EWM30222.1, cds470 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30222.1 vs. NCBI_GenBank
Match: gi|585112881|gb|EWM30222.1| (cral trio domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 486.878 bits (1252), Expect = 2.880e-174 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query: 1 MTVDLQNMTVPEDVMAELGAKIAQHPTLSHHSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDLPSDFAHLAK 233
MTVDLQNMTVPEDVMAELGAKIAQHPTLSHHSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDLPSDFAHLAK
Sbjct: 1 MTVDLQNMTVPEDVMAELGAKIAQHPTLSHHSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDLPSDFAHLAK 233
BLAST of EWM30222.1 vs. NCBI_GenBank
Match: gi|585109977|gb|EWM27704.1| (CRAL-TRIO domain protein [Nannochloropsis gaditana]) HSP 1 Score: 152.91 bits (385), Expect = 4.264e-41 Identity = 75/197 (38.07%), Postives = 121/197 (61.42%), Query Frame = 0
Query: 14 VMAELGAKI---AQHPTLSHHSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVH 207
+ EL AKI A + ++ +L+R+L+AR+L V +A+ +W AWR+ +P+++ E AP L+ VS+ G DK GR C+ RNH+ + LR + +LE +T S +T+ G+I I D +G G +N+DT L KPG++ I++EYYPE L + I++++W+FR+ W +I PF+DE+T+ KVH
Sbjct: 111 IFEELLAKITELAPEDNVPPYNDEDLLNRVLVARNLQVPEAFRMWMNIVAWRKHYQPQILSEEEAAPYLSKGVVSICGPDKQGRPCIYALNRNHIIDAENHDSNLRTIVNLLEKTTVESTRTAD-GFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKVH 306
BLAST of EWM30222.1 vs. NCBI_GenBank
Match: gi|118360174|ref|XP_001013324.1| (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >gi|89295091|gb|EAR93079.1| divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210]) HSP 1 Score: 126.331 bits (316), Expect = 4.675e-31 Identity = 62/186 (33.33%), Postives = 104/186 (55.91%), Query Frame = 0
Query: 39 RMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDL 224
R+L AR V+ A+ +W+ W WR D K + I E VA +L GMDK G C++++ + H PG + +LR +++LE S+ + +GTG ++ IWD +G +N D+ L + + IM++ Y E L T+ I++ NW F+ + V+ PF+ RTK K+ ++ L ++F P +L
Sbjct: 59 RLLWAREFKVEKAFEMWKKWVDWRIDFKADEIKEEDVASELQSGKAFWHGMDKQGNPCLVVKVKYHRPGVSSQDVVLRYFLYLLEEGISK-CEQAGTGKVSVIWDREGFDKKNFDSNLFSTFKKLNQIMQDNYAERLSTIYILHPNWFFKTIYAVVKPFLTSRTKSKITIVDKTEELKKFFEPSEL 243
BLAST of EWM30222.1 vs. NCBI_GenBank
Match: gi|1134868678|gb|OMJ67334.1| (hypothetical protein SteCoe_35521 [Stentor coeruleus]) HSP 1 Score: 118.627 bits (296), Expect = 4.736e-29 Identity = 58/199 (29.15%), Postives = 105/199 (52.76%), Query Frame = 0
Query: 31 HSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDLPSDFA 229
+++ +L R+L AR L V AY +W+ W WR+D + + I E + + G D GR C+I+R R H P QF E+ +R I+++E + TG I I+D N D L + +++++Y E L + I++ NW++ + + I P ++++T++K+H+L++ L E+FHP L ++
