|
|
Properties
| Property Name | Value |
|---|
| Product | endo-beta- -glucanase |
| Orig transcript id | gnl|cribi|Naga_100897g4.3246.mrna |
| Orig protein id | gnl|cribi|Naga_100897g4.3246 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:66321..68688 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4690 ID=rna4690|Name=rna4690|organism=Nannochloropsis gaditana|type=mRNA|length=213bp
ATGTTGCCGATCTCCATTGAATTATATCGTCAACCCGAGCTTCAGGGATT
CTTGGAGGATATGTGTCTATTAAGGTTGGAGATAAAATCCATTTCGGGCC
GGTCGGATTGGAAAAAAGGCTGTGCTGTCTACCTGATCTATACTCGCACA
ACTCTTGGTCACATGTCAGTCGTTGCGCCATTGACTTCCTTTTTGTGGTA
TTTGGGCTTCTAG back to topprotein sequence of rna4690 >rna4690-protein ID=rna4690-protein|Name=rna4690|organism=Nannochloropsis gaditana|type=polypeptide|length=396bp
IPLDCGRGRSLPVGPSRDHQLSSPLLQSHLPQPGLPASHEYRKRHGCGCD
CLSKPRSSLRSHAFAARGGTLCIRRHVSRGLDSKRDNPRRKFLQRRWPLL
GRACLCRRLVAQGTAAVRFPYCLFFPFFLLPQADVLSFESSAPLLFWPPL
SPVRAHGQDMLYEFIFTQISPSLPPILAFIQATGKKEYLDKAIATFYQCC
YVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFMNKIPR
TPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLG
DCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDFPHILWGGLLG
GPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLRGIRY back to topmRNA from alignment at CM002464.1:66321..68688- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4690 ID=rna4690|Name=rna4690|organism=Nannochloropsis gaditana|type=mRNA|length=2368bp|location=Sequence derived from alignment at CM002464.1:66321..68688- (Nannochloropsis gaditana)
ATCCCGTTAGATTGCGGACGAGGTAGATCATTGCCGGTGGGGCCCTCCCG
AGACCATCAACTATCTTCGCCGCTCCTACAAAGTCACCTGCCTCAACCCG
GGCTCCCAGCCAGGTACACGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAG
GGAGGACTCTCGGGGTGTCTTGGTGACTCAGAGCCAGTACGCCCCCTTGT
CATGCTTCAAGTCCGTCAGAAACAGCCGCCTTTGGAGCCAAGTCCTCTTT
TCCTCCTTCCTCCTTCCCTCCTTTCCCACCTCAGTCATGAATACCGCAAG
CGCCATGGCTGCGGGTGCGATTGCCTTTCGAAACCACGATCCAGCCTACG
CAGCCACGCTTTTGCAGCACGCGGAGGAACTCTTTGCATTCGCCGACATG
TGTCCCGGGGATTGGATTCGAAACGGGACAATCCCCGCCGGAAATTTCTA
CAACGACGGTGGCCGCTACTTGGACGAGCATGCCTTTGCCGCCGCCTGGT
