACCGCACAGACAGCCTCGCGTCACGGTGTCTTCCCTTTCAAAGAAAG
AGAAAGGATGGGGACGGTCGAGAAGCCAAAAAATGCTGCCATCTCTTCAT
TGTCCTGGATGCCTCGGGCATAAATTTCATGGACTTCAGTGGATTGCGTG
CGCTTGGAAAAGTTGCCAAAGATATGCGAGATCACGGCGTCCGCCTCCTT
ATTGCCCAAGCCAAAAGCCGCCTGCAGGACATGTTGCAGACGGCTCCCAC
CCTGTACCACGATGTGGGCGGGGACAAAATAAAACTCTCGCTCGAAGATC
TCGTGTACCTCCTCGAACGTCATGAAATGCGACTACACGGGTCCTTGTTT
GCCTCCACGCGTGAAGACGGAAACAAGCCTCAGAAAGTAGCTGCTGGCTG
CTGAGGTGCTGTCATGGGCGGTAAAGTTTTCTTTGTAGTGTGTGGGTGCT
TTTTATTTTTTATTTTTATTTTATTTTTTTTGTAAAGTTTTCTTTGTAGT
GTGTGGGTGCTTTTTTAGCAAATGGGGAAAATTATGTACCAGGGACGTTT
ACAGCCACAAGAACCTAATCGCAGCTGTAAAGGCCTTGCGCAACGAGGCC
TCTCTTCTCCAACGGCTGGCAGACCGCAGCGTCAGGAAGGGGGTAGAGCA
GCTGTTAGGACTCGCCGAGTACCAGATCTCTGGGGACGGGAAGCCATTTC
TTTCTCGGTATGAGAGCGATGCAGACCAGGGCAACGGGGAGAGCAGCATA
CTTAGCCCTGGCAGCTAAACGCGGGGTATGCCCAGGGAGGTCGAGCAGAG
GGCTGTGTTAGCAATGCAACGGTACTGGCCCCAGGCTGAGCATGTGGATC
GGATTCAGGGTACGAAGGGTGTAAAGGAGCTTGTTGGCTTGCTGATCAGG
AATGTAGCAGTGCAGGGATGCATCGTTGTGAGTGACATATGGGCGCTGGA
GTCAGGAGTGGGGGAAGAACCGGTAGCAGGTGGGAACCACGGCACTTCAT
TGTTGATAGATCATACAGAGGGGATAGTGTTGGGGGATACAATCGAGGAG
AGTCCAAACGAAACTTGCCCTATTGCCAATGCAGCCCTCCGATCATTCCT
TGGATAGGTTGCTTCCTTAGTTGTATACACAGCCGAGGTCCACACAGCGG
CTGTTCACGAGTCGAAAACATGGGGTATGCCGGTCGTATGTGAGCTTGTC
ACAGAGGCGTTTCCATTGGCAGTTGAAGAAGTTTAAAGGGAGATAGCGAC
GCGCGAGGCTTGAATATGCCCCCTGTTAGGCCGTTTAGATCCACAAAATG
TGCTTAAAACCCAGCATGGGCGAATAAAAAGCTCAATACTGGAGTGTTTG
ATGATATATACGTCGGTTCCTAATCCCAGCATTTTTCAGGCAAAGTAGTG
TGCAAGCTACCCGAAATCTGTCACGATGAGCTATTTTTTCCTTTTCCAAA
ATGCACAAATGCTCGCTCTTCACCGTTGAGCAGCCTACCCTCACCC back to topprotein sequence of rna4711 >rna4711-protein ID=rna4711-protein|Name=rna4711|organism=Nannochloropsis gaditana|type=polypeptide|length=464bp
MPFFPAKQDEMKRSFTCSNLIDLYEGQKVFLPDGNYKNGVSSTLNPQVRL
EYPPPFSTQPRAKRLHAAPRANDKIHAEMKDLKTHDEGVNAKAAMSQIDQ
SMPPPVPTFSSSSFPLPPSSGNRRNLYIHGSVILTACHHQQWKSSTKETA
ILKASNPTPAPFSTPSSSSSSSSSSSFLSSSLPPSPPSKPLSASSMALFR
RLGRSSSLTSLPPGVSPPCSPTLSDPPVPIFSQEVAPGRRSSNGSISALT
SLGSSSYGSGPPPLKSPWGAPPPRLAMEGGEAGGPCQEVGGGNGDGDGKS
VRRAQFLLMSSTSSSTSSLTSEGEEEEEEEEEEEEEGQLGGTTERVDSEE
SGREEECPEDLSQVALAVGQSKYGLFPSSSSRPAARPDPTPAKPSLPPSL
PPSLLPTCTRAPPQADSLLQHLWQLRVADPDPISGSRSLMSRQGGQRGRG
RGGERREVRVRVTV back to topmRNA from alignment at CM002464.1:145850..149027+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4711 ID=rna4711|Name=rna4711|organism=Nannochloropsis gaditana|type=mRNA|length=3178bp|location=Sequence derived from alignment at CM002464.1:145850..149027+ (Nannochloropsis gaditana)
GGTTGAAGTTGAAGTTTCGTCGCACGCCAAGTGCCAAACGAGCGAGAGCT
