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Properties
| Property Name | Value |
|---|
| Product | cral trio domain containing protein |
| Orig transcript id | gnl|cribi|Naga_100003g2.1739.mrna |
| Orig protein id | gnl|cribi|Naga_100003g2.1739 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1174294..1177055 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna470 ID=rna470|Name=rna470|organism=Nannochloropsis gaditana|type=mRNA|length=2587bp
GCGCGAAAACGCCGACCAGAAAAAGGAGACACAGGAGGCTCGATGCCCGG
GCTTCCGTGTGGTCTTGCCATGGCATCTATGCGAGTCTGACGTCCGTCCT
GGTTGCCCCGTTTGCGTCACGCTTTTTTGGAATGATAGGGAGGCCTTGAG
ATCCGCTTGCTTGCCACTGGACGGCCCCTGCACCACTCCCTCGTCCAGCG
TGTCCTCCATCCTCGTGTCATCGGCAGAAAAAGGCGGCCCGCCGAGCGTG
CACCACAGTCAACCAACACTGTTCCATGCCTGCATTACTGGCCTCTACCC
AACATCCTTCCGACCACATCCATCTACGATTTATTTTTGCTAACCATGAT
GGTGTATCTGTGGAGCTTTCAGTTCCGCTCGGCATAAGGGTGTCGGAGCT
GAAAAGCCGCCTGAGGGAGGCATGGCCAGAAGAGCTGCATACCGACACGA
GTAGTGGCGGTGGCGTTTCAAGCGGGAATCAAGGCACATGTTTTGATTAC
TGCTCGTGTAGCCCGGAATACGACGAGGAAGGGGAGGATAGGTCAGACTC
AGAGGCGGAGGAAGACTACCAAGAGGAGGGCAGGGCAATACAGGCTGGGG
TTAGTCCTCCTCGTATCAAAGCACCTGAGGTGGCGCGTCTCCGTTTCATT
TGCATGGGTCAAGGCCTGCTCCGAGATACGTGTACATTACAAGAATGTCG
CATTCCTTGTTTCGACACCCACCCCACGCCTGTCAACGTCTCCATCCGAC
CCGCCCCGCCGCGTCCTCCTCGACATGGAGATAGAGGGCATGGACAAAAA
AAGAAAAAGAAAACACTTGGTGAAGACGTGGGGGGACTTGATGGGACACG
GGGTTCGTCTTTGCCGACAGCATGTGTGTCTTGCAGTATCATGTAAAAAA
CAAGGGGGTTCGACACACATGACGGGATAAGACTGGAGGGGGAGGGGGCC
TGCTTGGAGAGGTCCTTCGCGGGATTGACTGATCATATGAGCTGGCGCTT
ACGTGCTATCACCGAGCACATTGGAGACGCCTTTGAAACCTGAAATCAAA
TTTGTACAAGCCTGGCACCGTCATCTCAATTTATACGCCAGTCTTGAAAT
CTGACAGTCACTCGTTTGAAATCTTGTAGCTCTCTACGGAAACTACAGAC
TCCATGTTGTTAGTTCATGCGTGGAATATCAAACAATCTATGTCGTGAAT
TTCAGACCACACGTGAGATAGAGAACCCTCGGGCGGATGAGATACACAGC
ATCTTTTCCTTCCACTCGACGGGTAAGCAACCTCCCTGCAAAAAATTATC
GACATGAATAAGATCTTGCGATTTGCTTGCTTTCTTAGTTTAAAATGGCT
GTCCCTTTGTCATTGTTTGCGTTTTAAGTTACTCTGGACATCACTTATGC
AAGAGGTGGGGAGGTTACATTTTCCACCTGTGTATCCCGCCCGGTATCAG
CCCCGTCCAAATGTCGCGCTCTGCGGGAAGAAGTGAGTGTACGGCAGTTT
CAAAGGATAGTGTTCATCCGCATGTACATCGATCCTTCTTGATGGGGAAC
AAGCACGTTCAGCACCGATCACTAAGAAAGGACCACGCCGCACGACAAAT
