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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100151g4.9620.mrna |
| Orig protein id | gnl|cribi|Naga_100151g4.9620 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:115296..116311 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4702 ID=rna4702|Name=rna4702|organism=Nannochloropsis gaditana|type=mRNA|length=3993bp
ACCGTGTGATACTGTTGTGGTGATCACAGCTTTGAGTGTGCATCTACAGC
CCTTCACTTGGTAGATGCGGTAATTAGTCCAGGCGGGTAATTCGCCACCA
GGAATGTTCGTCGTACCCCGACTTGCTTCAGATATCTATCAGATGTAGTT
TTTCTCTTTACATTACCTTGTTCGCATCCAATGTACGTCGGCATGCACAA
GGCAGTATTGGTCTAGATACGGCAGCTTACGGCAGAATATCCAGAGACCA
GTCATCCATGTGCCATGTCTCAAGCTTTTTCAGTTCGAGTTCATGAAGCG
GACGATGATGAAGAACAGCATTTGAAAGGAGAATTCTACGACACCGAGGG
CAGAATATCTACCAATGTTGGCATGCAGTCTCTGGAAGACCACAATCGTG
AAATACAGAGAACCATCGAGGCATTCAGGAGTGCCTCCCATACTCTGAGC
GTCCGCTCCTTGGGCTCGGAAGGAAATTCGAAGAGCCAAGTGCCAAATTT
GCAAAGCGTGTTCGACAGCTTGCAGATCACTTCACAGGAGGGCAAGGCAG
ACGACAGGATGAGCACTGCAGACAACGGCGACGGGCCAAAAAGCGTGGCC
GCCATGGCGAAAGCCTTGGCTGCCCAGCGTGGCGAGGAGTACGTGCATGA
CTTGCTCAAGGGCGAGTTTTATGACGACGGGGGGCGCATTACTACGAACG
CGGGTATGCAGTCGGAGGAAGACCACGAGCGTGAGATTCAGCGCACGATC
CAGATGGTGCGAAGCGCCACACACGCTCTGAGCGTCCGGTCGCAGGGGTC
GGAACAGCGCTCGATGAGTCGGATGCAAAGTCTCCGTGCCGTCTTCTCCA
GCCGGGAGGACAAGGAGGAGGAAGCAAAGGTGCCTTTGGACGACCTCTTC
GACGAGAACGACGTGCCTGTCACCATGACGCGGACCAAGACCGTGACCTC
CCTGGACTCGGAGGGCTTATCCTCCGCCCTGGCCGCGGAACTCCTCAAAA
AATTTGGCCGCAACGAGCTGCCCGAAAAGAAGAAACCAAAGTGGCTTATT
TTCCTTGAGCAACTTTACCAACCCATGCCTCTGATGATCTGGGCTGCCAT
CATCATCGAGGCGGCCATCGAGTCGTGGCCCGACATGGGCATTCTCCTCG
GAATCCAGTTTATGAACGCCTCCCTTTCCTACTACGAGACCACCAAGGCC
GGCGACGCCGTTGCGGCCCTCAAAGCCTCCTTGAAACCCCTAGCTTACGT
GAAGCGTGACGGAAAATTCCTGTCCATGGACGCGGCTCTCTTGGTGCCCG
GTGACCTGGTCTTGCTGGGGGCCGGGGGCGCCATTCCCGCCGACTGTGTC
GTGAAGGACTCTCAGATCGATGTCGACCAGGCTGCGTTGACGGGCGAGTC
TCTCCCCGTGACTTTTTTCAAGGGCGACAGTGTGAAAATGGGTTCCACCG
TGGTCCGCGGTGAGGTCGAGGCAACAGTGGAGGCGACTGGTGCCAACACT
TTCTTCGGGCGTACGGCGGCTCTCCTCACCGGTGGGGACGAGGTCTCCAA
CTTGCAGAAACTTTTGATGCGAATTATGATCATCCTCGTCGTCCTCTCCA
TGGCCCTTTGCGGTATCGCCTTTGGCTATCTCTTATCGCGAGGCGAGACT
GTCCGTGAGTCACTTTCCTTCACGGTGGTGCTCCTGGTCGCCTCCATCCC
CATTGCCATTGAGATTGTCTGCACCACCACCCTCGCCCTCGGCTCCCGCG
AACTCGCCAAGGATGGCGCCATCGTCTCCCGCTTGGCCGCCATCGAGGAC
ATGGCCGGGATGAGCATCCTGTGCTCGGACAAGACGGGGACCTTGACCTT
GAACAAGATGATGATCCAAGAGGAGACCCCCATCTACGTGGAGGGAGAGA
CCCAGTATACGGCGTTGCGATTCGCGGCAATGGCCTCCAAGTGGAACGAG
CCCGCCCGTGACGCCCTTGACACCCTGGTCCACGGCGCAGCGGACTTGAA
ATCCTTGGCGGACGTGCAACAGATTGACTACATGCCTTTTGACCCCACCA