Sbjct: 31 YTNQDMLLRVLRARDLKVQAAYEMWQKWYKWRKDYRADEITEEEMKEHIKTGKAFFFGEDNEGRPCLIVRARYHWPNQFSLEETMRYVIYLVEQGV-KLADERHTGQICVIYDRGDISSANKDGNLIELGKSLAAMLQDFYAERLGAVYILHVNWLYWLIFQAIKPLLNKKTRNKMHILRNAEGLKEHFHPSQLMVEYG 228
BLAST of EWM30222.1 vs. NCBI_GenBank
Match: gi|829171967|ref|XP_012653198.1| (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >gi|586737512|gb|EWS74225.1| divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210]) HSP 1 Score: 119.013 bits (297), Expect = 1.151e-28 Identity = 62/227 (27.31%), Postives = 112/227 (49.34%), Query Frame = 0
Query: 15 MAELGAKIAQ-----HPTLSH-----HSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELID--EASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDLPSDFA 229
+AE KI + HP +S +SS R + AR ++ +WE W W ++ +P+LI E+++ QL+ + D R C+ R + HVP E+ +R +++LE +K G I I+D +G + D ++ I+++YYPE L ++ +NW +R + V+ F+ E+T KV VL +++ LL++F+ Q+L ++
Sbjct: 22 IAEFQKKIEKQINQTHPNISQELKELYSSVDTAIRFMNAREFSEQKSFEMWEKWIKWHQEYRPDLISDKESTIQKQLSTGKLFWHKFDNERRPCLYYRMKYHVPKLASVEESVRFFLFMLEQGIKEGIKLGSEGTICVIYDRRGYTKKQYDENAMKTMRALVPILQDYYPERLSMFYVLGANWFYRAAFKVVATFMSEKTSKKVKVLGEDSELLQFFNKQNLIKEYG 248
BLAST of EWM30222.1 vs. NCBI_GenBank
Match: gi|1134886566|gb|OMJ83991.1| (hypothetical protein SteCoe_14977 [Stentor coeruleus]) HSP 1 Score: 117.087 bits (292), Expect = 1.849e-28 Identity = 59/215 (27.44%), Postives = 111/215 (51.63%), Query Frame = 0
Query: 15 MAELGAKIAQHPTLSHHSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDLPSDFA 229
+ EL I + +++ +L R+L AR L V AY +W+ W WR+D + + I E + + G D GR C+I+R R H P QF E+ +R I+++E + TG + I+D N D L G+ +++++Y E L + I++ NW++ + + + P ++++T++K+H+L++ L E+F+P L ++
Sbjct: 15 LCELTKLIHEITDEEKYTNQDMLIRVLRARDLKVQPAYEMWQKWYRWRKDYRADEITEEEMKEHIKTGKAFFFGEDNEGRPCLIVRARYHWPNQFALEETMRYVIYLVEQGV-KLADEKHTGQMCVIYDRGDISSANKDGNLIELGKGLAAMLQDFYAERLGAVYILHVNWLYWLIFQAVKPLLNKKTRNKIHILRNVEGLKEHFNPSQLLVEYG 228
BLAST of EWM30222.1 vs. NCBI_GenBank
Match: gi|145493659|ref|XP_001432825.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124399939|emb|CAK65428.1| unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 114.39 bits (285), Expect = 2.517e-27 Identity = 52/192 (27.08%), Postives = 111/192 (57.81%), Query Frame = 0
Query: 28 LSHHSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYF 219
+ +S+ L R+L+AR ++DA+ W+ W WR+ + + I + ++ ++ G+DK G C+I++ + H PG+ E ++R +++++ ++ +GTG I+ IWD +G F+N D+++ T I+ ++++ Y E L L I+ N++ + ++ PF++E+TK K+ +L ++ L+Y+
Sbjct: 31 IQKYSNEDHLVRLLIAREWKINDAFEQWKRWVEWRKQYRADEIKIEEIQKEIDLRKAFWNGVDKLGNPCLIIKAKRHFPGESNPETLIRFFLYMIDQGIQQA-DMTGTGRISVIWDREGVAFKNFDSSMFTIMKKIVTLVQDNYAERLHQLFILYPNFLVKSVMNIVRPFLNEKTKSKI-ILCNQMKDLQYY 220
BLAST of EWM30222.1 vs. NCBI_GenBank
