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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100150g9.10696.mrna |
| Orig protein id | gnl|cribi|Naga_100150g9.10696 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:21855..24074 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4672 ID=rna4672|Name=rna4672|organism=Nannochloropsis gaditana|type=mRNA|length=2157bp
ATGTATCAGACCGCTCACGACACGACAACGGGTAGCGGGGTTTCCTCCTC
CGTGGGCGCAGGAAGTGGCATCACAGATTACGACGATCAACCCACAATCA
TCCACACAAATGAAGATGCCAGCAGCCGCCGCCGTCGATGGGTGCTGCGC
ATGGCGATGGGCATGATGATGACGGCATGTCTGGTGCTGATTGGAGCCGT
GGTCTTGGGCAAGAGCGATTCTCGTGGGGGGTCTGGGTTATTGCGTCGGG
GGCCTGGTCCCGCGCTGGAAGCAGCCAGCATGGAGGGTCTGAAGGGCGCT
ACGTCCCCCTGCGGTGGCTCGTGCGGATGCAAATCTGCCGAAGGCTGCGG
CTGTGGATCATCCTGCTCAGGGTGCACGTCTATGTCGACACATTCCTCGG
AGAAGCTGTCGCTCCCTCCCTCCTCCATGGCCCACGGGGGCTGTGGCTGC
TGCCATGGCGGGTGCGCCTGCGGGAAGGGCGAAGGCAAGGAGGAGACATC
GCTCTCGCTTGTGGACAGTGCGGATGAAGAGGATGAGAGCCTTTCACCGC
CACTCTCAGCCCGCGAAGCGGCCTCCTCGCCTCTGCCTCCCTCGGCGCTC
GAACTCTCCAAGAAGAAGCACCACCACAAGCACAAGCACCACCATGGTGA
GCATCACCCGCCCCTCACCGACACCACCCCCGGCAGCGGGGAGGATGCCT
CTAAATCGCCCACGACTGAGAAGAAAGGCAAGGTCGCTGCGCCCGACAAC
AGTTCTTCCCCTTTCGACTGGCAGAAATACGTGCCCAAGGGCGTGGGTGC
AGGCGGGGCAGGCGTGGGGGGCGGGGGCGCCACGGCGGGCCCCTCCTCCT
CTGGGCCCTCGGACTGGACCAAGTACGTCCCGCCCATCACCGTGAACGTG
AGCAACGACAACACCAACTCCTCCACGGCCACCACGGTGCAAACCGGGGC
CGACCAGGCGCCTGTGGATTGGACCAAGTACGTCCCCCCCGGGATCAACA
TCACGGTGCACCACACCAACGCCACGAGCAATGCCACGCATACCACGCAC
GTCTCTGCGCTCCATCATTCCCATCCGGACTCCCCCAAGAAGAAGGACTC
GACCCTCCTCGGCTCCTCTCTGGGCGCCTCTTCCTCCGCCGCCCCCTCCC
CCGGTGGCTTCGACTGGAGCACGGACAGCCGTCCCCCCCCCCCTCCTCCT
CTTCTTCCTCCTCCTCCTCCTCCTCCTCTGCCTCCGACGAGCACCGGAAG
CGCCTCGACGGCTCTGAGCAAAAGCAAGAGCTCCTCCTCCTCCTCCTCCC
CCTCCTCCCAGGGCGGCTTCGACTGGTCCAAGTACACGAACGGGGCAAGT
GGCAAAGGTGGAAGCTCCGGGAGCGGAGGGCCTCCCTCCGGCCCGCCTTC
CTCCTCCTCCTCGGGCGGGAGCAGCGGCGGAAGCCCAGGTGGCTTCGACT
GGTCAAAGTACACCCACGGTGGCGGGGCACCGTCCTCGACCTCCGCGGAG