TGCACAAGGTACCGCCGCTGTTCGTTTTCCATACTGTCTCTTTTTTCCTT
TTTTTCTACTACCTCAAGCTGACGTTCTCTCATTCGAGTCAAGCGCTCCT
CTACTTTTCTGGCCTCCTCTCTCCCCTGTTCGTGCGCACGGCCAAGACAT
GCTTTATGAGTTTATCTTCACCCAAATCTCTCCCTCACTCCCTCCAATTC
TCGCTTTCATTCAGGCAACAGGCAAAAAAGAATACTTGGACAAGGCGATC
GCCACCTTTTACCAATGCTGCTACGTTCCCGGCGGCTATCAAGTGAGCGT
GCTCGACTGGGCGGACATGACTATGGGAATCAACCTTCTTCTGTACGAGG
TAGGGAGGGAGGAAACGAGTTGAGGGGGAACGGGACGAAGGGATGAATTA
AGCGGGGGAAATGGTGCGCGAATGGAGGAGATGAAATGGCTGGCGGCTTT
CTCGGTCGTTCAACCCCCCCCTCTTGCTCCGTCGTTCAACCCTTCCCCCA
TTGCTTGACAAAATGTTCTTTGGGTACTCTACTGGTGATGGTATCATCTC
ATTCTCCAATATTTATTGTTTCCTCCCCCCCCCGCCACGCTCTACTCTTA
TCCCCTATGCGATATGGTTTTAATAAGTTCTCTACCTTGCATTTCTCCTC
CTCTCAGGCCACGCAATGGAACGACTTCAAGGACGCGGTGATCAACCGCC
AAAAGGCGTTTATGAACAAAATCCCGCGAACGCCCAAAGGCCTGAGCTAC
TACAACGAATGGTGGGGCAGGACGTTAAGGGAGGGGACGACCGCTCTGGT
CTCTGAAGCCTCTCGAAAGGACCGTGCTTGAGTTTTTTCTGTTTTTGTTC
GTTCGGGCTCACTCTTTTTCGCTTCATTTCGGATTTTGTAGGGGGCCTAA
TCGTTATGCTGCCAACGCTGCCTTCACGGCCCTGGTGGCGGCCGAATTTG
GCTTCGAGGTGGATTACTTTCGCTCTTATGCCGCTTCGCAGATCAATTAC
ATGCTAGGTATGCGACTGTCCATGAGCTTGAAGGCCTACACGCGGACCTC
CGCCGCCTCCCTTTGTCCTGTCCCTGTCTCTCTCGACGTCTTCCCGACGT
GGGCGTGTTTGAGGGTCGTCGATCACGATCCCTTGGCCTCCGGGCGCTTG
GAACGTCTCGTCTTTTCCCACCCTTTTGAAGTAAATCGGGGTTGTCGTCC
CCCGACCGACCTGAGCAAAGGATGCCTGCTTGCCTTCGTTTTCCGTCTCT
GACGCCCGTATCTTTCCCACCCAGGTGATTGCTGCGATGGCAAAAAATCG
TTTCTTATCGGTTTTGGGCCCTCTTGGCCCAATTCATACCATCATCGGGC
AGCGTCGTGCAAGGGTACCGACTGCCGTTGCACCCAGCAAGACTTTCCCC
ACATCTTATGGGGGGGATTGCTGGGTGGGCCGGAAAAGGATGACACAATT
TCGGACGAAGGCTGCCCAGATTTCATCCACATGGAAGTCGCCTTGGATTT
CTCAGCAGGATTCACGACTGCAGTGGCTGGATTAAAGCATTTGAGCCTGA
GAGGTATTCGGTATTAAGAGTAAAGACTTCAAGGCCTCGACATTATTGAT
AAGGACGGTATTAGGCACGGAAAATTTGTGCAGTTGTGAAAACGTACATC
TAAAGACTGGGTGAAGCCAAGGATGATAAATAGTGTGAAGGTACATGCGT
GTAGGATGTCACATGGATATGGAAATCAGGAATGTAGGGCTGTTGACTTT
GCTTCAGTCAGCCATGTCCGCTGATCAGACACGTTTTCATAGGTTTATAT
TTCGATGGTCGTTAAAGAACAAGTCGAAGACCTCGATAAGAAATTCAACT
TTTGGTGTGACTATTTTG back to topCoding sequence (CDS) from alignment at CM002464.1:66321..68688- >rna4690 ID=rna4690|Name=rna4690|organism=Nannochloropsis gaditana|type=CDS|length=5955bp|location=Sequence derived from alignment at CM002464.1:66321..68688- (Nannochloropsis gaditana)
