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Properties
| Property Name | Value |
|---|
| Product | cycloartenol synthase |
| Orig transcript id | gnl|cribi|Naga_100315g4.5222.mrna |
| Orig protein id | gnl|cribi|Naga_100315g4.5222 |
| Gene | CAS |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:127808..129002 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4708 ID=rna4708|Name=rna4708|organism=Nannochloropsis gaditana|type=mRNA|length=785bp
CCCTTCCATCGCGACCTTCCTTCCAGAGTTCACCCGCACCTCTTTCCCTT
CCCTTGTGCTCCATATTCCTCCCCACGACCCATTTCTCTTCCCCTGCCTC
CCTTTCTTCCTCCCTCTCTCCCTCCCTCCTTCCCTCCCTCAGGGCCTGGT
GGCGGCCGGTGAAGACCCGCACGCCTCTGCGCCCATCCAGCAGGCACTGG
CCTTCCTCCTGTCTCATCAACGCCCGAACGGGGGATGGGGAGAGAGCTAC
CTGTCCTGCGTGGACAAAAGCTACCCGGAGGATGGAACGGGCCAGGGGCT
GGGGGAGGGCGGGAGTGGGGTGGTGCAGACGGCCTGGGGTCTCTTGGCCT
TGATGGCGGGCAAATGCCAGGACAAAGCAGCCTTAGAACGAGGCGTCCGG
TTCCTAATGGAAAGACAGGAGGAAGACGGGGACTGGGCGCAAGAAGGGAT
CACGGGGGTGTTCAATCGGAACTGTGGCATTACCTATACCCAGTACCGGA
ATATTTTTCCCTTGTGGGCGCTGGGGAGGTACGCACGTGAAGTGAAGGTG
TCGAAAGAGTGAAAAAAGGCAAAGGAGCGAGCTTGCGTGTATGGAATGGT
GGTGGAGAAAGATCGAGAAAGTGGGGTGCGAGCAAGAGATGGCGTAGTCG
CAGCTTCGACATGTCTTGAAAGCAATCTTGCTGAAACGTAAGGAGGGTGG
CATGCCCTGGTTGTGTGCAATTTGAAGCAAGCTGCTCCGTGTGAATGAAA
CAACGAACGCCAACGACAATCGCTAGTGGCCCAGG back to topprotein sequence of rna4708 >rna4708-protein ID=rna4708-protein|Name=rna4708|organism=Nannochloropsis gaditana|type=polypeptide|length=189bp
MVQREAMPGFWQTLLEKRGSSNGDACVMLPLLATILCILGASIYSSYIAR
PTSYPGGPRAQKQKRRAAWLPRSSIFSPGWVFAEAETSVAVTEREVLTLL
GEPVPLTGEAAGRQTWHWDPKKGKDLAGRKADYSFSAARNPNSADKVFRT
QQVNQWKGPRPNSKSRPKTAREAAHKAMAYYQMLQCEDG back to topmRNA from alignment at CM002464.1:127808..129002- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4708 ID=rna4708|Name=rna4708|organism=Nannochloropsis gaditana|type=mRNA|length=1195bp|location=Sequence derived from alignment at CM002464.1:127808..129002- (Nannochloropsis gaditana)
ATGTACAGGGTACGCACATCAGTATTCCGCAATGGTGCAGCGGGAGGCGA
TGCCGGGCTTCTGGCAGACTTTGCTGGAAAAACGCGGCTCCAGCAATGGT
GATGCATGCGTGATGCTTCCTCTACTTGCGACCATCCTATGCATCCTGGG
AGGTAGGTCACATGCGTGTTTACATTGATGCCGTACATAAATCTGCTTTT
TGTCGCCCGGCATGGCAAAGCCTAGGCTATCACTAGTACCCGGGGGGCTT
CGACCGTGTCGGGATGGTCCTTGCCAGGCGGGATGGTCGATCGTTCAATC
CACACCACGTTGTGTGAGCGAGTGTGTAGTCGTATATTAAGATGGCAATG
TATGTGTATATGTGTGTGCACACACATCCCATGATCGATGTTCGTTGCTC
TCCGGTTACACTACAAAGCGTGTGTGCTGCGTCTGGCTGAAGCCTGTTTT
TCCTCCCCCCTTCCTCACTATTGTCTGCCCTCCACAGCGAGCATCTACTC
CTCCTACATTGCCCGCCCAACCTCGTACCCGGGAGGACCACGGGCGCAAA
AACAAAAACGCCGGGCGGCATGGTTGCCCCGTTCCTCCATCTTCTCGCCC
GGTTGGGTGTTTGCTGAAGCGGAGACGTCAGTGGCAGTGACGGAACGGGA
GGTCTTGACGCTCCTGGGCGAGCCGGTACCCTTGACCGGGGAAGCGGCGG