TCAAGCGCACGGAGGGGACCATCCGATTGCCCAGCGGCGAGACCTTCAAG
GTCAGCAAGGGTGCCCCGCATATTATCATGGGCTTGTTGGATCAGACCGC
CCAGGCGAGCGTAATCGAGCAATGCGAAAAAGACGTGGAAGGGTTGGGAG
AGCGTGGCATTCGTTCTTTGGCCGTGGCCAAGACCAAGGGCAGCGCGGAC
GGCCCTTGGGAACTGATTGGGCTCTTGACTTTCTTGGACCCCCCCCGCCC
CGACACCAAAGACACGATCGACCGGGCGCGAGACTTTGGCGTGGAGGTGA
AAATGATCACAGGCGACCACCTCTTGATCGCCAAGGAAACCGCGCGTCAG
TTGGGGATGGGCACGCACATCGAGAACGCTGGGAAATTGCCCAAGCTGGG
CGAAGACCGAAAAGCGCCCGCGAATCTGATGGATTTCTTTTCCTACGTAG
AGGAGACGTCTGGTTTTGCCCAGGTCTTCCCCGAGCACAAATTTTTGATC
GTCGAGGTTCTCCGCCGCGGCGGGTACAAGACTGGTATGACTGGTGATGG
TGTCAACGACGCTCCTGCCCTGCAGCGCGCGGATGTGGGTGTGGCTGTGC
AGGGTGCTACGGATGCCGCCCGTGCTGCCGCAGACATCGTCTTGACCAAG
CCCGGTCTCTCCACCATCGTCACCGCCATCATTGTGGCCCGTACTGTCTT
CGGGCGCATGACCTCATTCATCACCTACCGTATCGCCGCCACCCTGCAGC
TCCTGATCTTCTTCTTCATCGCCGTGCTTACCATGTACCCCAGGGATTTC
CAGCCTGAAAGTGCTTTGGAGGAGTGGCCCGCATTCTTCCACATGCCTGT
GATGATGCTTATGCTTATCACCCTCCTGAACGACGGCACGCTCATCTCCA
TTGGCTACGACAACGTGGTGCCCAACACCACCCCCGACAAGTGGAACCTG
AAGGTACTGTTCACAATTGCCGGCGTGCTGGGCGGTGTGGCTCTGTTGTC
TTCCCTGTTGATGCTGTGGGTGGCGCTCAACTCGCACAACCCTGCAGGGA
TCTGGGCGAAGGCGGGTCTGGCGGGGCTTACCTACGGACAGATCACGTCG
ATGGTGTACTTGAAGGTATCGATCTCTGATTTCTTGACGCTCTTCTCTTC
TCGCTCTGGGGGTGGTTTCTTCTGGACAAATAAGCCGTCTGGAATCTTGC
TGGTGGCTGCGGGTATTGCCTGCTCGCTGTCGACGATCATGGCGAACGCG
TGGCCGGAGTCCAGGCCTGATGGCGTGCCTACGATTGGCCTGGCTCGCGT
GGCCCCCAAGGAACTGTCTCTGTACGTCTGGATCTACTGCTTGCTGTGCT
GGTTCATCCAGGACGCCGCCAAGGTGGGCGCTTACGCCCTTCTGAAGAGG
AACAATATCTTCGGGATCAACGATGTCGTTGCGATGAAGAAGGCTGACCC
CTCCACGGCAGTTTAAAGAAGAGATTTAGGCGAATCAGGTAAAGTCTCGT
CTCGATTTATATATACGTACCCCTACAATACTTTCTTTGAATTAGAGGCG
GTGCCCGATCTGGAAGGGGAAACAGTAATATACGCGACGGAGATGGACTT
TTGAGCAAGCATAAAGTGCGATATGAGGGTATAGATATTAAACCAACGAT
ATTTACACGGATAGGAGCTGAAGTAGTAATATGTGTATGGAAAAGATAGG
AAGAATTTTGGAGAACACAGAGGGCTTCAGGGTGCTATCGATTATAGAGC
CGAAAGGAATGAAACGACGGTCCGTACTCCTTTGACACCCTTTCAAAATA
TACGAGGGCTGCAGGTCCACAGAACTCTAGGATTCGAAAGCAGAATTGAA
TGGGAACTCAGAAGTTGAGTCGTATGTGGCGAAATGGCGAGGTGCGCGAC
TACCAGGCGCAAAAGGAATCAAAACTTGATGGAACTCAGGAGT back to topprotein sequence of rna4702 >rna4702-protein ID=rna4702-protein|Name=rna4702|organism=Nannochloropsis gaditana|type=polypeptide|length=271bp
MGKQRLVRGVHGIGRTPHRLLAVLSVSLFAYSRQTVSAFLLPAVSSHSSA
TKLSAVSNRYDDCVSRAISIQVASVAILAFVASPSIAAVPTLQEYYGEEG
AQPKTNNFILNSKRQKQQGEKSANNAASSVAETASPSDPEELIESMTDTL
YALSPLIKKEGWDDVLAAVKRKPLCLLLTPFLGYGNAAELAKALGGDLKK
SRALEERRQEASVALQQLVDYAFSNRVIFFNSLDKQQVTALASGRAPPDL