GTGATTGCTGCGATGGCAAAAAATCGTTTCTTATCGGTTTTGGGCCCTCT
TGGCCCAATTCATACCATCATCGGGCAGCGTCGTGCAAGGGTACCGACTG
CCGTTGCACCCAGCAAGACTTTCCCCACATCTTATGGGGGGGATTGCTGG
GTGGGCCGGAAAAGGATGACACAATTTCGGACGAAGGCTGCCCAGATTTC
ATCCACATGGAAGTCGCCTTGGATTTCTCAGCAGGATTCACGACTGCAGT
GGCTGGATTAAAGCATTTGAGCCTGAGAGGTATTCGGTATTAAGGGGCCT
AATCGTTATGCTGCCAACGCTGCCTTCACGGCCCTGGTGGCGGCCGAATT
TGGCTTCGAGGTGGATTACTTTCGCTCTTATGCCGCTTCGCAGATCAATT
ACATGCTAGGCCACGCAATGGAACGACTTCAAGGACGCGGTGATCAACCG
CCAAAAGGCGTTTATGAACAAAATCCCGCGAACGCCCAAAGGCCTGAGCT
ACTACAACGAATGTCATGAATACCGCAAGCGCCATGGCTGCGGGTGCGAT
TGCCTTTCGAAACCACGATCCAGCCTACGCAGCCACGCTTTTGCAGCACG
CGGAGGAACTCTTTGCATTCGCCGACATGTGTCCCGGGGATTGGATTCGA
AACGGGACAATCCCCGCCGGAAATTTCTACAACGACGGTGGCCGCTACTT
GGACGAGCATGCCTTTGCCGCCGCCTGGTTGCACAAGGTACCGCCGCTGT
TCGTTTTCCATACTGTCTCTTTTTTCCTTTTTTTCTACTACCTCAAGCTG
ACGTTCTCTCATTCGAGTCAAGCGCTCCTCTACTTTTCTGGCCTCCTCTC
TCCCCTGTTCGTGCGCACGGCCAAGACATGCTTTATGAGTTTATCTTCAC
CCAAATCTCTCCCTCACTCCCTCCAATTCTCGCTTTCATTCAGGCAACAG
GCAAAAAAGAATACTTGGACAAGGCGATCGCCACCTTTTACCAATGCTGC
TACGTTCCCGGCGGCTATCAAGTGAGCGTGCTCGACTGGGCGGACATGAC
TATGGGAATCAACCTTCTTCTGTACGAGATCCCGTTAGATTGCGGACGAG
GTAGATCATTGCCGGTGGGGCCCTCCCGAGACCATCAACTATCTTCGCCG
CTCCTACAAAGTCACCTGCCTCAACCCGGGCTCCCAGCCAGGTGATTGCT
GCGATGGCAAAAAATCGTTTCTTATCGGTTTTGGGCCCTCTTGGCCCAAT
TCATACCATCATCGGGCAGCGTCGTGCAAGGGTACCGACTGCCGTTGCAC
CCAGCAAGACTTTCCCCACATCTTATGGGGGGGATTGCTGGGTGGGCCGG
AAAAGGATGACACAATTTCGGACGAAGGCTGCCCAGATTTCATCCACATG
GAAGTCGCCTTGGATTTCTCAGCAGGATTCACGACTGCAGTGGCTGGATT
AAAGCATTTGAGCCTGAGAGGTATTCGGTATTAAGGGGCCTAATCGTTAT
GCTGCCAACGCTGCCTTCACGGCCCTGGTGGCGGCCGAATTTGGCTTCGA
GGTGGATTACTTTCGCTCTTATGCCGCTTCGCAGATCAATTACATGCTAG
GCCACGCAATGGAACGACTTCAAGGACGCGGTGATCAACCGCCAAAAGGC
GTTTATGAACAAAATCCCGCGAACGCCCAAAGGCCTGAGCTACTACAACG
AATGTCATGAATACCGCAAGCGCCATGGCTGCGGGTGCGATTGCCTTTCG
AAACCACGATCCAGCCTACGCAGCCACGCTTTTGCAGCACGCGGAGGAAC
TCTTTGCATTCGCCGACATGTGTCCCGGGGATTGGATTCGAAACGGGACA
ATCCCCGCCGGAAATTTCTACAACGACGGTGGCCGCTACTTGGACGAGCA
TGCCTTTGCCGCCGCCTGGTTGCACAAGGTACCGCCGCTGTTCGTTTTCC