CTGGGCCTCCGTGAACACGTGGTAAACGCATATGTCCATGTCCTTTTGGC
GTCTTTCTGTATGTCAATATGACGACATACACGTAATCAACGCCACTACT
CGAGGATCGATCGAAAGGAAAGCTTTCATTTCATTTTCGTAGCTTGAATT
TCTGAGCCCATGGTAGGCGCACACGCACCCCCCTAGGCATCAGCCCCGCA
AGTTGAAAACGGAGAATGAATCGCGCATATCACGCCCGGTAAAAAAAGGT
TGAGCGCTGTTTGGCATGGAGTCAAAGCAATGGGACATGCAGAAAGATGT
CTGTCTGTCATGCTACATCGACGCCAGAGTTTTtttgagggggaaaaagt
gaAAATGGCGGTTTGCGTCAACTTACCACTTTGACGAACGTGACACCTGC
GGGTGTCAATTTCTGTGCCATCGTTCTCATCCGTAtgcctttttttcccg
cAAAGCAGGACGAAATGAAAAGGTCCTTCACATGTTCCAATCTTATAGAC
CTATACGAGGGCCAAAAAGTTTTTTTACCCGATGGAAACTACAAAAATGG
AGTAAGTAGCACCTTGAACCCTCAGGTCCGGCTTGagtatccccccccct
tttcgaCGCAGCCCCGGGCCAAGCGACTGCATGCGGCTCCAAGAGCGAAC
GATAAAATACACGCCGAAATGAAGGATCTCAAAACACATGACGAGGGTGT
CAACGCCAAAGCGGCCATGAGCCAGATTGATCAGAGTATGCCTCCGCCTG
TGCCcaccttttcttcttcgtccttccctcttcctccctcgagcGGGAAT
CGAAGAAATCTTTACATCCACGGCTCTGTCATCTTAACCGCTTGCCATCA
TCAACAATGGAAATCCAGTACAAAAGAAACTGCAATTTTAAAGGCAAGCA
ATCCGACACCCGCGCCATTCTCaaccccatcctcttcctcctcctcctcc
tcgtcgtccagctttctctcctcctccctgccgccttctcccccttccaa
gcctctgtctgcctcctccatggctcTTTTCCGACGCTTGGGCCGGTCGT
CCTCTCttacttccctcccacctggtgtttctccgccttgcTCTCCTACC
CTCTCGGATCCgcccgttccgatcttctcgCAGGAGGTAGCCCCGGGCCG
CAGGAGCAGCAACGGCAGTATATCTGCCCTCACTTCCTTAGGCTCCTCTT
CATATGGCTCGGGACCTCCTCCGTTGAAATCTCCTTGGGGGGCGCCCCCT
CCAAGGctggcgatggagggaggggaagcaggagggccTTGCCAGGAAgt
cggagggggaaatggcGATGGCGACGGCAAATCGGTGCGCCGGGCTCAAT
TTTTGCTCATGTCTTCCACTTCATCCTCCACTTCATCTCTGAccagcgag
ggggaggaggaggaggaggaggaggaggaggaagaggaggaagggcagtt
GGGAGGAACGACGGAGCGCGTGGAtagcgaggagagcgggagggaagaag
aatgCCCGGAGGATCTCTCCCAGGTGGCTCTTGCCGTAGGCCAGAGCAAG
TATGGCTTGTtcccgtcgtcttcctcgcgtcCCGCCGCCCGCCCAGACCC
GACCCCggccaagccctccctccctccctccctccctccctccctcctac
ccacCTGTACGCGGGCCCCACCACAAGCGGACTCCCTACTGCAACATTTG
TGGCAGTTGCGCGTGGCAGATCCGGACCCCATTTCCGGTTCTCGCTCCCT
CATGtccaggcaaggagggcaaaggggaaggggaagagggggagaaagga
gagaggttagggttagggttacaGTGTAGGTGCCACAGCGTGCTAGATGA
GCGGGAATCAAAGGCTGGATGCACCCCTATGCCTCGCCCGCATCCCCTGC
GGCCGTgacttgaaggaggggaggagggagggagggagggagggagggag
ggagggagggagggagggagggagggagggaggagtttTGTCATAGCTTT
GTCGGGTTCATGGGCCATGGAGGGGTATCCATGtgcgctctcctcctcaa
tcATGGTGTCTTTGTGGATAGAGAAGACGGTGTGTGGAGCAAGACGGTGT
GTGGGaaggcaggcgggagggatgcgaATCGAAaacaggagggcaagggg
taTGATGGAAATACAACCGTGGGCGGGCGAGTAGAGGTTGTTGCCACGTG
GCAGCAAGGGCAGGACTGTGCTCATTTTGAACGGAAGATAAAAGGGTACA
TTTGTGTGTATACACTGGGGACGATAAGGGGCTTTGTGAGGGGTTCGGGA
ATGGCAATCGTGTGCGTGGGACGAGGGATTTTTCGAGTTGCTCCTTGGTT
GCATAGACAATAAACGTtagaaagggaggacggccgAGTGGCATGATTCT