AAAGGGAAGAAGAAGGACAAGGATGCCAAGGGGGGCGCGGGGGGCTCGAG
CATGGGCCCGGGAGGCGATTGGTCTCACTTTATTCCTGGCGGGGCGGGAG
GAAGCAGCGGACCCGCCCGGCTCTATCAGGACTCGGGACCTCTCCCTTCC
GCTCTCCCGCGTGAGCAGGAGGGACCTCCTGCGCCCAATGGTGCCATCTC
TTTGCACGGTACTGGCATGCACTTTCCCTCTCCCGAAGTTCCGGAACAGC
CGGAACAAAAGGAGCAGCCGGAACAAAAGGAGCAGCCGCAGCAGGCTGGA
GGAGAGAGGCTTGGGCTATATGCTGATTGGTCGACGCTTCGGGCTTTTCC
ACAGGGCTGGTGGCCGTGGGGAGAGAGAAACACGGCGGGGATGGCGCTAA
AGGGGCAGGCAGGGAGCCCTCTAGATGCTCACTTGGGGAACGACTGGTAC
GACTGGCGGGGCTGGAGGCAAGGCGAAGAGGAGGGAGGGGCCAAGGGAGG
GATGGAAGCGGTTATGGGAGTTGATGAAATTGAAAGCCAAGAAAGCCAAG
TGGAGTTAAGGGGGCGGCAAGGGGTACGGGCGTTAGGTGAAGAACAATCA
TTACGCGCGGGGCGTAGACGGAATTGCGCGAACTTACAAGAAAAGAAGAA
GACGTAA back to topprotein sequence of rna4672 >rna4672-protein ID=rna4672-protein|Name=rna4672|organism=Nannochloropsis gaditana|type=polypeptide|length=296bp
MDSFATPELPNTNSDRGNVGERHIVRPNDANKIPATAVAGPFKPATPPAV
VGGDPYQGSGPSNWPPSFQDRDSTEDTSYEKRGRQGGRALQEEEGVDDLE
LENGDFDEDSTSMERNGKDWAGREAFDSGFEDLWRKLDKWAPGSREEASH
STLAMSQALSEGARVSYAPLSYPSGADLAPNPETERAAAGSFQKSVMEEE
GSTLIERAFVDQRVPASQLVGDYKPEHPVPAPGSSAMPADAQQSLGLPDT
GEWKMSMLKEEEEERAVFLGTFRSPSDTKGVWGLQVEGVEGHNARD back to topmRNA from alignment at CM002464.1:21855..24074- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4672 ID=rna4672|Name=rna4672|organism=Nannochloropsis gaditana|type=mRNA|length=2220bp|location=Sequence derived from alignment at CM002464.1:21855..24074- (Nannochloropsis gaditana)
ATCCGCTCCAACCTCAGAAGTGCCGAATGCGAAGTGATATAATGAACTTC
CCCTAGGGGGGGACTGTCTCAGCACATCATATGCATTTACTATGAATATT
TATATCTAGCGCTACAAGTATGTATGAACAAGTTTATCACTACACATATT
TGACCTTGAATTCTCAGTGTCAGTCCCTTTTCCCCCCGCCCTTCGCCTCA
CAGTGGCGCAAATGCCCTTGACAACAACACCACACCCCTCAGACCTGCCG
TAATTACTGAGCAGTCTTCCACTGTGCTTGCAAGTAATACAGAAAACGAT
ATGGACTCTTTTGCAACTCCTGAATTGCCTAATACCAATTCCGATCGCGG
TAATGTCGGGGAGAGGCATATTGTCAGGCCGAACGATGTAAGTAATACAT
GAGGGGAACGGAAGGAAATATGATCAGATGGCGAAAATGGAGAGGGCCTT
TGAAGGGATTGTAGGGAGACAGCAGCGTGTCTCGCAACTCTCTTGCGACG
