EWM25995.1, cds4678 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25995.1 vs. NCBI_GenBank
Match: gi|585107903|gb|EWM25995.1| (endo-beta- -glucanase, partial [Nannochloropsis gaditana]) HSP 1 Score: 820.846 bits (2119), Expect = 0.000e+0 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0
Query: 1 IPLDCGRGRSLPVGPSRDHQLSSPLLQSHLPQPGLPASHEYRKRHGCGCDCLSKPRSSLRSHAFAARGGTLCIRRHVSRGLDSKRDNPRRKFLQRRWPLLGRACLCRRLVAQGTAAVRFPYCLFFPFFLLPQADVLSFESSAPLLFWPPLSPVRAHGQDMLYEFIFTQISPSLPPILAFIQATGKKEYLDKAIATFYQCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFMNKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLGDCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDFPHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLRGIRY 396
IPLDCGRGRSLPVGPSRDHQLSSPLLQSHLPQPGLPASHEYRKRHGCGCDCLSKPRSSLRSHAFAARGGTLCIRRHVSRGLDSKRDNPRRKFLQRRWPLLGRACLCRRLVAQGTAAVRFPYCLFFPFFLLPQADVLSFESSAPLLFWPPLSPVRAHGQDMLYEFIFTQISPSLPPILAFIQATGKKEYLDKAIATFYQCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFMNKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLGDCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDFPHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLRGIRY
Sbjct: 1 IPLDCGRGRSLPVGPSRDHQLSSPLLQSHLPQPGLPASHEYRKRHGCGCDCLSKPRSSLRSHAFAARGGTLCIRRHVSRGLDSKRDNPRRKFLQRRWPLLGRACLCRRLVAQGTAAVRFPYCLFFPFFLLPQADVLSFESSAPLLFWPPLSPVRAHGQDMLYEFIFTQISPSLPPILAFIQATGKKEYLDKAIATFYQCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFMNKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLGDCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDFPHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLRGIRY 396
BLAST of EWM25995.1 vs. NCBI_GenBank
Match: gi|585100259|gb|EWM20555.1| (beta- -endoglucanase [Nannochloropsis gaditana]) HSP 1 Score: 165.622 bits (418), Expect = 1.153e-42 Identity = 94/223 (42.15%), Postives = 132/223 (59.19%), Query Frame = 0
Query: 179 FIQATGKKEYLDKAIATFYQ-CCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFMNKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLGDCCDGKK--------SFLIGFGPSWPNSYHHRAASC-KGTDCRCTQQDFPHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSL 391
+ATG++EYLDKA + + CC Y W G+ LLLY+ T+ + +K N + K +TPKGL+Y+++WG NRYAAN AF ALVAA++G V+ R++A QI+YMLGD G S++ G+G +P + HHR +SC GT+C C PH+L+G L+GGP +D SD C D+ EV D++AGFT A+ L+HLSL
Sbjct: 292 LYEATGEQEYLDKAESLYAGGCCGSAWSYS-----WDAKAPGVQLLLYKHTRKSQYKTDSSNFVGGAIGK-GQTPKGLAYWDKWGSNRYAANGAFIALVAADYGIHVEDGRAWAMQQIHYMLGDAHGGINNATGLPFFSYVCGYGDDFPRAPHHRGSSCWSGTNCNCGSSPQPHVLYGALVGGPGNNDDYSDS-CSDYTRNEVTTDYNAGFTAALGALRHLSL 507
BLAST of EWM25995.1 vs. NCBI_GenBank
Match: gi|585107739|gb|EWM25871.1| (endo-beta- -glucanase [Nannochloropsis gaditana]) HSP 1 Score: 157.147 bits (396), Expect = 1.277e-39 Identity = 94/224 (41.96%), Postives = 132/224 (58.93%), Query Frame = 0
Query: 181 QATGKKEYLDKAI--ATFYQCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINR--------QKAFMNKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLGDCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDFPHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLRGI 394
+ATG YL +A+ A + G + W G+ LLLY+ T+ D K A + Q + I RTP+GL+YY WGP R+AAN AF AL+AA+ G +R++A SQI+YMLGD +G S+++GFG ++P + HHRAASC C C + L+G L+GGP++ D D+ C D+ H EV++D++AGF AVAGLKHLSL G+
Sbjct: 286 KATGCASYLSQALNLAEIFNKSDNMGAF-----GWDSKDAGVYLLLYQLTR--DTKHAKVFASYLADWLPQASSATAIKRTPRGLTYYLTWGPLRWAANTAFLALLAADMGLSPGPYRAFARSQIHYMLGD--NGNFSYVVGFGSTFPKAIHHRAASCGRYGCICDTTPSANTLYGALVGGPDEKDMYLDD-CRDYKHTEVSVDYNAGFQGAVAGLKHLSLMGL 499
