rna4669, rna4669 (mRNA) Nannochloropsis gaditana

Overview
Namerna4669
Unique Namerna4669
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length711
Alignment locationCM002464.1:14836..16561 -

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Properties
Property NameValue
Productferredoxin
Orig transcript idgnl|cribi|Naga_100150g6.10693.mrna
Orig protein idgnl|cribi|Naga_100150g6.10693
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:14836..16561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100150g6gene4507Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4669rna4669-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26017.1cds4657Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4669 ID=rna4669|Name=rna4669|organism=Nannochloropsis gaditana|type=mRNA|length=711bp
GACCGTCGCCAAAAACCTCAACATAGACGAAAGGCAAAAGCTCACACCTG
CCGACTCTGCACGTATGCAGCAGATCATGCCACGCCGGACAGCATTCATA
GGTACAAGCGTCCCAAAGCCAGTCGCCGTGATGAAAAGGGGGAGAAATAG
CAAGGGCATCGCCTCTCTTATAGGCAAGTACCCCGGCGCTCTGGCGATGG
GCCTTCTTTCCCTTGCTTTTTGTTGGATTGTTTCCTTCTGGCGGCCGCTG
AGCTCCGAGCAATTTGCCAGACAATGGTTTGAGAACGGTGGTTTTTTGCC
TCAGTGCAACCAGGCTTTAACATTTGCCAAAGCTGCCTCAGAACTCCGGT
GTTATGCAAAGAACATTTTGGCGGATGGAAGTGTGAATCGAGGGCTGTTC
GGATTTAATAGTAAAAATTCTAGCCACATAAGTGACGCATGTGCATATGA
TTGCGCTTGTTCGTTTCGCGCTCTCTCCTCGCTGGCGAATAACAGACAGG
ATCGAAAGACATTGTCTCGCTATATGAATAGCACGGGCATTAATCTAGGG
AGCGTTATCGGAGATGCGGGTCCACCTTGTAATGCCGTGGCCGAGGCTCT
GATCCTAGAAGGCTGGAGCATGCTGCAAATCCAAGGGGCGTGGGAATAGT
AATTCCTCATCATAACAACAAATGTGCAGGACGACAGGAGAAAGAAAGAC
TACAGATTTGA
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protein sequence of rna4669

>rna4669-protein ID=rna4669-protein|Name=rna4669|organism=Nannochloropsis gaditana|type=polypeptide|length=181bp
MRATPASQSSFLFFVFFWSLISSPVSGFLLQHPFSRKHQSCSRCLSSPEL
GPLPGPAPGPPPEPSPPLPSKGIVTVLGPDGAQLRVIEAKPGSNLRKTLQ
ASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGLRSEYEADKILKGRK
FGESEEYRLACQTTVERGEATVVVRPPKKGK
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mRNA from alignment at CM002464.1:14836..16561-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4669 ID=rna4669|Name=rna4669|organism=Nannochloropsis gaditana|type=mRNA|length=1726bp|location=Sequence derived from alignment at CM002464.1:14836..16561- (Nannochloropsis gaditana)
TGCACTTGCCTTCCTCGGGTGTCCAACCCCGTTCAACCCCGTCGCGCTTA
CGTATGTCACAGTAAACCAATTACATGGAATGCACCTATGCTTGCTTACC
ATAGTATGCATAATCAGGAGCTGATGTCACCAACATAAGAAGTAATTTCT
CACACAAGCAGTGCGACTTCCTCAGTCTTCCACGCATACAGTAGGTCGAT
GCGTGCAACGCCTGCGAGTCAGTCATCCTTCCTATTCTTCGTCTTCTTCT
GGAGCCTGATATCCTCTCCTGTTTCGGGATTTCTCTTGCAACATCCTTTT
TCAAGAAAACACCAATCTTGTAGCAGATGTCTCTCTTCACCCGAACTCGG
TCCCCTCCCCGGCCCTGCTCCCGGGCCTCCTCCCGAGCCCTCTCCTCCCC
TGCCCAGGTACGGGGTCTTGTACTAACAGAAGGAAAACGTCAATGACTGA
AATGAGGGATAACCTGAAGCCCATACAATGGCCTTAAGCATGCATTCTGA
AGTCAGTCGGTAGGGCTTGCATTCTCTTATCACTGTCAAACGTGCTTTCG
AATTATCAGGGACTGCCACTTACTTTTCGACCTCTGTATTTGCTTCCCAC
GTTGACAGTAAAGGCATTGTCACCGTTCTAGGGCCGGATGGCGCGCAGCT
CAGAGTGATTGAAGCGAAGCCCGGATCCAACCTGAGAAAGACCCTACAAG
CCAGCAAGATCGACGTGTACGACCTGATGGGCAAGATGACCAATTGCAAT
GGGTAAGGATGGGTAACCCAGATCCAGGAAGTATCTCTCGATACTTTCTC
TACGATACATCTTACAAGCATGTGAGACTGAGACATATTTATGGCGCCAC
TCCTTCTTCATCTTCATACAGAGCGGGTCAATGCGGCACTTGCGTCGTAA
AAGTCACTAGCCCGTCCTGGGGTCTCCGCAGTGAGTATGAGGCAGACAAG
ATTCTCAAAGGGAGAAAATTCGGGGAAAGCGAGGAGTATCGATTAGCCTG
TCAAACGACAGTAGAAAGAGGGGAGGCGACTGTGGTGGTTCGACCGCCCA
AGAAAGGAAAATGACCATTGGAGATGACGCAAGCAAAAGCAACTGGAAAG
AAAGAGGACGTTTTGCCAATGCACGTGCGCCTTTTTCAAATCTGTAGTCT
TTCTTTCTCCTGTCGTCCTGCACATTTGTTGTTATGATGAGGAATTACTA
TTCCCACGCCCCTTGGATTTGCAGCATGCTCCAGCCTTCTAGGATCAGAG
CCTCGGCCACGGCATTACAAGGTGGACCCGCATCTCCGATAACGCTCCCT
AGATTAATGCCCGTGCTATTCATATAGCGAGACAATGTCTTTCGATCCTG
TCTGTTATTCGCCAGCGAGGAGAGAGCGCGAAACGAACAAGCGCAATCAT
CTGCAAGACAGGAAGGGGGAAGACAGTAAGGAGAGATGAGAAGTCATTGA
GAGGAGGGAGAAAGCCATGCGTGGATACACAAACTTACATGCACATGCGT
CACTTATGTGGCTAGAATTTTTACTATTAAATCCGAACAGCCCTGTTTGG
AGAAAAAAAAAGTTACATCTCTTTCCCGTACAAATTATGTCCTTTCATAG
TAATTGCCCTCACCTCGATTCACACTTCCATCCGCCAAAATGTTCTTTGC
ATAACACCGGAGTTCTGAGGCAGCTTTGGCAAATGTTAAAGCCTGGTTGC
ACTGAGGCAAAAAACCACCGTTCTCA
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Coding sequence (CDS) from alignment at CM002464.1:14836..16561-