GAATGCGGAAGTCCTCTTCTTTCAAATTTAATAATCTGCACATAATGAAA
ATGATTACAACTGAGAGGAATGTAAAGATCTATAGGAGATCGGGCATAAG
CCACCTCTTGAGCAATTTAATTTGACCAACGCGAACAAAAGAAATAGGAT
GGCGTCTCTCAAACCGATGTAGTAGTCGACGAATTTTTTACTGCACACTG
TTTGTTACTTTGTGAGCGCTTTCCACTTTGATAATTGTGTCTGGAATGAT
GCAAATAAAGATTTACTGACCTTTACGCGAACTTCTTTCAAAATATCACT
TTGGCAGGACGCGTGTCACGACGGAATACAACAAAAGGGAGGCCGCGATG
CGTCGGTCCCCCAACGGTACGGCCCACGCATCGAAGGAGAATAATTGATC
TGAAAACAGCTACCAACATCTCAGGATGAGAAAAGTGGAAGCATATGGCT
TTGCGGGGTGGATTGGCACATTTGTGGTTTCTGGGCTCTTTCTCATGTGG
GTTTACATTCCGGAGGCCTGGCTTCATGCAATGGGCGTCACCTATTACCC
GCACAAGGAGTGGGCCCTCTCATTACCAGCTTTCCTGTGCGTCTCCTACG
CGCTCTCCAGCATTGTGTACGTGGCATTGAATCTAATGAGTACGCCGCCG
CTGCATTCATACGAGACGATCACAGACCGATGGGCTCGAAGGCCGCAGAC
ATGCCTCAATAGTGAGGTGCCAGGGCGAAGTGATTCACCTTCAGTGCCGT
ATTTCGCCGATTTGGACATTGGGGTTGTGAATCAGTATATGTACACAGAC
GAGTGTTGCGAAGTGATCAACGCGGACAATTGAAAAGGCGAAATTTGGCC
AGATGTTGGTGTGTGAATGCAGATGTACGGGTACAGCCCATCTGGCGATA
TTCACGAATATGCGCAGATATGAATGAGGTCCCTGGACCAAGCATCTGAC
GGAGATAAAGAAAGAATTTCTGTGCATCGAACGTACC back to topprotein sequence of rna470 >rna470-protein ID=rna470-protein|Name=rna470|organism=Nannochloropsis gaditana|type=polypeptide|length=233bp
MTVDLQNMTVPEDVMAELGAKIAQHPTLSHHSSPAVLSRMLLARHLHVDD
AYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILR
TRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFR
NLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDE
RTKHKVHVLKDEAALLEYFHPQDLPSDFAHLAK back to topmRNA from alignment at CM002455.1:1174294..1177055- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna470 ID=rna470|Name=rna470|organism=Nannochloropsis gaditana|type=mRNA|length=2762bp|location=Sequence derived from alignment at CM002455.1:1174294..1177055- (Nannochloropsis gaditana)
AACACGAGCACGAGCACGAGCCCTGGGTGACCTGGTTGCGACTAGATTGT
GTCTATAATTTTTCCCTGCGAAACGGGGTATTCTTCCAGATAAAGAGCGT
CTTTTAAATTTCAATCAGCGTGGCAAAGATCAAGATACTTGCAGCTACGC
TGTATGGTATTTTTGCATTGTAAAACCTGCGCTTTTTCACATCAAATGCC
TGTTCCCCAATTCAGACAGGACTGTTGACCGTGCAAGACAAGTAAGAATA
AAGAGCTGCGACACAACGAAAGGAAAGGATGACTGTCGATTTGCAAAACA
TGACCGTCCCTGAGGACGTTATGGCGGAACTAGGAGCCAAGATCGCGCAA
CACCCTACCCTAAGCCACCATTCTTCTCCCGCCGTGCTCTCCCGAATGCT
