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Properties
| Property Name | Value |
|---|
| Product | pre-mrna-processing-splicing factor |
| Orig transcript id | gnl|cribi|Naga_102481g1.5538.mrna |
| Orig protein id | gnl|cribi|Naga_102481g1.5538 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:1131712..1132435 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4644 ID=rna4644|Name=rna4644|organism=Nannochloropsis gaditana|type=mRNA|length=534bp
ATGCTCAACCTCCTCATCCACCGGAAGAATTTGAATTACCTGCACCTCGA
CTACAATTTTAATTTAAAACCGACCAAAACGTTAACCACCAAGGAACGGA
AGAAGAGCCGTTTCGGTAACGCCTTCCATTTGACCCGAGAAATCCTCCGA
CTAACCAAGCTGATTGTGGATTCCCACATCCAGTACCGTCTGGGCAATGT
GGACGCTTTCCAGCTTGCCGATGGTCTGCAATACACATTCGCGCACGTCG
GTCAGCTCACCGGCATGTACCGTTATAAATATCGGCTCATGCGCCAGATC
CGCATGTGTAAAGACTTAAAGCACGTGATCTACCACCGATTCAAAACGGG
ACCTGTGGGCAAGGGTCCCGGTTGTGGCTTTTGGGCACCCGGATGGCGAG
TCTGGCTTTACTTCCTTCGAGGTATTGTTCCTCTCCTAGAGCGCTGGTTG
GGGAATCTCTTGGCCCGTCAATTCGAGAGTCCCACTTTGACTTGGAGCTG
CGAGCCGCCGTTGTTGCTGATATATTGGACATGA back to topprotein sequence of rna4644 >rna4644-protein ID=rna4644-protein|Name=rna4644|organism=Nannochloropsis gaditana|type=polypeptide|length=97bp
MVAHGVSVFHLPLSPSLPPSLPPFLSSYVKQKADWWTDHAHYNRERIKRG
ATVDKTVCKKNLGRLTRLWLKAEQALIPSSHPFSPLLWPFLISGTTT back to topmRNA from alignment at CM002463.1:1131712..1132435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4644 ID=rna4644|Name=rna4644|organism=Nannochloropsis gaditana|type=mRNA|length=724bp|location=Sequence derived from alignment at CM002463.1:1131712..1132435+ (Nannochloropsis gaditana)
ATGGTAGCCCATGGCGTGTCCGTAtttcatctccctctttctccctccct
ccctccctccctccctccctttctctccagcTACGTAAAGCAGAAGGCAG
ACTGGTGGACCGATCACGCCCACTACAATCGAGAGCGTATCAAACGCGGC
GCCACGGTCAGTCTCTTGTCCCTGtattctctccctcccttcctccctcc
ctccctccctccctccctccctccctcggcaccGACGCacccttgtcctt
ctcatGTCCTGTGATTTTCTTACCGGAGGTGGCTTACCCTTCCATATCTT
GATCCCAATGGCTATGCAACAGGTGGATAAGACCGTGTGCAAGAAGAACC
TGGGGCGGTTGACGCGCTTGTGGCTGAAGGCCGAGCAGgtcgggaggacg
ggagggagggagggagggagggagggagggaagggatcaAGCACCAGCCA
GGGGGACGTTAGAAGACAGGGGAGGCGGTGATGaaacggaggaagacgtg
tcTGATATATGGACGCTATCTGTGCCGATGACCCCGTGttttttttcatt
tctcACTCGTGCCTGACTGTCTGCCCTCCTGATCATACCACTCATCCCTT
CatcccacccttttccctcccttcttttctcctttttgctCTCCTGACCA
AGGCActcatcccttcttcccaccctttttccccccttctttggCCCTTT
CTGATCTCAGGAACGACAACATAA back to topCoding sequence (CDS) from alignment at CM002463.1:1131712..1132435+ >rna4644 ID=rna4644|Name=rna4644|organism=Nannochloropsis gaditana|type=CDS|length=882bp|location=Sequence derived from alignment at CM002463.1:1131712..1132435+ (Nannochloropsis gaditana)
ATGGTAGCCCATGGCGTGTCCGTAtttcatctccctctttctccctccct
ccctccctccctccctccctttctctccagcTACGTAAAGCAGAAGGCAG
ACTGGTGGACCGATCACGCCCACTACAATCGAGAGCGTATCAAACGCGGC
GCCACGGTGGATAAGACCGTGTGCAAGAAGAACCTGGGGCGGTTGACGCG
CTTGTGGCTGAAGGCCGAGCAGGCActcatcccttcttcccacccttttt
ccccccttctttggCCCTTTCTGATCTCAGGAACGACAACATAAATGGTA
GCCCATGGCGTGTCCGTAtttcatctccctctttctccctccctccctcc
ctccctccctccctttctctccagcTACGTAAAGCAGAAGGCAGACTGGT
GGACCGATCACGCCCACTACAATCGAGAGCGTATCAAACGCGGCGCCACG
GTGGATAAGACCGTGTGCAAGAAGAACCTGGGGCGGTTGACGCGCTTGTG
GCTGAAGGCCGAGCAGGCActcatcccttcttcccaccctttttcccccc
ttctttggCCCTTTCTGATCTCAGGAACGACAACATAAATGGTAGCCCAT
GGCGTGTCCGTAtttcatctccctctttctccctccctccctccctccct
ccctccctttctctccagcTACGTAAAGCAGAAGGCAGACTGGTGGACCG
ATCACGCCCACTACAATCGAGAGCGTATCAAACGCGGCGCCACGGTGGAT
AAGACCGTGTGCAAGAAGAACCTGGGGCGGTTGACGCGCTTGTGGCTGAA
GGCCGAGCAGGCActcatcccttcttcccaccctttttccccccttcttt
ggCCCTTTCTGATCTCAGGAACGACAACATAA back to top
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