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Properties
| Property Name | Value |
|---|
| Product | Winged helix-turn-helix transcription repressor |
| Orig transcript id | gnl|cribi|Naga_100629g3.2829.mrna |
| Orig protein id | gnl|cribi|Naga_100629g3.2829 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:1157642..1158678 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4657 ID=rna4657|Name=rna4657|organism=Nannochloropsis gaditana|type=mRNA|length=453bp
CCTCCCTCCCTTCCTTCCTCCCTCCCTCGCCAAGGCTGGTGGCACCTGGT
CGTGAACCTGGAGGAGAGCCTGGCCATTACTCAAAACTACGTCTCGTTGT
CCAACCTCCCGCATGTCTTGAGCTTCCTAAGAGACACCCCCCATTTGATC
AGCGGGGTCCCGGAAGCCGAGCGGCCCTTGTTGTATGCACGCTTCAGAGA
GGCCTTGCGGGAATCCTATCCGCAGGTCCTCCAGGAGGCAGAAGGGAAGC
CAAGGGAGCGGGCGGGGGCGGAGAGGGAGGAAGGGAGGCAGGGATGGAGT
GCGGTGGTGGGGCGGACGCATTGTCGGGAGGAAGGAGGGGGGAAAGATAA
CACGGGCAAGCTGGGGCGAGAGGGGATGGGGACTCAGGGGCTTGGGAGCG
ATAGGCACGGGCAAGTCTCTTTCCAATTCGGATTTTTCTCGGACGTAGGC
TAG back to topprotein sequence of rna4657 >rna4657-protein ID=rna4657-protein|Name=rna4657|organism=Nannochloropsis gaditana|type=polypeptide|length=144bp
MRKAKPGMTPKVPTSSSYIASRPSSTVTSSSSASPPTDSQISSTILALTT
RRGPCRTICPSEVPRVLCPSNWRAYMPRVRAVAIRLAKEGLIDITQRGQV
VTVEKEGDIRGPIRLRTISDGNVCTQSQTSSKSSPAAGPEAVSS back to topmRNA from alignment at CM002463.1:1157642..1158678- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4657 ID=rna4657|Name=rna4657|organism=Nannochloropsis gaditana|type=mRNA|length=1037bp|location=Sequence derived from alignment at CM002463.1:1157642..1158678- (Nannochloropsis gaditana)
TTGCTTGTTTTAAAGATCTGAGAGCTGGACATACGCATTTCCTTTCCTTT
TAACCTCCTCTCCCCCCCTCCTCTCCCATCCCTAAACTTGCTCTTTCGGA
AGGCATGAGGAAAGCAAAACCCGGAATGACGCCCAAAGTTCCTACTTCAT
CCTCTTATATTGCATCCCGCCCCTCGTCCACGGTCACGTCCTCCTCCTCT
GCCTCACCACCAACCGACTCTCAGATTAGCAGCACCATTCTAGCGCTCAC
GACCAGGCGCGGTCCCTGTAGAACAATTTGTCCATCCGAAGTCCCTCGCG
TCCTGTGCCCCTCAAATTGGCGAGCATACATGCCTCGTGTGCGAGCGGTG
GCCATTCGCTTGGCCAAGGAGGGCCTCATTGACATTACACAGAGAGGACA
AGTGGTCACAGTGGAGAAGGAGGGGGACATACGAGGTCCCATTCGATTGC
GGACAATTTCCGATGGGAATGTTTGCACACAGAGCCAAACCTCTTCGAAA
AGCTCTCCAGCGGCAGGGCCGGAAGCTGTCTCTTCCTAAGTCGTGCACAT
AGTCGGAGAAATCATTTGCTTCAGAAACAGACAGTAACGTGATGCAAGTT
AGAAACAAAATAGCATTATTCTTTCTAAATTCGTCTAAAAATCATCTTAC
GAGTCCATCCAGCAATAAGTTCGACCACTTTACAATCTTTTGTCATGCCT
TGAATTCCATGGCGGTGTGTCTGGATACCGGTCTTTCGGACATAGGCGCG
TGTTTCCTTGTTCCAGGGTCGCGTCAAGCGCGCAAGACCTGAATGAGCCC
GAATACATTTATTAGGAAGCGATTCTGGGCTAACATAGTCGACCATAGCT
TTATGAGCGAAGGGGAAATGAACTGCCCAGCCCTTCATCACGTCAGAAGG
GATCCACTGTGGCAACATCGCTAGCCTACGTCCGAGAAAAATCCGAATTG
GAAAGAGACTTGCCCGTGCCTATCGCTCCCAAGCCCCTGAGTCCCCATCC
CCTCTCGCCCCAGCTTGCCCGTGTTATCTTTCCCCCC back to topCoding sequence (CDS) from alignment at CM002463.1:1157642..1158678- >rna4657 ID=rna4657|Name=rna4657|organism=Nannochloropsis gaditana|type=CDS|length=435bp|location=Sequence derived from alignment at CM002463.1:1157642..1158678- (Nannochloropsis gaditana)
ATGAGGAAAGCAAAACCCGGAATGACGCCCAAAGTTCCTACTTCATCCTC
TTATATTGCATCCCGCCCCTCGTCCACGGTCACGTCCTCCTCCTCTGCCT
CACCACCAACCGACTCTCAGATTAGCAGCACCATTCTAGCGCTCACGACC
AGGCGCGGTCCCTGTAGAACAATTTGTCCATCCGAAGTCCCTCGCGTCCT
GTGCCCCTCAAATTGGCGAGCATACATGCCTCGTGTGCGAGCGGTGGCCA
TTCGCTTGGCCAAGGAGGGCCTCATTGACATTACACAGAGAGGACAAGTG
GTCACAGTGGAGAAGGAGGGGGACATACGAGGTCCCATTCGATTGCGGAC
AATTTCCGATGGGAATGTTTGCACACAGAGCCAAACCTCTTCGAAAAGCT
CTCCAGCGGCAGGGCCGGAAGCTGTCTCTTCCTAA back to top
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