EWM26017.1, cds4657 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26017.1 vs. NCBI_GenBank
Match: gi|585107932|gb|EWM26017.1| (ferredoxin [Nannochloropsis gaditana]) HSP 1 Score: 368.237 bits (944), Expect = 6.929e-129 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
Query: 1 MRATPASQSSFLFFVFFWSLISSPVSGFLLQHPFSRKHQSCSRCLSSPELGPLPGPAPGPPPEPSPPLPSKGIVTVLGPDGAQLRVIEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGLRSEYEADKILKGRKFGESEEYRLACQTTVERGEATVVVRPPKKGK 181
MRATPASQSSFLFFVFFWSLISSPVSGFLLQHPFSRKHQSCSRCLSSPELGPLPGPAPGPPPEPSPPLPSKGIVTVLGPDGAQLRVIEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGLRSEYEADKILKGRKFGESEEYRLACQTTVERGEATVVVRPPKKGK
Sbjct: 1 MRATPASQSSFLFFVFFWSLISSPVSGFLLQHPFSRKHQSCSRCLSSPELGPLPGPAPGPPPEPSPPLPSKGIVTVLGPDGAQLRVIEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGLRSEYEADKILKGRKFGESEEYRLACQTTVERGEATVVVRPPKKGK 181
BLAST of EWM26017.1 vs. NCBI_GenBank
Match: gi|553185802|ref|XP_005854309.1| (hypothetical protein NGA_0190300 [Nannochloropsis gaditana CCMP526] >gi|422294748|gb|EKU22048.1| hypothetical protein NGA_0190300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 242.662 bits (618), Expect = 5.584e-80 Identity = 120/130 (92.31%), Postives = 123/130 (94.62%), Query Frame = 0
Query: 1 MRATPASQSSFLFFVFFWSLISSPVSGFLLQHPFSRKHQSCSRCLSSPELGPLPGPAPGPPPEPSPPLPSKGIVTVLGPDGAQLRVIEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVT 130
MRATPASQSSFLFFVFFWSLISSPVSGFLLQHPFSRKHQSCSRCLSSPELGPLPGPAPGPPPEPSPPLPSKGIVTVLGPDGAQLRVIEAKPGSNLRKTLQASKIDVYDLMGKMTNCNG G T +++
Sbjct: 1 MRATPASQSSFLFFVFFWSLISSPVSGFLLQHPFSRKHQSCSRCLSSPELGPLPGPAPGPPPEPSPPLPSKGIVTVLGPDGAQLRVIEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGLGHGITRWTRIS 130
BLAST of EWM26017.1 vs. NCBI_GenBank
Match: gi|299470431|emb|CBN80192.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 108.227 bits (269), Expect = 1.236e-25 Identity = 56/94 (59.57%), Postives = 71/94 (75.53%), Query Frame = 0
Query: 87 IEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVT-SPSWGLRSEYEADKILKGRKFGESEEYRLACQTTVERGEATVVVRPPKK 179
++AK G NLRKTL A K++VYD++GKMTNCNG GQCGTCVV+V + W RSE+EA K LKGR E RL+CQT ++ G+AT+V +PPKK
Sbjct: 173 LKAKTGDNLRKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEAEGWDPRSEWEAGK-LKGR----PESQRLSCQTVIQ-GDATIVTKPPKK 260
BLAST of EWM26017.1 vs. NCBI_GenBank
Match: gi|938300546|gb|KPQ34106.1| (2Fe-2S ferredoxin [Phormidesmis priestleyi Ana]) HSP 1 Score: 79.7221 bits (195), Expect = 7.003e-16 Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 0
Query: 87 IEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGL--RSEYEADKILKGRKFGESEEYRLACQTTVERGEATVVVRPPKK 179
IEA GSNLR Q + ID+Y MGK+T C G GQCGTCVV + + L R+ E +K+L+ R RLACQTT++ G A+VV +P KK
Sbjct: 13 IEASLGSNLRFKAQENNIDIYTFMGKLTQCGGYGQCGTCVVDIVEGAENLSPRTAVE-EKMLRKRPSS----CRLACQTTIQ-GSASVVTKPDKK 101
BLAST of EWM26017.1 vs. NCBI_GenBank
Match: gi|505029192|ref|WP_015216294.1| (ferredoxin [Anabaena cylindrica] >gi|428680912|gb|AFZ59678.1| ferredoxin [Anabaena cylindrica PCC 7122] >gi|1210084134|dbj|BAY03276.1| ferredoxin [Anabaena cylindrica PCC 7122]) HSP 1 Score: 76.2554 bits (186), Expect = 5.517e-15 Identity = 43/93 (46.24%), Postives = 56/93 (60.22%), Query Frame = 0
Query: 87 IEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGL--RSEYEADKILKGRKFGES-EEYRLACQTTVERGEATVVVRP 176
I G+NLR + ID+Y L+GKMTNC GAGQCGTC+V+V L R+++E RKF + + YRLACQT V G +VV +P
