EWM25974.1, cds4699 (CDS) Nannochloropsis gaditana

Overview
NameEWM25974.1
Unique Namecds4699
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:146334..147728 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25974.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100557g5.10090.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:146334..147728 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25974.1 vs. NCBI_GenBank
Match: gi|585107869|gb|EWM25974.1| (hypothetical protein Naga_100557g5 [Nannochloropsis gaditana])

HSP 1 Score: 920.613 bits (2378), Expect = 0.000e+0
Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 0 
Query:    1 MPFFPAKQDEMKRSFTCSNLIDLYEGQKVFLPDGNYKNGVSSTLNPQVRLEYPPPFSTQPRAKRLHAAPRANDKIHAEMKDLKTHDEGVNAKAAMSQIDQSMPPPVPTFSSSSFPLPPSSGNRRNLYIHGSVILTACHHQQWKSSTKETAILKASNPTPAPFSTPSSSSSSSSSSSFLSSSLPPSPPSKPLSASSMALFRRLGRSSSLTSLPPGVSPPCSPTLSDPPVPIFSQEVAPGRRSSNGSISALTSLGSSSYGSGPPPLKSPWGAPPPRLAMEGGEAGGPCQEVGGGNGDGDGKSVRRAQFLLMSSTSSSTSSLTSEGEEEEEEEEEEEEEGQLGGTTERVDSEESGREEECPEDLSQVALAVGQSKYGLFPSSSSRPAARPDPTPAKPSLPPSLPPSLLPTCTRAPPQADSLLQHLWQLRVADPDPISGSRSLMSRQGGQRGRGRGGERREVRVRVTV 464
            MPFFPAKQDEMKRSFTCSNLIDLYEGQKVFLPDGNYKNGVSSTLNPQVRLEYPPPFSTQPRAKRLHAAPRANDKIHAEMKDLKTHDEGVNAKAAMSQIDQSMPPPVPTFSSSSFPLPPSSGNRRNLYIHGSVILTACHHQQWKSSTKETAILKASNPTPAPFSTPSSSSSSSSSSSFLSSSLPPSPPSKPLSASSMALFRRLGRSSSLTSLPPGVSPPCSPTLSDPPVPIFSQEVAPGRRSSNGSISALTSLGSSSYGSGPPPLKSPWGAPPPRLAMEGGEAGGPCQEVGGGNGDGDGKSVRRAQFLLMSSTSSSTSSLTSEGEEEEEEEEEEEEEGQLGGTTERVDSEESGREEECPEDLSQVALAVGQSKYGLFPSSSSRPAARPDPTPAKPSLPPSLPPSLLPTCTRAPPQADSLLQHLWQLRVADPDPISGSRSLMSRQGGQRGRGRGGERREVRVRVTV
Sbjct:    1 MPFFPAKQDEMKRSFTCSNLIDLYEGQKVFLPDGNYKNGVSSTLNPQVRLEYPPPFSTQPRAKRLHAAPRANDKIHAEMKDLKTHDEGVNAKAAMSQIDQSMPPPVPTFSSSSFPLPPSSGNRRNLYIHGSVILTACHHQQWKSSTKETAILKASNPTPAPFSTPSSSSSSSSSSSFLSSSLPPSPPSKPLSASSMALFRRLGRSSSLTSLPPGVSPPCSPTLSDPPVPIFSQEVAPGRRSSNGSISALTSLGSSSYGSGPPPLKSPWGAPPPRLAMEGGEAGGPCQEVGGGNGDGDGKSVRRAQFLLMSSTSSSTSSLTSEGEEEEEEEEEEEEEGQLGGTTERVDSEESGREEECPEDLSQVALAVGQSKYGLFPSSSSRPAARPDPTPAKPSLPPSLPPSLLPTCTRAPPQADSLLQHLWQLRVADPDPISGSRSLMSRQGGQRGRGRGGERREVRVRVTV 464
The following BLAST results are available for this feature:
BLAST of EWM25974.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107869|gb|EWM25974.1|0.000e+0100.00hypothetical protein Naga_100557g5 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4711rna4711Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications