rna4706, rna4706 (mRNA) Nannochloropsis gaditana

Overview
Namerna4706
Unique Namerna4706
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length549
Alignment locationCM002464.1:123733..124811 -

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Properties
Property NameValue
Producthipothetical protein
Orig transcript idgnl|cribi|Naga_101364g1.6962.mrna
Orig protein idgnl|cribi|Naga_101364g1.6962
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:123733..124811 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101364g1gene4542Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4706rna4706-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25978.1cds4694Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4706 ID=rna4706|Name=rna4706|organism=Nannochloropsis gaditana|type=mRNA|length=549bp
ATGGGGACCAAAGCTTCGAAGCCGGTGGAAGCTGAGCAGCCAAAATTGGG
CAAAAGTGGAAAAAAAATCTGTTGCTCGTGCCCTGACACAAAAAAGATCA
GGGATGAATGTGTGGTGAACAAGGGCGAAGAGGCGTGCGCAGATGCCATT
GAAGCGCACAAGGCGTGTCTAAGAGCGGAGGGATTCAAAACAGTAACCCC
TGGGCATGCCAGTCTCAACAATTTAAGCTTTGTATCGTGGCCTGCCGTCC
AAAGGGTGCGGAAGAGGAGGAGGATGACAGAAGGTTTTTGGGACAGCTTC
CTCGCGATGGTGGCCTCTCACCTTGAGTCCACGAAAAAGGCGACAAAAGG
CGGGAAACCCAGCGATGATTTTGGCCCTGCCAAGAAAAGAGGAATCTACG
TACCCCGAAAGGAAGGCAGAGCATGCTTGAAGAGGGGAAAGAAAGGAGCG
GAAGGGTTTCTAGCAAATGAGGTCACTACACCAAAAGCAATTGCATCAAA
GACACCGCAACACGCAGGAGGGTTGATGGGGAATACAGGAGTAGGGTAA
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protein sequence of rna4706

>rna4706-protein ID=rna4706-protein|Name=rna4706|organism=Nannochloropsis gaditana|type=polypeptide|length=172bp
MINIAIEGFGIVREPGRSPHPVYYITVSQPAHAASWTVYRGLAAFRTLSD
GLRELIPGLRPCPNPLPGSVQGMAGLTGSTVDNLTVQGLHGGAQQLQAWL
QHARLFPAVEETSVYRAFCLDAANVPPPYLETIWGEGRGKGMGEGGTEGG
AGGRAGKGGGRGEGGWEGGRAG
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mRNA from alignment at CM002464.1:123733..124811-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4706 ID=rna4706|Name=rna4706|organism=Nannochloropsis gaditana|type=mRNA|length=1079bp|location=Sequence derived from alignment at CM002464.1:123733..124811- (Nannochloropsis gaditana)
CTGAGGAGGGTATCCTTGCTGCCTTGCCCGACTGATGTTCTGTTTACTTC
AGCTTGTCGCGCACGCTTCACGTGTTTTAATTCCCATCCCTCGTACAGCG
CACACTTCTTAGAAAACTGGCATCGTTGGTGAGCGCCTTGCTGGGAAAGT
GTGAGCACTGGGCTCTTTAGTCTACCTCTGTGAAAAACACAGGGGCCGAG
ATCACGAGGGGGGATGATAAACATCGCGATCGAGGGCTTTGGCATTGTGA
GGGAGCCTGGACGCTCCCCCCACCCTGTTTATTACATCACCGTCTCTCAG
CCTGCACATGCAGCGTCTTGGACGGTGTACCGGGGGCTGGCGGCTTTTCG
CACCCTCTCGGACGGGCTTCGCGAGCTGATCCCCGGCCTACGTCCCTGCC
CCAACCCGCTGCCGGGCTCCGTACAGGTACTTTTATGCTGGGAAAGAGGG
AGTCAGAGAGGGTAGTGGGATGGTCAGGGACGATGAATGAAGGAGAGGCG
CGTCGGGCAGGGTGCGGGCCTGCGGCGTAGGCGATAAAGATCGATGGGAG
GGGGGGGTCGGGAGGTAGACGCCACGGTAGGCAAGCCTGTTGTTCTTCGC
GCCTTTATTTCCTCTCCCGCGTCGCGTTTCTTCGATACAGGGAATGGCTG
GTCTGACCGGCAGCACGGTCGACAATTTGACGGTGCAAGGCTTGCATGGG
GGTGCACAGCAACTCCAGGTGGGGAGGGAGGGGAAGAGGGAGGGAGGAGG
GAGGGCGGATGGCTGTAGGGGAGAAGCATGGTTATCAGAAATTGCCCACG
TCAAGACGGAGTAAAGTCGTGGTAACTCGTGGTCCCTCCTCCCTCTGGGG
CAGGCCTGGCTGCAGCACGCCCGTTTGTTCCCCGCAGTGGAGGAGACGAG
CGTCTACCGCGCGTTCTGTCTCGATGCGGCTAACGTTCCCCCTCCTTACC
TCGAGACGATCTGGGGGGAGGGGCGGGGGAAGGGAATGGGCGAAGGAGGG
ACGGAGGGAGGGGCAGGGGGTCGGGCGGGGAAGGGAGGGGGGAGGGGGGA
AGGAGGGTGGGAGGGAGGGAGGGCGGGGA
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Coding sequence (CDS) from alignment at CM002464.1:123733..124811-