GGCGGCAGACGTGGCATTGGGATCCGAAGAAAGGGAAAGACTTGGCCGGG
CGGAAAGCCGACTATAGCTTCAGCGCCGCCCGGAACCCGAACAGGTCCGG
CCTCGCCCCCCAAATCCCCGAGGGGGGAATCTTTTGTGTCCTTTTTTTAA
ATGGAGGGGGGGGGTATGACGCTTCCATTTCGTGGCTTGCTCGTATACCA
AGAGGTGTGCATGGGGCGCACTTGCGCGTCTGAGCCTTACTTCCGACTAC
CCACCTTTTGATATCCCTCCTTCCCGCCCTCCCTCCCGCCCTCCCTCCCG
CCCTCCTTCCCGCCCTCCCCTCCGCCTTCCTCCCCGCCTTCCCGTGCGAC
TAGCGCCGACAAGGTGTTCCGTACCCAGCAGGTCAATCAGTGGAAAGGTC
CCCGGCCGAACTCAAAATCGCGCCCGAAGACGGCGCGGGAAGCTGCACAC
AAGGCCATGGCGTACTACCAGATGCTGCAGTGCGAGGATGGGTAG back to topCoding sequence (CDS) from alignment at CM002464.1:127808..129002- >rna4708 ID=rna4708|Name=rna4708|organism=Nannochloropsis gaditana|type=CDS|length=1710bp|location=Sequence derived from alignment at CM002464.1:127808..129002- (Nannochloropsis gaditana)
CGCCGACAAGGTGTTCCGTACCCAGCAGGTCAATCAGTGGAAAGGTCCCC
GGCCGAACTCAAAATCGCGCCCGAAGACGGCGCGGGAAGCTGCACACAAG
GCCATGGCGTACTACCAGATGCTGCAGTGCGAGGATGGGTAGCGAGCATC
TACTCCTCCTACATTGCCCGCCCAACCTCGTACCCGGGAGGACCACGGGC
GCAAAAACAAAAACGCCGGGCGGCATGGTTGCCCCGTTCCTCCATCTTCT
CGCCCGGTTGGGTGTTTGCTGAAGCGGAGACGTCAGTGGCAGTGACGGAA
CGGGAGGTCTTGACGCTCCTGGGCGAGCCGGTACCCTTGACCGGGGAAGC
GGCGGGGCGGCAGACGTGGCATTGGGATCCGAAGAAAGGGAAAGACTTGG
CCGGGCGGAAAGCCGACTATAGCTTCAGCGCCGCCCGGAACCCGAACAGA
TGGTGCAGCGGGAGGCGATGCCGGGCTTCTGGCAGACTTTGCTGGAAAAA
CGCGGCTCCAGCAATGGTGATGCATGCGTGATGCTTCCTCTACTTGCGAC
CATCCTATGCATCCTGGGAGCGCCGACAAGGTGTTCCGTACCCAGCAGGT
CAATCAGTGGAAAGGTCCCCGGCCGAACTCAAAATCGCGCCCGAAGACGG
CGCGGGAAGCTGCACACAAGGCCATGGCGTACTACCAGATGCTGCAGTGC
GAGGATGGGTAGCGAGCATCTACTCCTCCTACATTGCCCGCCCAACCTCG
TACCCGGGAGGACCACGGGCGCAAAAACAAAAACGCCGGGCGGCATGGTT
GCCCCGTTCCTCCATCTTCTCGCCCGGTTGGGTGTTTGCTGAAGCGGAGA
CGTCAGTGGCAGTGACGGAACGGGAGGTCTTGACGCTCCTGGGCGAGCCG
GTACCCTTGACCGGGGAAGCGGCGGGGCGGCAGACGTGGCATTGGGATCC
GAAGAAAGGGAAAGACTTGGCCGGGCGGAAAGCCGACTATAGCTTCAGCG
CCGCCCGGAACCCGAACAGATGGTGCAGCGGGAGGCGATGCCGGGCTTCT
GGCAGACTTTGCTGGAAAAACGCGGCTCCAGCAATGGTGATGCATGCGTG
ATGCTTCCTCTACTTGCGACCATCCTATGCATCCTGGGAGCGCCGACAAG
GTGTTCCGTACCCAGCAGGTCAATCAGTGGAAAGGTCCCCGGCCGAACTC
AAAATCGCGCCCGAAGACGGCGCGGGAAGCTGCACACAAGGCCATGGCGT
ACTACCAGATGCTGCAGTGCGAGGATGGGTAGCGAGCATCTACTCCTCCT
ACATTGCCCGCCCAACCTCGTACCCGGGAGGACCACGGGCGCAAAAACAA
AAACGCCGGGCGGCATGGTTGCCCCGTTCCTCCATCTTCTCGCCCGGTTG
GGTGTTTGCTGAAGCGGAGACGTCAGTGGCAGTGACGGAACGGGAGGTCT
TGACGCTCCTGGGCGAGCCGGTACCCTTGACCGGGGAAGCGGCGGGGCGG
CAGACGTGGCATTGGGATCCGAAGAAAGGGAAAGACTTGGCCGGGCGGAA
AGCCGACTATAGCTTCAGCGCCGCCCGGAACCCGAACAGATGGTGCAGCG
GGAGGCGATGCCGGGCTTCTGGCAGACTTTGCTGGAAAAACGCGGCTCCA
GCAATGGTGATGCATGCGTGATGCTTCCTCTACTTGCGACCATCCTATGC
ATCCTGGGAG back to top
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