CCGCAGGCCCTTACTTCCAAGCCCGCTTTCTTTCCCTCCTTTCTGTCCGT
CGAGTAGGCAAATAAAATCCCGGCGACGGCTGTAGCAGGGCCATTCAAAC
CCGCTACTCCACCTGCAGTCGTCGGTGGAGATGTGAGTGTCTTTTCTTTT
GTCGACGCAGTTCTTCGTCTGTTTGTACAGTGCTTGCCACACAAAGCTCT
CTGTTCTGCCCCCTTTTGCCTTTGTCGTCGTCTGGATTCAGTTGTCTATG
ACATCATTTCTTGTGCATAAATAAAACAATAATTTTAACCTGGTTGTAAA
GGAATATTGACTCTTTTATTCCTTTCATCTCTCCCCCGGTCTTTAATTCC
TTGGACCGTTATCCTCCGTGAAACCGCTTCCGAAACCCGCCTGTCTCATC
ATCACATACATGCACATTTCTTCCGTTCTCCAGCCATACCAGGGCAGTGG
ACCATCCAATTGGCCTCCTTCCTTCCAAGATCGTGATTCCACTGAGGATA
CTTCTTACGAGAAACGTGGAAGGCAGGGAGGGAGAGCGCTGCAGGAGGAG
GAAGGGGTGGACGACCTGGAGTTGGAGAATGGTGATTTCGATGAAGACTC
GACGTCGATGGAGAGGAATGGAAAGGACTGGGCAGGGAGGGAAGCATTTG
ACAGCGGTTTCGAAGATTTGTGGCGAAAGCTGGACAAATGGGCACCCGGT
AGCAGGGAGGAGGCATCTCACAGCACGCTTGCTATGGTGAGAACGACCCG
GAACTTGCAACACACATCTCTCCCGTACGCGTTTCCCTAATGTCTCCGAT
TCATTCCCGCACAATCCTATACAGAGCCAAGCGCTTTCCGAAGGTGCGAG
AGTCAGCTACGCCCCGCTTTCCTATCCTTCAGGCGCCGACCTTGCCCCCA
ACCCAGAGACGGAACGAGCAGCAGCTGGCAGCTTCCAGAAGAGTGTCATG
GAGGAGGAAGGTTCCACATTAATCGAGCGGGCCTTCGTGGATCAGCGCGT
GCCTGCCTCGCAGCTTGTGGGAGACTACAAGCCCGAGCACCCGGTGCCGG
CGCCGGGCTCGAGTGCCATGCCCGCAGACGCGCAGCAAAGCTTAGGCCTC
CCTGATACGGGGGAGTGGAAAATGTCGATGCTAAAAGAGGAGGAGGAGGA
ACGAGCGGTGTTTCTGGGCACCTTTCGGTCGCCAAGCGACACAAAGGGGG
TTTGGGGTCTGCAAGTAGAGGGGGTAGAAGGGCACAATGCCAGGGATTAA
TCCGTTTTGGGGGGGGAGTAAAAGCTGCTTTTTGGAAAATATTGGTGATA
TTTCCCACTAAAAAGGCTCTGTCATAAATACAGAGATCGAGTGAGCTACT
GAAGTGGCATACACGTGAAACGAAACCGGGGGTACACACACCGTTAATAG
TTTAGGTATCTCACAAGAGATTTTAATGCTTACAACTTTATGTTCACTTC
TTCAGCTCTCACGAATTGATAAAGAAGTTTAAGTAAAGCACTGGGTGATA
GATTTAGAATGTGTAGGGACTTAATTCAGTTTGAAAAAAAACTAAGGCAT
TAATTCGATTCTTTTGCAGTCTCTTGGTCATTCGTCCGCAATCATCAAGA
TGGCAGCGGAGAGAAATCAATAAGAGCATTCCTTTAAGGTAAAAGCGTAT
TTCAAAGTCTATGTTCGTCATAAAAGAACAGATGCAACTAGTTTCCTCTT
TTACACGATTGAAGACCGAG back to topCoding sequence (CDS) from alignment at CM002464.1:21855..24074- >rna4672 ID=rna4672|Name=rna4672|organism=Nannochloropsis gaditana|type=CDS|length=3564bp|location=Sequence derived from alignment at CM002464.1:21855..24074- (Nannochloropsis gaditana)
