EWM26031.1, cds4641 (CDS) Nannochloropsis gaditana

Overview
NameEWM26031.1
Unique Namecds4641
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:1154934..1154979 -
Alignment locationCM002463.1:1154476..1154649 -
Alignment locationCM002463.1:1153994..1154223 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26031.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101534g2.10611.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1154934..1154979 -
CM002463.1supercontigCM002463.1:1154476..1154649 -
CM002463.1supercontigCM002463.1:1153994..1154223 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26031.1 vs. NCBI_GenBank
Match: gi|585107950|gb|EWM26031.1| (hypothetical protein Naga_101534g2 [Nannochloropsis gaditana])

HSP 1 Score: 300.056 bits (767), Expect = 5.067e-103
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 
Query:    1 MKDRVSTLRAWKAAIGFLVVSTAMLPIGAGAHPPIERHLSDSSIRPPATFLRASHHKYTPTAVLSTPWQRLLLEDANCSTLASTCTSCLSLPPLREGEACVWCPGEGGCVASAACTDARDSCREGGRGGGREEGREGGRVAKRRSMGRE 149
            MKDRVSTLRAWKAAIGFLVVSTAMLPIGAGAHPPIERHLSDSSIRPPATFLRASHHKYTPTAVLSTPWQRLLLEDANCSTLASTCTSCLSLPPLREGEACVWCPGEGGCVASAACTDARDSCREGGRGGGREEGREGGRVAKRRSMGRE
Sbjct:    1 MKDRVSTLRAWKAAIGFLVVSTAMLPIGAGAHPPIERHLSDSSIRPPATFLRASHHKYTPTAVLSTPWQRLLLEDANCSTLASTCTSCLSLPPLREGEACVWCPGEGGCVASAACTDARDSCREGGRGGGREEGREGGRVAKRRSMGRE 149
The following BLAST results are available for this feature:
BLAST of EWM26031.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107950|gb|EWM26031.1|5.067e-103100.00hypothetical protein Naga_101534g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4653rna4653Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications