rna4653, rna4653 (mRNA) Nannochloropsis gaditana

Overview
Namerna4653
Unique Namerna4653
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length388
Alignment locationCM002463.1:1153994..1155095 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101534g2.10611.mrna
Orig protein idgnl|cribi|Naga_101534g2.10611
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1153994..1155095 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101534g2gene4490Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4653rna4653-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26031.1cds4641Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4653 ID=rna4653|Name=rna4653|organism=Nannochloropsis gaditana|type=mRNA|length=388bp
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCTGACTCCTTCCTTCCCTC
CTTTCTGAACTCCCTCAGTTGTTTACGCGGCCGACGCCTGGATGAGGAAA
GGGAAGGGAGGGAGGGCGTCTCCTCCCTCTACACCCCTCTCCTAGGTCTC
CTCCCCTCCCTCCGCCCCGCCCGCCCTCCCTCCCCCTCCTCCGACCTGAG
TGAGGAGGAACGGGCGCGGCAGGCGCGGGCAGAGGTCTTTCGGAACAGCC
TGATGGAGGAGGGGGGGCGGGAAGGAGGGCGGGAAGGAGGGCGGGAGGGA
GGGCGGGAGGGAGGGCGCCCCGGGGGTAAAGGGGAAGCGGAATGGATATG
TGTGGTTTGTGCATTCGAGAACCGGTGAGGGAGGAGGG
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protein sequence of rna4653

>rna4653-protein ID=rna4653-protein|Name=rna4653|organism=Nannochloropsis gaditana|type=polypeptide|length=149bp
MKDRVSTLRAWKAAIGFLVVSTAMLPIGAGAHPPIERHLSDSSIRPPATF
LRASHHKYTPTAVLSTPWQRLLLEDANCSTLASTCTSCLSLPPLREGEAC
VWCPGEGGCVASAACTDARDSCREGGRGGGREEGREGGRVAKRRSMGRE
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mRNA from alignment at CM002463.1:1153994..1155095-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4653 ID=rna4653|Name=rna4653|organism=Nannochloropsis gaditana|type=mRNA|length=1102bp|location=Sequence derived from alignment at CM002463.1:1153994..1155095- (Nannochloropsis gaditana)
AGGTCGCCCGTTTACTTCACCATTTCTTTTTCTACATCAGAGACAAACTC
AGCTAGCATGCACGATGCGAAGGGGTAAACAAGGACGTGGCCAGACGCAG
TAGCGGCATAGGTGGAATGAAGGACAGGGTTTCGACACTCAGAGCTTGGA
AAGCCGCCATAGGTACGTGAAAAGGATCATCAAAATGCACGACGCGTAAT
TATACCGTGGACTGTTTCCAATCGTGTCGTGTGGCGGGAGAGCAGGCTTT
TGTCTTCGGGACTCTGGAATGAGTACCCCTCGGCAAGCACCGTGCCCACC
TGCTGCTCGCCGCGCATCTCCCAGAGCTTCAAAGAGCTTTGATTCCTGAG
GAACGAGCTGACAATCTATATCAAACCCTCCAGCACTACCATTCTCTGCA
TTTGCTTACCCACAGTCCCTCCTCCCTCCTCCGTCTTTCACAGCAGGTTT
CCTGGTGGTTTCGACCGCCATGCTCCCCATAGGGGCAGGCGCTCACCCTC
CCATAGAGAGGCATCTTTCCGACTCCTCCATCCGCCCCCCTGCAACCTTC
CTCCGCGCAAGTCACCATAAATATACTCCCACTGCTGTGTTGTCGACACC
GTGGCAGCGGTTACTGCTTGGTGAGTGGCTTCTCAGCCTTTCTCCTTCCC
TCCCTCCCTCCCTCGCTACCTTCCTCCCTTGGTTCCGTCCCTACCTTCCC
ACTTCCCTCCACTTCTCCCTCCTGACCTTCATCTCATTTACCCCGCAGCC
TCTACTTCTCGCATCTACCCATTTCCGGTATATGTCATCTCCCTCAAGGG
CCCTCCCTCCCTCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCTTCCCTCTCTTATAGAAGACGCCAACTGTAGTACTCTCGCTTC
CACATGCACGAGCTGTCTCTCTCTGCCCCCCCTTCGAGAGGGGGAGGCTT
GTGTATGGTGCCCTGGGGAGGGGGGATGTGTGGCGAGCGCCGCCTGCACG
GACGCCCGCGATTCATGTAGGGAGGGAGGGAGGGGGGGAGGAAGGGAGGA
AGGGAGGGAGGGCGGGAGGGTGGCAAAGAGGCGGAGTATGGGGAGGGAAT
AG
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Coding sequence (CDS) from alignment at CM002463.1:1153994..1155095-

>rna4653 ID=rna4653|Name=rna4653|organism=Nannochloropsis gaditana|type=CDS|length=1350bp|location=Sequence derived from alignment at CM002463.1:1153994..1155095- (Nannochloropsis gaditana)
AAGACGCCAACTGTAGTACTCTCGCTTCCACATGCACGAGCTGTCTCTCT
CTGCCCCCCCTTCGAGAGGGGGAGGCTTGTGTATGGTGCCCTGGGGAGGG
GGGATGTGTGGCGAGCGCCGCCTGCACGGACGCCCGCGATTCATGTAGGG
AGGGAGGGAGGGGGGGAGGAAGGGAGGAAGGGAGGGAGGGCGGGAGGGTG
GCAAAGAGGCGGAGTATGGGGAGGGAATAGGTTTCCTGGTGGTTTCGACC
GCCATGCTCCCCATAGGGGCAGGCGCTCACCCTCCCATAGAGAGGCATCT
TTCCGACTCCTCCATCCGCCCCCCTGCAACCTTCCTCCGCGCAAGTCACC
ATAAATATACTCCCACTGCTGTGTTGTCGACACCGTGGCAGCGGTTACTG
CTTGATGAAGGACAGGGTTTCGACACTCAGAGCTTGGAAAGCCGCCATAG
AAGACGCCAACTGTAGTACTCTCGCTTCCACATGCACGAGCTGTCTCTCT
CTGCCCCCCCTTCGAGAGGGGGAGGCTTGTGTATGGTGCCCTGGGGAGGG
GGGATGTGTGGCGAGCGCCGCCTGCACGGACGCCCGCGATTCATGTAGGG
AGGGAGGGAGGGGGGGAGGAAGGGAGGAAGGGAGGGAGGGCGGGAGGGTG
GCAAAGAGGCGGAGTATGGGGAGGGAATAGGTTTCCTGGTGGTTTCGACC
GCCATGCTCCCCATAGGGGCAGGCGCTCACCCTCCCATAGAGAGGCATCT
TTCCGACTCCTCCATCCGCCCCCCTGCAACCTTCCTCCGCGCAAGTCACC
ATAAATATACTCCCACTGCTGTGTTGTCGACACCGTGGCAGCGGTTACTG
CTTGATGAAGGACAGGGTTTCGACACTCAGAGCTTGGAAAGCCGCCATAG
AAGACGCCAACTGTAGTACTCTCGCTTCCACATGCACGAGCTGTCTCTCT
CTGCCCCCCCTTCGAGAGGGGGAGGCTTGTGTATGGTGCCCTGGGGAGGG
GGGATGTGTGGCGAGCGCCGCCTGCACGGACGCCCGCGATTCATGTAGGG
AGGGAGGGAGGGGGGGAGGAAGGGAGGAAGGGAGGGAGGGCGGGAGGGTG
GCAAAGAGGCGGAGTATGGGGAGGGAATAGGTTTCCTGGTGGTTTCGACC
GCCATGCTCCCCATAGGGGCAGGCGCTCACCCTCCCATAGAGAGGCATCT
TTCCGACTCCTCCATCCGCCCCCCTGCAACCTTCCTCCGCGCAAGTCACC
ATAAATATACTCCCACTGCTGTGTTGTCGACACCGTGGCAGCGGTTACTG
CTTGATGAAGGACAGGGTTTCGACACTCAGAGCTTGGAAAGCCGCCATAG
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Synonyms
Publications