AGCCAAGCGCTTTCCGAAGGTGCGAGAGTCAGCTACGCCCCGCTTTCCTA
TCCTTCAGGCGCCGACCTTGCCCCCAACCCAGAGACGGAACGAGCAGCAG
CTGGCAGCTTCCAGAAGAGTGTCATGGAGGAGGAAGGTTCCACATTAATC
GAGCGGGCCTTCGTGGATCAGCGCGTGCCTGCCTCGCAGCTTGTGGGAGA
CTACAAGCCCGAGCACCCGGTGCCGGCGCCGGGCTCGAGTGCCATGCCCG
CAGACGCGCAGCAAAGCTTAGGCCTCCCTGATACGGGGGAGTGGAAAATG
TCGATGCTAAAAGAGGAGGAGGAGGAACGAGCGGTGTTTCTGGGCACCTT
TCGGTCGCCAAGCGACACAAAGGGGGTTTGGGGTCTGCAAGTAGAGGGGG
TAGAAGGGCACAATGCCAGGGATTAACCATACCAGGGCAGTGGACCATCC
AATTGGCCTCCTTCCTTCCAAGATCGTGATTCCACTGAGGATACTTCTTA
CGAGAAACGTGGAAGGCAGGGAGGGAGAGCGCTGCAGGAGGAGGAAGGGG
TGGACGACCTGGAGTTGGAGAATGGTGATTTCGATGAAGACTCGACGTCG
ATGGAGAGGAATGGAAAGGACTGGGCAGGGAGGGAAGCATTTGACAGCGG
TTTCGAAGATTTGTGGCGAAAGCTGGACAAATGGGCACCCGGTAGCAGGG
AGGAGGCATCTCACAGCACGCTTGCTATGGCAAATAAAATCCCGGCGACG
GCTGTAGCAGGGCCATTCAAACCCGCTACTCCACCTGCAGTCGTCGGTGG
AGATATGGACTCTTTTGCAACTCCTGAATTGCCTAATACCAATTCCGATC
GCGGTAATGTCGGGGAGAGGCATATTGTCAGGCCGAACGATAGCCAAGCG
CTTTCCGAAGGTGCGAGAGTCAGCTACGCCCCGCTTTCCTATCCTTCAGG
CGCCGACCTTGCCCCCAACCCAGAGACGGAACGAGCAGCAGCTGGCAGCT
TCCAGAAGAGTGTCATGGAGGAGGAAGGTTCCACATTAATCGAGCGGGCC
TTCGTGGATCAGCGCGTGCCTGCCTCGCAGCTTGTGGGAGACTACAAGCC
CGAGCACCCGGTGCCGGCGCCGGGCTCGAGTGCCATGCCCGCAGACGCGC
AGCAAAGCTTAGGCCTCCCTGATACGGGGGAGTGGAAAATGTCGATGCTA
AAAGAGGAGGAGGAGGAACGAGCGGTGTTTCTGGGCACCTTTCGGTCGCC
AAGCGACACAAAGGGGGTTTGGGGTCTGCAAGTAGAGGGGGTAGAAGGGC
ACAATGCCAGGGATTAACCATACCAGGGCAGTGGACCATCCAATTGGCCT
CCTTCCTTCCAAGATCGTGATTCCACTGAGGATACTTCTTACGAGAAACG
TGGAAGGCAGGGAGGGAGAGCGCTGCAGGAGGAGGAAGGGGTGGACGACC
TGGAGTTGGAGAATGGTGATTTCGATGAAGACTCGACGTCGATGGAGAGG
AATGGAAAGGACTGGGCAGGGAGGGAAGCATTTGACAGCGGTTTCGAAGA
TTTGTGGCGAAAGCTGGACAAATGGGCACCCGGTAGCAGGGAGGAGGCAT
CTCACAGCACGCTTGCTATGGCAAATAAAATCCCGGCGACGGCTGTAGCA
GGGCCATTCAAACCCGCTACTCCACCTGCAGTCGTCGGTGGAGATATGGA
CTCTTTTGCAACTCCTGAATTGCCTAATACCAATTCCGATCGCGGTAATG