Match: gi|145473547|ref|XP_001462437.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124430277|emb|CAK95064.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 113.62 bits (283), Expect = 5.419e-27 Identity = 58/209 (27.75%), Postives = 109/209 (52.15%), Query Frame = 0
Query: 19 GAKIAQHPTLSHHSSPAVLSRMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDLPSD 227
K+ + + ++ A L R+L+A+ +D+A+ W W WR+ K + I + +L + G DK G C+I++ R H PGQ + ++R +++++ R+ + GTG IT IWD +G +N D+++ +I ++++ Y E L I+ N++++ T++ PF+ ERTK K+ + + L YF + SD
Sbjct: 27 AQKLLRDDLIQKYTDQAHLLRLLIAKDWKLDEAWEQWNRWVEWRKQYKADDIKIEEIKKELDMNKTFWNGQDKLGNPCLIIKARRHFPGQSDPDTLIRYMLYMIDIGIERA-EQGGTGKITVIWDREGVTTKNFDSSMFKIIKRMITLVQDNYAERLHQAYILYPNFLYKTVMTIVKPFLSERTKQKIILCNEFKDLYPYFGENFIISD 234
BLAST of EWM30222.1 vs. NCBI_GenBank
Match: gi|118399667|ref|XP_001032158.1| (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >gi|89286496|gb|EAR84495.1| divergent CRAL/TRIO domain protein (macronuclear) [Tetrahymena thermophila SB210]) HSP 1 Score: 113.62 bits (283), Expect = 1.642e-26 Identity = 55/186 (29.57%), Postives = 101/186 (54.30%), Query Frame = 0
Query: 39 RMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTGMDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDL 224
R+L A+ HV+ A+ +W+ W +WR + I E +A + G DK C++++ +NH+PG + M++ ++++E + +S + +GTG I+ IWD +G +N+D L + I+++ Y E +Q + I+ NW F+ + ++ PF+ ERTK KV + + YF P +L
Sbjct: 65 RLLWAQDFHVEKAFAMWQKWISWRLKIGADDIKEEDIAQEYQRGRAFWHGKDKQNNPCLVVKVKNHIPG-VSSDIMVKYVLFLIEEAIQKS-EEAGTGMISIIWDREGFSIKNVDYKLFETFKSLNQIIQDNYAERIQKVYILYPNWFFKTIYALVKPFLTERTKQKVLFVDQIEDMTTYFEPSEL 248
BLAST of EWM30222.1 vs. NCBI_GenBank
Match: gi|118400186|ref|XP_001032416.1| (divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210] >gi|89286757|gb|EAR84753.1| divergent CRAL/TRIO domain protein [Tetrahymena thermophila SB210]) HSP 1 Score: 111.694 bits (278), Expect = 4.965e-26 Identity = 56/192 (29.17%), Postives = 98/192 (51.04%), Query Frame = 0
Query: 39 RMLLARHLHVDDAYVLWEGWAAWREDEKPELIDEASVAPQLAVQTVSVTG-MDKSGRTCVILRTRNHVPGQFPFEDMLRLTIWVLETSTSRSVKTSGTGYITAIWDCKGQGFRNLDTALATHKPGIIHIMKEYYPECLQTLLIVNSNWVFRVFWTVIYPFIDERTKHKVHVLKDEAALLEYFHPQDLPSDFA 229
R+LLAR + +W+ W WRE KPE I E + +L +TG D ++ R H+PG P E + I LE + ++ +T G+G +T D G +N T + ++ I+++ YPE L L++ W+F+ + ++ PF+ +RTK K+ +LK E +L+Y ++L +++
Sbjct: 56 RILLARDFDPKKSLEMWKNWVQWREQNKPETIKEQDIVEELKAGKAFLTGGYDIQKNPILVAVFRRHIPGAIPRETTEKFFIHYLEDALKKARQT-GSGRVTIFADMVGYSNKNFSTKDSDLIKKLLSILQDNYPESLGKLIVFKPTWLFKFVYAIVKPFLSKRTKEKIVLLKKEEEILKYISKEELLAEYG 246 The following BLAST results are available for this feature:
BLAST of EWM30222.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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