ACTCGCAAGGCACTTGCATGTAGATGACGCCTATGTGCTATGGGAAGGAT
GGGCCGCCTGGCGCGAGGATGAGAAACCAGAATTGATCGACGAAGCAAGC
GTCGCCCCTCAGCTTGCGGTACAGACCGTCTCCGTCACCGGAATGGACAA
GAGCGGACGCACATGCGTCATTTTACGCACACGCAACCATGTTCCAGGCC
AGTTTCCTTTCGAGGATATGTTGCGTTTGACGATATGGGTACTGGAGACA
TCTACCTCCCGGTCCGTGAAGACCTCGGGGACTGGCTACATTACCGCCAT
ATGGGACTGTAAAGGGCAAGGTTTCCGCAATTTAGACACCGCGTTAGCCA
CACACAAGCCGGGTATAATTCATATCATGAAGGTAGGTGGGCCAAGAATG
GGTACGGAGCGCTTGCACGTGCCTTGCGCGTATGCGTCCCCCAAGATGAG
CGTAGCTCACATTCCTACCTCCTGCTGCCTGTGCCCTTCCCTCACCCCCG
ACCCTCGCCGGTCCACCCTTAATTCCTGGGCAGGAGTACTATCCAGAGTG
CTTGCAGACCCTTCTCATCGTCAACAGCAACTGGGTCTTCCGGGTGTTTT
GGACGGTCATTTACCCCTTCATCGACGAGCGGACTAAGCACAAGGTGCAC
GTGCTCAAGGACGAAGCGGCCCTCCTCGAGTACTTCCACCCGCAGGACCT
CCCATCGGACTTCGCCCACCTGGCCAAGTAGGATGTATCGCGGGAGAGCG
ACGGGAAGGATTTTGGCGCGGATCGTGGGGTAGGGCGTGGAAGGGAAGGA
CAAAGAGCCCAGACAGCGAGGACGGGGTAAGGAACGGAGGGTTGAGAGGG
TGGCGGCGGAGTGACGTGACTGCTGAGGGAAGACTCACAAACATTTAAAT
GAGCGTGTGCTCGAAATTATCTTTGTATGTAAATGACGCGGGGGCGCCGG
GGGAATGTGGCGCTGTCACTGCTGTCCATTTCGCGAGCGTAAGAAAAGCG
AAAACTCTAGATGGCAGACATAGCACCATTGGTAAAGGATGGGGCAAAGA
GGGTTAGGCATGTAAGAAAGCGCGAAGGTCGCGGAAGGGGGGGAAGACAA
AGGCCCTCCAAATGAGGCAATGGGCAATGGATCTGCGGGCGTGGTTAAGG
AAGGACGGCGACAAGGGGAGTCGTGGACGTCTCGGGGAGCTGAGAGGAGG
TGACTTGATAATCGGAGGAGAGAAAGGCGCGCGACTGGTGAAAGGCTTGC
GCAGGAAGAAAAAACGGAGAAGGAAGAGGTAAACGGGTTTGGAAGTGTGG
ATGTACATTTCTGGTGCATTGAAGTTCGGACAGTACTTCGATGGTGAAGT
GAAATCGGGCGACGGCAATCGTGCGTCTCGTTTTTTGCGTTCAAAGGTAC
GTTCGATGCACAGAAATTCTTTCTTTATCTCCGTCAGATGCTTGGTCCAG
GGACCTCATTCATATCTGCGCATATTCGTGAATATCGCCAGATGGGCTGT
ACCCGTACATCTGCATTCACACACCAACATCTGGCCAAATTTCGCCTTTT
CAATTGTCCGCGTTGATCACTTCGCAACACTCGTCTGTGTACATATACTG
ATTCACAACCCCAATGTCCAAATCGGCGAAATACGGCACTGAAGGTGAAT
CACTTCGCCCTGGCACCTCACTATTGAGGCATGTCTGCGGCCTTCGAGCC
CATCGGTCTGTGATCGTCTCGTATGAATGCAGCGGCGGCGTACTCATTAG
ATTCAATGCCACGTACACAATGCTGGAGAGCGCGTAGGAGACGCACAGGA
AAGCTGGTAATGAGAGGGCCCACTCCTTGTGCGGGTAATAGGTGACGCCC
ATTGCATGAAGCCAGGCCTCCGGAATGTAAACCCACATGAGAAAGAGCCC
TGTTCATGTGCATGGACAAAGATGTTGGCCCAAACGTCAAAAATAACGCT
GCAGATAACTATGGGGACCTGACCCCAGGCAACGGGGTGTGTGATCTAGG
CAGGAAGGGAGATGCAGGTCGATAACGCGAAAAAATGTCATCAAGACGTA