ATACTGTCTCTTTTTTCCTTTTTTTCTACTACCTCAAGCTGACGTTCTCT
CATTCGAGTCAAGCGCTCCTCTACTTTTCTGGCCTCCTCTCTCCCCTGTT
CGTGCGCACGGCCAAGACATGCTTTATGAGTTTATCTTCACCCAAATCTC
TCCCTCACTCCCTCCAATTCTCGCTTTCATTCAGGCAACAGGCAAAAAAG
AATACTTGGACAAGGCGATCGCCACCTTTTACCAATGCTGCTACGTTCCC
GGCGGCTATCAAGTGAGCGTGCTCGACTGGGCGGACATGACTATGGGAAT
CAACCTTCTTCTGTACGAGATCCCGTTAGATTGCGGACGAGGTAGATCAT
TGCCGGTGGGGCCCTCCCGAGACCATCAACTATCTTCGCCGCTCCTACAA
AGTCACCTGCCTCAACCCGGGCTCCCAGCCAGGTGATTGCTGCGATGGCA
AAAAATCGTTTCTTATCGGTTTTGGGCCCTCTTGGCCCAATTCATACCAT
CATCGGGCAGCGTCGTGCAAGGGTACCGACTGCCGTTGCACCCAGCAAGA
CTTTCCCCACATCTTATGGGGGGGATTGCTGGGTGGGCCGGAAAAGGATG
ACACAATTTCGGACGAAGGCTGCCCAGATTTCATCCACATGGAAGTCGCC
TTGGATTTCTCAGCAGGATTCACGACTGCAGTGGCTGGATTAAAGCATTT
GAGCCTGAGAGGTATTCGGTATTAAGGGGCCTAATCGTTATGCTGCCAAC
GCTGCCTTCACGGCCCTGGTGGCGGCCGAATTTGGCTTCGAGGTGGATTA
CTTTCGCTCTTATGCCGCTTCGCAGATCAATTACATGCTAGGCCACGCAA
TGGAACGACTTCAAGGACGCGGTGATCAACCGCCAAAAGGCGTTTATGAA
CAAAATCCCGCGAACGCCCAAAGGCCTGAGCTACTACAACGAATGTCATG
AATACCGCAAGCGCCATGGCTGCGGGTGCGATTGCCTTTCGAAACCACGA
TCCAGCCTACGCAGCCACGCTTTTGCAGCACGCGGAGGAACTCTTTGCAT
TCGCCGACATGTGTCCCGGGGATTGGATTCGAAACGGGACAATCCCCGCC
GGAAATTTCTACAACGACGGTGGCCGCTACTTGGACGAGCATGCCTTTGC
CGCCGCCTGGTTGCACAAGGTACCGCCGCTGTTCGTTTTCCATACTGTCT
CTTTTTTCCTTTTTTTCTACTACCTCAAGCTGACGTTCTCTCATTCGAGT
CAAGCGCTCCTCTACTTTTCTGGCCTCCTCTCTCCCCTGTTCGTGCGCAC
GGCCAAGACATGCTTTATGAGTTTATCTTCACCCAAATCTCTCCCTCACT
CCCTCCAATTCTCGCTTTCATTCAGGCAACAGGCAAAAAAGAATACTTGG
ACAAGGCGATCGCCACCTTTTACCAATGCTGCTACGTTCCCGGCGGCTAT
CAAGTGAGCGTGCTCGACTGGGCGGACATGACTATGGGAATCAACCTTCT
TCTGTACGAGATCCCGTTAGATTGCGGACGAGGTAGATCATTGCCGGTGG
GGCCCTCCCGAGACCATCAACTATCTTCGCCGCTCCTACAAAGTCACCTG
CCTCAACCCGGGCTCCCAGCCAGGTGATTGCTGCGATGGCAAAAAATCGT
TTCTTATCGGTTTTGGGCCCTCTTGGCCCAATTCATACCATCATCGGGCA
GCGTCGTGCAAGGGTACCGACTGCCGTTGCACCCAGCAAGACTTTCCCCA
CATCTTATGGGGGGGATTGCTGGGTGGGCCGGAAAAGGATGACACAATTT
CGGACGAAGGCTGCCCAGATTTCATCCACATGGAAGTCGCCTTGGATTTC
TCAGCAGGATTCACGACTGCAGTGGCTGGATTAAAGCATTTGAGCCTGAG
AGGTATTCGGTATTAAGGGGCCTAATCGTTATGCTGCCAACGCTGCCTTC
ACGGCCCTGGTGGCGGCCGAATTTGGCTTCGAGGTGGATTACTTTCGCTC