GCACACGGCGGGAGAGTCACCACCCCGCTTGTATTGGATGTGGGGAGAAC
TTGTAGATGCAGAGACTGTATGTTTGGATGTCGTGTAGAAAAAGCGGGGC
GGTGCCTGCGATCCTGCCGGACGCGTCGCTTCGTCCAATCGCTCAAATGA
GATGACCTCTTCCCAGTCCGTTGGGACAAAAGGGGCCAAGAAGATAAGAg
tcaaaggggaggaaaagtcGGGATTGTGGGGGCAAGGTCCAAGCTTCgaa
gggaggttgagggggacGCACACGCCCTGAGTCCGCTCCCAGGGGCAACG
ACTCTAGCTAGGCAAGCCCCTgcggtcgggagggggtTCGATATGTATGG
TTCTCCTTTCGAATGAGAATCCATGCGCCCCGGTATTTTTGTTGTGCACC
AGGCTCGGACTCGACAGGGGGCACGGGTTTTCCCAAAAAACATGTGACGG
GGGGGATGGATAGACGGGGACGCAGACGACACGACAGGCATCGGGTATCC
AAGCCCGGGAATTTCCTCCCGTTAAAAAATCATGATTAATTTGACTGCGC
CGGTCTGGCCCGTGCTCAATGTTCGTTTTTAAGTTGCGGAGACAGCACGG
TGGATCCTTACATCGCCTATGCACATTTTTTGAAAATTGTTACCGGCCAT
TGCCCCGATTTTccccccatttcccccctcccaatCCCCGCAATTCTGGG
CCCCTCGGTCCacacctctcccttctcc back to topCoding sequence (CDS) from alignment at CM002464.1:145850..149027+ >rna4711 ID=rna4711|Name=rna4711|organism=Nannochloropsis gaditana|type=CDS|length=1395bp|location=Sequence derived from alignment at CM002464.1:145850..149027+ (Nannochloropsis gaditana)
AtgcctttttttcccgcAAAGCAGGACGAAATGAAAAGGTCCTTCACATG
TTCCAATCTTATAGACCTATACGAGGGCCAAAAAGTTTTTTTACCCGATG
GAAACTACAAAAATGGAGTAAGTAGCACCTTGAACCCTCAGGTCCGGCTT
GagtatcccccccccttttcgaCGCAGCCCCGGGCCAAGCGACTGCATGC
GGCTCCAAGAGCGAACGATAAAATACACGCCGAAATGAAGGATCTCAAAA
CACATGACGAGGGTGTCAACGCCAAAGCGGCCATGAGCCAGATTGATCAG
AGTATGCCTCCGCCTGTGCCcaccttttcttcttcgtccttccctcttcc
tccctcgagcGGGAATCGAAGAAATCTTTACATCCACGGCTCTGTCATCT
TAACCGCTTGCCATCATCAACAATGGAAATCCAGTACAAAAGAAACTGCA
ATTTTAAAGGCAAGCAATCCGACACCCGCGCCATTCTCaaccccatcctc
ttcctcctcctcctcctcgtcgtccagctttctctcctcctccctgccgc
cttctcccccttccaagcctctgtctgcctcctccatggctcTTTTCCGA
CGCTTGGGCCGGTCGTCCTCTCttacttccctcccacctggtgtttctcc
gccttgcTCTCCTACCCTCTCGGATCCgcccgttccgatcttctcgCAGG
AGGTAGCCCCGGGCCGCAGGAGCAGCAACGGCAGTATATCTGCCCTCACT
TCCTTAGGCTCCTCTTCATATGGCTCGGGACCTCCTCCGTTGAAATCTCC
TTGGGGGGCGCCCCCTCCAAGGctggcgatggagggaggggaagcaggag
ggccTTGCCAGGAAgtcggagggggaaatggcGATGGCGACGGCAAATCG
GTGCGCCGGGCTCAATTTTTGCTCATGTCTTCCACTTCATCCTCCACTTC
ATCTCTGAccagcgagggggaggaggaggaggaggaggaggaggaggaag
aggaggaagggcagttGGGAGGAACGACGGAGCGCGTGGAtagcgaggag
agcgggagggaagaagaatgCCCGGAGGATCTCTCCCAGGTGGCTCTTGC
CGTAGGCCAGAGCAAGTATGGCTTGTtcccgtcgtcttcctcgcgtcCCG
CCGCCCGCCCAGACCCGACCCCggccaagccctccctccctccctccctc
cctccctccctcctacccacCTGTACGCGGGCCCCACCACAAGCGGACTC
CCTACTGCAACATTTGTGGCAGTTGCGCGTGGCAGATCCGGACCCCATTT
CCGGTTCTCGCTCCCTCATGtccaggcaaggagggcaaaggggaagggga
agagggggagaaaggagagaggttagggttagggttacaGTGTAG back to top
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