Sbjct: 13 IVTADGANLRLKAMENNIDIYTLIGKMTNCGGAGQCGTCIVQVVEGLENLSPRTDFE------NRKFKKKPDNYRLACQTLVN-GPVSVVTKP 98
BLAST of EWM26017.1 vs. NCBI_GenBank
Match: gi|748153534|ref|WP_039727861.1| (iron ABC transporter substrate-binding protein [Lyngbya confervoides] >gi|746958122|gb|KIF15661.1| iron ABC transporter substrate-binding protein [Aphanocapsa montana BDHKU210001] >gi|746984891|gb|KIF40583.1| iron ABC transporter substrate-binding protein [Lyngbya confervoides BDU141951]) HSP 1 Score: 74.7146 bits (182), Expect = 2.002e-14 Identity = 44/93 (47.31%), Postives = 55/93 (59.14%), Query Frame = 0
Query: 89 AKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGL--RSEYEADKILKGRKFGESEEYRLACQTTVERGEATVVVRPPKK 179
A G+NLR + ID+Y L+GKM NC G GQCGTCVV++T S L R++ E K+ K E RLACQT V G+ TV +P KK
Sbjct: 15 AADGANLRYKAMENDIDIYTLVGKMMNCGGYGQCGTCVVEITEGSENLSPRTQVEERKLRK-----RPENCRLACQTLV-NGDITVKTKPKKK 101
BLAST of EWM26017.1 vs. NCBI_GenBank
Match: gi|1121331620|ref|WP_073639519.1| (iron ABC transporter substrate-binding protein [Nostoc calcicola] >gi|1115278495|gb|OKH41797.1| iron ABC transporter substrate-binding protein [Nostoc calcicola FACHB-389]) HSP 1 Score: 74.7146 bits (182), Expect = 2.393e-14 Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 0
Query: 87 IEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGL--RSEYEADKILKGRKFGESEEYRLACQTTVERGEATVVVRP 176
+ A G+NLR + ID+Y L+GKMTNC G GQCGTC+V++ L R++ E K+ K + E YRLACQT V G +VV +P
Sbjct: 13 VVAADGANLRLKAMQNNIDIYTLIGKMTNCGGYGQCGTCIVEIVEGQQNLSPRTDVENRKLKK-----KPENYRLACQTLVN-GPVSVVTKP 98
BLAST of EWM26017.1 vs. NCBI_GenBank
Match: gi|750617793|ref|WP_040899661.1| (iron ABC transporter substrate-binding protein [Xenococcus sp. PCC 7305]) HSP 1 Score: 74.7146 bits (182), Expect = 3.043e-14 Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 0
Query: 92 GSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGL--RSEYEADKILKGRKFGESEEYRLACQTTVERGEATVVVRPPKKGK 181
G+NLR+ +KID+Y L GK+TNC G GQCGTCVV++ L R+ +E K+ K + + YRLACQ TV G TV +P K K
Sbjct: 18 GANLRERALENKIDIYTLKGKLTNCGGYGQCGTCVVEIVEGMENLSPRTAFEQRKLKK-----KPDSYRLACQATVN-GSVTVATKPKLKDK 103
BLAST of EWM26017.1 vs. NCBI_GenBank
Match: gi|442790976|gb|ELS00477.1| (ferredoxin [Xenococcus sp. PCC 7305]) HSP 1 Score: 74.7146 bits (182), Expect = 3.177e-14 Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 0
Query: 92 GSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGL--RSEYEADKILKGRKFGESEEYRLACQTTVERGEATVVVRPPKKGK 181
G+NLR+ +KID+Y L GK+TNC G GQCGTCVV++ L R+ +E K+ K + + YRLACQ TV G TV +P K K
Sbjct: 23 GANLRERALENKIDIYTLKGKLTNCGGYGQCGTCVVEIVEGMENLSPRTAFEQRKLKK-----KPDSYRLACQATVN-GSVTVATKPKLKDK 108
BLAST of EWM26017.1 vs. NCBI_GenBank
Match: gi|501375522|ref|WP_012407088.1| (iron ABC transporter substrate-binding protein [Nostoc punctiforme] >gi|186463261|gb|ACC79062.1| ferredoxin [Nostoc punctiforme PCC 73102]) HSP 1 Score: 73.559 bits (179), Expect = 6.201e-14 Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0
Query: 87 IEAKPGSNLRKTLQASKIDVYDLMGKMTNCNGAGQCGTCVVKVTSPSWGL--RSEYEADKILKGRKFGES-EEYRLACQTTVERGEATVVVRP 176
+ A G+NLR + ID+Y +GKMTNC G GQCGTC+V++ L R++ E RKF + E YRLACQT V G +VV +P
Sbjct: 13 VVAADGANLRLKAMQNDIDIYTFIGKMTNCGGNGQCGTCIVEIVEGLENLSPRTDVE------NRKFKKKPENYRLACQTLV-NGSVSVVTKP 98 The following BLAST results are available for this feature:
BLAST of EWM26017.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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