TCGGGGAGAGGCATATTGTCAGGCCGAACGATAGCCAAGCGCTTTCCGAA
GGTGCGAGAGTCAGCTACGCCCCGCTTTCCTATCCTTCAGGCGCCGACCT
TGCCCCCAACCCAGAGACGGAACGAGCAGCAGCTGGCAGCTTCCAGAAGA
GTGTCATGGAGGAGGAAGGTTCCACATTAATCGAGCGGGCCTTCGTGGAT
CAGCGCGTGCCTGCCTCGCAGCTTGTGGGAGACTACAAGCCCGAGCACCC
GGTGCCGGCGCCGGGCTCGAGTGCCATGCCCGCAGACGCGCAGCAAAGCT
TAGGCCTCCCTGATACGGGGGAGTGGAAAATGTCGATGCTAAAAGAGGAG
GAGGAGGAACGAGCGGTGTTTCTGGGCACCTTTCGGTCGCCAAGCGACAC
AAAGGGGGTTTGGGGTCTGCAAGTAGAGGGGGTAGAAGGGCACAATGCCA
GGGATTAACCATACCAGGGCAGTGGACCATCCAATTGGCCTCCTTCCTTC
CAAGATCGTGATTCCACTGAGGATACTTCTTACGAGAAACGTGGAAGGCA
GGGAGGGAGAGCGCTGCAGGAGGAGGAAGGGGTGGACGACCTGGAGTTGG
AGAATGGTGATTTCGATGAAGACTCGACGTCGATGGAGAGGAATGGAAAG
GACTGGGCAGGGAGGGAAGCATTTGACAGCGGTTTCGAAGATTTGTGGCG
AAAGCTGGACAAATGGGCACCCGGTAGCAGGGAGGAGGCATCTCACAGCA
CGCTTGCTATGGCAAATAAAATCCCGGCGACGGCTGTAGCAGGGCCATTC
AAACCCGCTACTCCACCTGCAGTCGTCGGTGGAGATATGGACTCTTTTGC
AACTCCTGAATTGCCTAATACCAATTCCGATCGCGGTAATGTCGGGGAGA
GGCATATTGTCAGGCCGAACGATAGCCAAGCGCTTTCCGAAGGTGCGAGA
GTCAGCTACGCCCCGCTTTCCTATCCTTCAGGCGCCGACCTTGCCCCCAA
CCCAGAGACGGAACGAGCAGCAGCTGGCAGCTTCCAGAAGAGTGTCATGG
AGGAGGAAGGTTCCACATTAATCGAGCGGGCCTTCGTGGATCAGCGCGTG
CCTGCCTCGCAGCTTGTGGGAGACTACAAGCCCGAGCACCCGGTGCCGGC
GCCGGGCTCGAGTGCCATGCCCGCAGACGCGCAGCAAAGCTTAGGCCTCC
CTGATACGGGGGAGTGGAAAATGTCGATGCTAAAAGAGGAGGAGGAGGAA
CGAGCGGTGTTTCTGGGCACCTTTCGGTCGCCAAGCGACACAAAGGGGGT
TTGGGGTCTGCAAGTAGAGGGGGTAGAAGGGCACAATGCCAGGGATTAAC
CATACCAGGGCAGTGGACCATCCAATTGGCCTCCTTCCTTCCAAGATCGT
GATTCCACTGAGGATACTTCTTACGAGAAACGTGGAAGGCAGGGAGGGAG
AGCGCTGCAGGAGGAGGAAGGGGTGGACGACCTGGAGTTGGAGAATGGTG
ATTTCGATGAAGACTCGACGTCGATGGAGAGGAATGGAAAGGACTGGGCA
GGGAGGGAAGCATTTGACAGCGGTTTCGAAGATTTGTGGCGAAAGCTGGA
CAAATGGGCACCCGGTAGCAGGGAGGAGGCATCTCACAGCACGCTTGCTA
TGGCAAATAAAATCCCGGCGACGGCTGTAGCAGGGCCATTCAAACCCGCT
ACTCCACCTGCAGTCGTCGGTGGAGATATGGACTCTTTTGCAACTCCTGA
ATTGCCTAATACCAATTCCGATCGCGGTAATGTCGGGGAGAGGCATATTG
TCAGGCCGAACGAT back to top
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