TTATGCCGCTTCGCAGATCAATTACATGCTAGGCCACGCAATGGAACGAC
TTCAAGGACGCGGTGATCAACCGCCAAAAGGCGTTTATGAACAAAATCCC
GCGAACGCCCAAAGGCCTGAGCTACTACAACGAATGTCATGAATACCGCA
AGCGCCATGGCTGCGGGTGCGATTGCCTTTCGAAACCACGATCCAGCCTA
CGCAGCCACGCTTTTGCAGCACGCGGAGGAACTCTTTGCATTCGCCGACA
TGTGTCCCGGGGATTGGATTCGAAACGGGACAATCCCCGCCGGAAATTTC
TACAACGACGGTGGCCGCTACTTGGACGAGCATGCCTTTGCCGCCGCCTG
GTTGCACAAGGTACCGCCGCTGTTCGTTTTCCATACTGTCTCTTTTTTCC
TTTTTTTCTACTACCTCAAGCTGACGTTCTCTCATTCGAGTCAAGCGCTC
CTCTACTTTTCTGGCCTCCTCTCTCCCCTGTTCGTGCGCACGGCCAAGAC
ATGCTTTATGAGTTTATCTTCACCCAAATCTCTCCCTCACTCCCTCCAAT
TCTCGCTTTCATTCAGGCAACAGGCAAAAAAGAATACTTGGACAAGGCGA
TCGCCACCTTTTACCAATGCTGCTACGTTCCCGGCGGCTATCAAGTGAGC
GTGCTCGACTGGGCGGACATGACTATGGGAATCAACCTTCTTCTGTACGA
GATCCCGTTAGATTGCGGACGAGGTAGATCATTGCCGGTGGGGCCCTCCC
GAGACCATCAACTATCTTCGCCGCTCCTACAAAGTCACCTGCCTCAACCC
GGGCTCCCAGCCAGGTGATTGCTGCGATGGCAAAAAATCGTTTCTTATCG
GTTTTGGGCCCTCTTGGCCCAATTCATACCATCATCGGGCAGCGTCGTGC
AAGGGTACCGACTGCCGTTGCACCCAGCAAGACTTTCCCCACATCTTATG
GGGGGGATTGCTGGGTGGGCCGGAAAAGGATGACACAATTTCGGACGAAG
GCTGCCCAGATTTCATCCACATGGAAGTCGCCTTGGATTTCTCAGCAGGA
TTCACGACTGCAGTGGCTGGATTAAAGCATTTGAGCCTGAGAGGTATTCG
GTATTAAGGGGCCTAATCGTTATGCTGCCAACGCTGCCTTCACGGCCCTG
GTGGCGGCCGAATTTGGCTTCGAGGTGGATTACTTTCGCTCTTATGCCGC
TTCGCAGATCAATTACATGCTAGGCCACGCAATGGAACGACTTCAAGGAC
GCGGTGATCAACCGCCAAAAGGCGTTTATGAACAAAATCCCGCGAACGCC
CAAAGGCCTGAGCTACTACAACGAATGTCATGAATACCGCAAGCGCCATG
GCTGCGGGTGCGATTGCCTTTCGAAACCACGATCCAGCCTACGCAGCCAC
GCTTTTGCAGCACGCGGAGGAACTCTTTGCATTCGCCGACATGTGTCCCG
GGGATTGGATTCGAAACGGGACAATCCCCGCCGGAAATTTCTACAACGAC
GGTGGCCGCTACTTGGACGAGCATGCCTTTGCCGCCGCCTGGTTGCACAA
GGTACCGCCGCTGTTCGTTTTCCATACTGTCTCTTTTTTCCTTTTTTTCT
ACTACCTCAAGCTGACGTTCTCTCATTCGAGTCAAGCGCTCCTCTACTTT
TCTGGCCTCCTCTCTCCCCTGTTCGTGCGCACGGCCAAGACATGCTTTAT
GAGTTTATCTTCACCCAAATCTCTCCCTCACTCCCTCCAATTCTCGCTTT
CATTCAGGCAACAGGCAAAAAAGAATACTTGGACAAGGCGATCGCCACCT
TTTACCAATGCTGCTACGTTCCCGGCGGCTATCAAGTGAGCGTGCTCGAC
TGGGCGGACATGACTATGGGAATCAACCTTCTTCTGTACGAGATCCCGTT
AGATTGCGGACGAGGTAGATCATTGCCGGTGGGGCCCTCCCGAGACCATC
AACTATCTTCGCCGCTCCTACAAAGTCACCTGCCTCAACCCGGGCTCCCA
GCCAG back to top
|