CCAGAAACCACAAATGTGCCAATCCACCCCGCAAAGCCATATGCTTCCAC
TTTTCTCATCCTGAGATGTTGGTAGCTGTTTTCAGATCAATTATTCTCCT
TCGATGCGTGGGCCGTACCGTTGGGGGACCGACGCATCGCGGCCTCCCTT
TTGTTGTATTCCGTCGTGACACGCGTCCTGCCAAAGTGATATTTTGAAAG
AAGTTCGCGTAAAGGTCAGTAAATCTTTATTTGCATCATTCCAGACACAA
TTATCAAAGTGGAAAGCGCTCACAAAGTAACAAACAGTGTGCAGTAAAAA
ATTCGTCGACTA back to topCoding sequence (CDS) from alignment at CM002455.1:1174294..1177055- >rna470 ID=rna470|Name=rna470|organism=Nannochloropsis gaditana|type=CDS|length=1404bp|location=Sequence derived from alignment at CM002455.1:1174294..1177055- (Nannochloropsis gaditana)
GAGTACTATCCAGAGTGCTTGCAGACCCTTCTCATCGTCAACAGCAACTG
GGTCTTCCGGGTGTTTTGGACGGTCATTTACCCCTTCATCGACGAGCGGA
CTAAGCACAAGGTGCACGTGCTCAAGGACGAAGCGGCCCTCCTCGAGTAC
TTCCACCCGCAGGACCTCCCATCGGACTTCGCCCACCTGGCCAAGTAGAT
GACTGTCGATTTGCAAAACATGACCGTCCCTGAGGACGTTATGGCGGAAC
TAGGAGCCAAGATCGCGCAACACCCTACCCTAAGCCACCATTCTTCTCCC
GCCGTGCTCTCCCGAATGCTACTCGCAAGGCACTTGCATGTAGATGACGC
CTATGTGCTATGGGAAGGATGGGCCGCCTGGCGCGAGGATGAGAAACCAG
AATTGATCGACGAAGCAAGCGTCGCCCCTCAGCTTGCGGTACAGACCGTC
TCCGTCACCGGAATGGACAAGAGCGGACGCACATGCGTCATTTTACGCAC
ACGCAACCATGTTCCAGGCCAGTTTCCTTTCGAGGATATGTTGCGTTTGA
CGATATGGGTACTGGAGACATCTACCTCCCGGTCCGTGAAGACCTCGGGG
ACTGGCTACATTACCGCCATATGGGACTGTAAAGGGCAAGGTTTCCGCAA
TTTAGACACCGCGTTAGCCACACACAAGCCGGGTATAATTCATATCATGA
AGGAGTACTATCCAGAGTGCTTGCAGACCCTTCTCATCGTCAACAGCAAC
TGGGTCTTCCGGGTGTTTTGGACGGTCATTTACCCCTTCATCGACGAGCG
GACTAAGCACAAGGTGCACGTGCTCAAGGACGAAGCGGCCCTCCTCGAGT
ACTTCCACCCGCAGGACCTCCCATCGGACTTCGCCCACCTGGCCAAGTAG
ATGACTGTCGATTTGCAAAACATGACCGTCCCTGAGGACGTTATGGCGGA
ACTAGGAGCCAAGATCGCGCAACACCCTACCCTAAGCCACCATTCTTCTC
CCGCCGTGCTCTCCCGAATGCTACTCGCAAGGCACTTGCATGTAGATGAC
GCCTATGTGCTATGGGAAGGATGGGCCGCCTGGCGCGAGGATGAGAAACC
AGAATTGATCGACGAAGCAAGCGTCGCCCCTCAGCTTGCGGTACAGACCG
TCTCCGTCACCGGAATGGACAAGAGCGGACGCACATGCGTCATTTTACGC
ACACGCAACCATGTTCCAGGCCAGTTTCCTTTCGAGGATATGTTGCGTTT
GACGATATGGGTACTGGAGACATCTACCTCCCGGTCCGTGAAGACCTCGG
GGACTGGCTACATTACCGCCATATGGGACTGTAAAGGGCAAGGTTTCCGC
AATTTAGACACCGCGTTAGCCACACACAAGCCGGGTATAATTCATATCAT
GAAG back to top
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