BLAST of EWM25995.1 vs. NCBI_GenBank
Match: gi|585108151|gb|EWM26157.1| (beta- -endoglucanase [Nannochloropsis gaditana]) HSP 1 Score: 155.606 bits (392), Expect = 4.128e-39 Identity = 88/220 (40.00%), Postives = 131/220 (59.55%), Query Frame = 0
Query: 181 QATGKKEYLDKAIATFY-QCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFMNKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYML---GDCCDGKK----SFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDFPHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLR 392
+AT +YL+ A +Y CC V + S W + + L+LY+ T+ + D ++M + PRTPKGL ++++W PNRY+AN AF ALVAA+ G + ++A SQI+Y+L GD K S+ IGFG ++P + HHR ASC C C+ P+IL+G ++GGP K+D SD+ C +++ EVA D++AGFT+A AGL L L+
Sbjct: 258 KATKDAKYLEMAENDYYDNCCAVTNKTEFS---WDRKSSAVQLILYDLTKKEKYADGFAGFMDSWMYETPRTPKGLVFFDKWAPNRYSANTAFLALVAAKHGLVPTTYIAFAKSQIDYILKAGGDINPETKQPYYSYQIGFGDNFPRAPHHRGASCGNGWCGCSGSPQPNILYGAIVGGPGKNDDYSDD-CGNYVTNEVATDYNAGFTSACAGLAQLVLK 473
BLAST of EWM25995.1 vs. NCBI_GenBank
Match: gi|1176089015|ref|XP_020614867.1| (uncharacterized protein LOC110053019 [Orbicella faveolata]) HSP 1 Score: 158.688 bits (400), Expect = 6.493e-39 Identity = 93/221 (42.08%), Postives = 135/221 (61.09%), Query Frame = 0
Query: 181 QATGKKEYLDKAIATFYQCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFM--NKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLGDCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDF------PHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLRG 393
+AT K+YL KA +Y+ + G + W D G+ +LL E T+ +K AV +++ +++ TPKGL++ ++WGPNRY+AN AF ALVAA+ G + FR +A QI+YMLGD +SF++GFG + P HHR++SC + C +F P L+G L+GGP K+D +D+ DFI EVA D++AGF +AVAGLKHL+L G
Sbjct: 591 KATKDKKYLTKA-EQYYKQFGMNG--KPWAFSWDDKKAGVQVLLAEITKKASYKQAVDTFITSWLPGHEVHYTPKGLAWRDQWGPNRYSANTAFLALVAADQGVKPSAFREFAKKQIHYMLGDSG---RSFVVGFGTNPPERPHHRSSSCPLSPVPCNWDNFNSPSANPQTLYGALVGGPGKNDEYTDD-RKDFIKNEVATDYNAGFQSAVAGLKHLALTG 804
BLAST of EWM25995.1 vs. NCBI_GenBank
Match: gi|1191032496|ref|XP_020893299.1| (uncharacterized protein LOC110232443 [Exaiptasia pallida]) HSP 1 Score: 157.147 bits (396), Expect = 2.591e-38 Identity = 91/220 (41.36%), Postives = 131/220 (59.55%), Query Frame = 0
Query: 181 QATGKKEYLDKAIATFYQCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFM--NKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLGDCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDF------PHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLR 392
+AT K EYL KA ++YQ + G + W D G LLL E T +++K+ + +++ + TPKGL++ ++WGPNRY+AN AF ALVAA+ G + D +R++A QI+YMLGD +SF++GFG + P HHR++SC CT P +L G L+GGP+ +D D+ D+I EVA D++AGF +AVAGLK LSL
Sbjct: 620 RATNKAEYLSKA-ESYYQQFNMNG--KAWTFSWDDKKAGAQLLLAEITGKSNYKNDIKGYLDSWLPGRDVKYTPKGLAWRDQWGPNRYSANTAFLALVAADNGLKPDIYRNFAKKQIHYMLGDSG---RSFVVGFGANPPKRPHHRSSSCPDRPAPCTHDALNAPGANPQVLXGALVGGPDVNDNFKDD-RKDYIENEVATDYNAGFQSAVAGLKXLSLN 832
BLAST of EWM25995.1 vs. NCBI_GenBank
Match: gi|999979262|gb|KXJ18436.1| (Endoglucanase A [Exaiptasia pallida]) HSP 1 Score: 156.762 bits (395), Expect = 3.231e-38 Identity = 91/220 (41.36%), Postives = 131/220 (59.55%), Query Frame = 0
Query: 181 QATGKKEYLDKAIATFYQCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFM--NKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLGDCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDF------PHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLR 392