>rna4669 ID=rna4669|Name=rna4669|organism=Nannochloropsis gaditana|type=CDS|length=1638bp|location=Sequence derived from alignment at CM002464.1:14836..16561- (Nannochloropsis gaditana)
AGCGGGTCAATGCGGCACTTGCGTCGTAAAAGTCACTAGCCCGTCCTGGG
GTCTCCGCAGTGAGTATGAGGCAGACAAGATTCTCAAAGGGAGAAAATTC
GGGGAAAGCGAGGAGTATCGATTAGCCTGTCAAACGACAGTAGAAAGAGG
GGAGGCGACTGTGGTGGTTCGACCGCCCAAGAAAGGAAAATGATAAAGGC
ATTGTCACCGTTCTAGGGCCGGATGGCGCGCAGCTCAGAGTGATTGAAGC
GAAGCCCGGATCCAACCTGAGAAAGACCCTACAAGCCAGCAAGATCGACG
TGTACGACCTGATGGGCAAGATGACCAATTGCAATGGATGCGTGCAACGC
CTGCGAGTCAGTCATCCTTCCTATTCTTCGTCTTCTTCTGGAGCCTGATA
TCCTCTCCTGTTTCGGGATTTCTCTTGCAACATCCTTTTTCAAGAAAACA
CCAATCTTGTAGCAGATGTCTCTCTTCACCCGAACTCGGTCCCCTCCCCG
GCCCTGCTCCCGGGCCTCCTCCCGAGCCCTCTCCTCCCCTGCCCAGAGCG
GGTCAATGCGGCACTTGCGTCGTAAAAGTCACTAGCCCGTCCTGGGGTCT
CCGCAGTGAGTATGAGGCAGACAAGATTCTCAAAGGGAGAAAATTCGGGG
AAAGCGAGGAGTATCGATTAGCCTGTCAAACGACAGTAGAAAGAGGGGAG
GCGACTGTGGTGGTTCGACCGCCCAAGAAAGGAAAATGATAAAGGCATTG
TCACCGTTCTAGGGCCGGATGGCGCGCAGCTCAGAGTGATTGAAGCGAAG
CCCGGATCCAACCTGAGAAAGACCCTACAAGCCAGCAAGATCGACGTGTA
CGACCTGATGGGCAAGATGACCAATTGCAATGGATGCGTGCAACGCCTGC
GAGTCAGTCATCCTTCCTATTCTTCGTCTTCTTCTGGAGCCTGATATCCT
CTCCTGTTTCGGGATTTCTCTTGCAACATCCTTTTTCAAGAAAACACCAA
TCTTGTAGCAGATGTCTCTCTTCACCCGAACTCGGTCCCCTCCCCGGCCC
TGCTCCCGGGCCTCCTCCCGAGCCCTCTCCTCCCCTGCCCAGAGCGGGTC
AATGCGGCACTTGCGTCGTAAAAGTCACTAGCCCGTCCTGGGGTCTCCGC
AGTGAGTATGAGGCAGACAAGATTCTCAAAGGGAGAAAATTCGGGGAAAG
CGAGGAGTATCGATTAGCCTGTCAAACGACAGTAGAAAGAGGGGAGGCGA
CTGTGGTGGTTCGACCGCCCAAGAAAGGAAAATGATAAAGGCATTGTCAC
CGTTCTAGGGCCGGATGGCGCGCAGCTCAGAGTGATTGAAGCGAAGCCCG
GATCCAACCTGAGAAAGACCCTACAAGCCAGCAAGATCGACGTGTACGAC
CTGATGGGCAAGATGACCAATTGCAATGGATGCGTGCAACGCCTGCGAGT
CAGTCATCCTTCCTATTCTTCGTCTTCTTCTGGAGCCTGATATCCTCTCC
TGTTTCGGGATTTCTCTTGCAACATCCTTTTTCAAGAAAACACCAATCTT
GTAGCAGATGTCTCTCTTCACCCGAACTCGGTCCCCTCCCCGGCCCTGCT
CCCGGGCCTCCTCCCGAGCCCTCTCCTCCCCTGCCCAG
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Synonyms
Publications