>rna4706 ID=rna4706|Name=rna4706|organism=Nannochloropsis gaditana|type=CDS|length=1551bp|location=Sequence derived from alignment at CM002464.1:123733..124811- (Nannochloropsis gaditana)
GCCTGGCTGCAGCACGCCCGTTTGTTCCCCGCAGTGGAGGAGACGAGCGT
CTACCGCGCGTTCTGTCTCGATGCGGCTAACGTTCCCCCTCCTTACCTCG
AGACGATCTGGGGGGAGGGGCGGGGGAAGGGAATGGGCGAAGGAGGGACG
GAGGGAGGGGCAGGGGGTCGGGCGGGGAAGGGAGGGGGGAGGGGGGAAGG
AGGGTGGGAGGGAGGGAGGGCGGGGAGGAATGGCTGGTCTGACCGGCAGC
ACGGTCGACAATTTGACGGTGCAAGGCTTGCATGGGGGTGCACAGCAACT
CCAGATGATAAACATCGCGATCGAGGGCTTTGGCATTGTGAGGGAGCCTG
GACGCTCCCCCCACCCTGTTTATTACATCACCGTCTCTCAGCCTGCACAT
GCAGCGTCTTGGACGGTGTACCGGGGGCTGGCGGCTTTTCGCACCCTCTC
GGACGGGCTTCGCGAGCTGATCCCCGGCCTACGTCCCTGCCCCAACCCGC
TGCCGGGCTCCGTACAGGCCTGGCTGCAGCACGCCCGTTTGTTCCCCGCA
GTGGAGGAGACGAGCGTCTACCGCGCGTTCTGTCTCGATGCGGCTAACGT
TCCCCCTCCTTACCTCGAGACGATCTGGGGGGAGGGGCGGGGGAAGGGAA
TGGGCGAAGGAGGGACGGAGGGAGGGGCAGGGGGTCGGGCGGGGAAGGGA
GGGGGGAGGGGGGAAGGAGGGTGGGAGGGAGGGAGGGCGGGGAGGAATGG
CTGGTCTGACCGGCAGCACGGTCGACAATTTGACGGTGCAAGGCTTGCAT
GGGGGTGCACAGCAACTCCAGATGATAAACATCGCGATCGAGGGCTTTGG
CATTGTGAGGGAGCCTGGACGCTCCCCCCACCCTGTTTATTACATCACCG
TCTCTCAGCCTGCACATGCAGCGTCTTGGACGGTGTACCGGGGGCTGGCG
GCTTTTCGCACCCTCTCGGACGGGCTTCGCGAGCTGATCCCCGGCCTACG
TCCCTGCCCCAACCCGCTGCCGGGCTCCGTACAGGCCTGGCTGCAGCACG
CCCGTTTGTTCCCCGCAGTGGAGGAGACGAGCGTCTACCGCGCGTTCTGT
CTCGATGCGGCTAACGTTCCCCCTCCTTACCTCGAGACGATCTGGGGGGA
GGGGCGGGGGAAGGGAATGGGCGAAGGAGGGACGGAGGGAGGGGCAGGGG
GTCGGGCGGGGAAGGGAGGGGGGAGGGGGGAAGGAGGGTGGGAGGGAGGG
AGGGCGGGGAGGAATGGCTGGTCTGACCGGCAGCACGGTCGACAATTTGA
CGGTGCAAGGCTTGCATGGGGGTGCACAGCAACTCCAGATGATAAACATC
GCGATCGAGGGCTTTGGCATTGTGAGGGAGCCTGGACGCTCCCCCCACCC
TGTTTATTACATCACCGTCTCTCAGCCTGCACATGCAGCGTCTTGGACGG
TGTACCGGGGGCTGGCGGCTTTTCGCACCCTCTCGGACGGGCTTCGCGAG
CTGATCCCCGGCCTACGTCCCTGCCCCAACCCGCTGCCGGGCTCCGTACA
G
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Synonyms
Publications