+AT K EYL KA ++YQ + G + W D G LLL E T +++K+ + +++ + TPKGL++ ++WGPNRY+AN AF ALVAA+ G + D +R++A QI+YMLGD +SF++GFG + P HHR++SC CT P +L G L+GGP+ +D D+ D+I EVA D++AGF +AVAGLK LSL
Sbjct: 645 RATNKAEYLSKA-ESYYQQFNMNG--KAWTFSWDDKKAGAQLLLAEITGKSNYKNDIKGYLDSWLPGRDVKYTPKGLAWRDQWGPNRYSANTAFLALVAADNGLKPDIYRNFAKKQIHYMLGDSG---RSFVVGFGANPPKRPHHRSSSCPDRPAPCTHDALNAPGANPQVLXGALVGGPDVNDNFKDD-RKDYIENEVATDYNAGFQSAVAGLKXLSLN 857
BLAST of EWM25995.1 vs. NCBI_GenBank
Match: gi|585112583|gb|EWM29977.1| (beta- -endoglucanase [Nannochloropsis gaditana]) HSP 1 Score: 153.295 bits (386), Expect = 3.685e-38 Identity = 80/196 (40.82%), Postives = 117/196 (59.69%), Query Frame = 0
Query: 179 FIQATGKKEYLDKAIATFYQCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFMNKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLG-------DCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDFPHILWGGLLGGP-EKDDTISDEGCPDF 366
+ATG+ +YL KA F CC G DW + G+ L+LY TQ ++ + N + ++ K P+TPKGL++++ WG NRY AN AF AL+AA +G + ++A S+I Y+L D K S+LIGFG +P + HHR++SCKGT C C+++ P+IL+G L+GGP EKDD + D C D+
Sbjct: 252 LFKATGEADYLHKAEKFFDACCGGKDGTTKVDYDWGEKGPGVQLMLYHLTQAEKYRQGITNYLQTWLKK-PKTPKGLTFFSPWGSNRYTANTAFIALMAATYGLNPSKYSAWAESEITYILTAGGKVNPDTGKPKYSYLIGFGEDFPRAPHHRSSSCKGTKCDCSRKPHPYILYGALVGGPGEKDDYVDD--CTDY 444
BLAST of EWM25995.1 vs. NCBI_GenBank
Match: gi|1191032488|ref|XP_020893295.1| (uncharacterized protein LOC110232439 [Exaiptasia pallida] >gi|999979281|gb|KXJ18455.1| Endoglucanase A [Exaiptasia pallida]) HSP 1 Score: 148.288 bits (373), Expect = 1.317e-36 Identity = 88/220 (40.00%), Postives = 127/220 (57.73%), Query Frame = 0
Query: 181 QATGKKEYLDKAIATFYQCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFM--NKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGFEVDYFRSYAASQINYMLGDCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQD------FPHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLR 392
+AT YL KA A + + S W + T G+ +LL E T N +K V +++ N + TPKGL++ +WGPNRYAAN AF AL+AA G + + +R++A QI+YMLGD +SFL+GFG S+P HH ++SC C+ D P IL G L+GGP+++D +DE D++ EV D++AGF +AVAGLK L++
Sbjct: 254 RATXNVNYLKKAEAYYKTFGMSDKPWAFS---WDEKTAGVQVLLAEITGKNSYKKDVQEYLDSWLPGNDVKYTPKGLAWRAKWGPNRYAANTAFLALLAANNGMKPNDYRTFAKKQIHYMLGDSG---QSFLVGFGKSFPQRPHHASSSCPXKPXPCSWNDNRNPGPNPQILTGALVGGPDQNDNFNDERS-DYVQNEVTTDYNAGFQSAVAGLKQLAMN 466
BLAST of EWM25995.1 vs. NCBI_GenBank
Match: gi|762128785|ref|XP_011447501.1| (PREDICTED: endoglucanase 13-like [Crassostrea gigas]) HSP 1 Score: 149.058 bits (375), Expect = 1.314e-35 Identity = 95/221 (42.99%), Postives = 128/221 (57.92%), Query Frame = 0
Query: 182 ATGKKEYLDKAIATFYQCCYVPGGYQVSVLDWADMTMGINLLLYEATQWNDFKDAVINRQKAFM--NKIPRTPKGLSYYNEWGPNRYAANAAFTALVAAEFGF-EVDYFRSYAASQINYMLGDCCDGKKSFLIGFGPSWPNSYHHRAASCKGTDCRCTQQDF------PHILWGGLLGGPEKDDTISDEGCPDFIHMEVALDFSAGFTTAVAGLKHLSLRG 393
AT K Y AI TFY Y PG + DW D TM ++LLYE TQ +K AV N ++M + TP GL++ EWG RY+ANAAF AL+AA+ G ++ +A SQI+YMLGD D S++IG+G ++P HHRA+SC C D+ PH+L G L+GGP++ D D +F EVA D++AGF +AVAGL H ++ G
Sbjct: 548 ATNKTGYRSDAI-TFYNS-YSPGRW---AYDWDDKTMLCDVLLYEITQETKYKSAVENFVTSYMPGGSVQYTPCGLAWRLEWGSLRYSANAAFIALLAADAGIGNTANYKQWAMSQIHYMLGDNADA-FSYVIGYGSNYPLKPHHRASSCDSPPAVCDWNDYNSPDPNPHVLQGALVGGPDQYDNYED-ARDNFRTNEVACDYNAGFQSAVAGLLHFAVNG 761 The following BLAST results are available for this feature:
BLAST of EWM25995.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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