SEPLGLLEDTVGLVKALQETL back to topmRNA from alignment at CM002464.1:115296..116311- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4702 ID=rna4702|Name=rna4702|organism=Nannochloropsis gaditana|type=mRNA|length=1016bp|location=Sequence derived from alignment at CM002464.1:115296..116311- (Nannochloropsis gaditana)
GAGAGCGACGACAGCAGTCGAGGACTGAAACCAGAAAATAATGACCGTGC
TCGACCAAAGAAAGCTTCTTCACGCCTGGCTTGGACAGTAAGAGTAAGTC
TTCTCACAACCTTATCCATTAAATAATAACAGAGGTGCGATCGTGGACGC
TGGAGAATGGGGAAACAAAGGCTCGTTAGAGGTGTTCATGGCATTGGTCG
AACCCCGCACCGCCTGCTCGCAGTCCTTTCCGTGTCACTATTTGCCTATT
CACGGCAGACGGTCTCTGCTTTTCTATTGCCAGCGGTATCATCGCACTCC
TCTGCCACAAAGCTGTCTGCCGTATCGAACAGATACGACGACTGTGTAAG
TAGAGCCATCTCCATCCAGGTCGCGTCAGTCGCCATCCTTGCCTTTGTGG
CTAGCCCGTCTATTGCAGCTGTGCCCACATTACAGGAATACTACGGCGAG
GAAGGCGCCCAACCGAAAACTAATAATTTTATCTTGAATAGCAAAAGACA
AAAGCAACAAGGTGAGAAAAGCGCCAACAATGCGGCGTCTAGCGTGGCCG
AGACCGCTTCGCCCTCGGATCCTGAAGAGCTGATAGAGAGCATGACAGAC
ACCTTGTATGCTTTGTCACCCCTGATAAAGAAGGAAGGATGGGACGATGT
GCTAGCAGCTGTAAAAAGGAAGCCATTGTGTCTCCTGTTGACTCCCTTTC
TGGGTTACGGAAACGCCGCTGAGCTTGCGAAAGCGTTGGGGGGGGACCTG
AAAAAGAGCCGAGCCTTGGAAGAACGTCGGCAAGAAGCAAGTGTGGCGCT
TCAACAACTGGTGGATTACGCCTTTTCCAACCGAGTCATCTTTTTCAACT
CCCTCGACAAGCAGCAAGTGACCGCCTTGGCCTCGGGCCGTGCCCCCCCG
GATCTAAGTGAACCTCTGGGTCTACTTGAAGACACTGTGGGACTCGTGAA
AGCCCTACAAGAAACGCTGTGATTGACAAAAGTACGCCACAAAGTAAGAA
ACAAATGGCAAAATTG back to topCoding sequence (CDS) from alignment at CM002464.1:115296..116311- >rna4702 ID=rna4702|Name=rna4702|organism=Nannochloropsis gaditana|type=CDS|length=816bp|location=Sequence derived from alignment at CM002464.1:115296..116311- (Nannochloropsis gaditana)
ATGGGGAAACAAAGGCTCGTTAGAGGTGTTCATGGCATTGGTCGAACCCC
GCACCGCCTGCTCGCAGTCCTTTCCGTGTCACTATTTGCCTATTCACGGC
AGACGGTCTCTGCTTTTCTATTGCCAGCGGTATCATCGCACTCCTCTGCC
ACAAAGCTGTCTGCCGTATCGAACAGATACGACGACTGTGTAAGTAGAGC
CATCTCCATCCAGGTCGCGTCAGTCGCCATCCTTGCCTTTGTGGCTAGCC
CGTCTATTGCAGCTGTGCCCACATTACAGGAATACTACGGCGAGGAAGGC
GCCCAACCGAAAACTAATAATTTTATCTTGAATAGCAAAAGACAAAAGCA
ACAAGGTGAGAAAAGCGCCAACAATGCGGCGTCTAGCGTGGCCGAGACCG
CTTCGCCCTCGGATCCTGAAGAGCTGATAGAGAGCATGACAGACACCTTG
TATGCTTTGTCACCCCTGATAAAGAAGGAAGGATGGGACGATGTGCTAGC
AGCTGTAAAAAGGAAGCCATTGTGTCTCCTGTTGACTCCCTTTCTGGGTT
ACGGAAACGCCGCTGAGCTTGCGAAAGCGTTGGGGGGGGACCTGAAAAAG
AGCCGAGCCTTGGAAGAACGTCGGCAAGAAGCAAGTGTGGCGCTTCAACA
ACTGGTGGATTACGCCTTTTCCAACCGAGTCATCTTTTTCAACTCCCTCG
ACAAGCAGCAAGTGACCGCCTTGGCCTCGGGCCGTGCCCCCCCGGATCTA
AGTGAACCTCTGGGTCTACTTGAAGACACTGTGGGACTCGTGAAAGCCCT
ACAAGAAACGCTGTGA back to top
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