rna4638, rna4638 (mRNA) Nannochloropsis gaditana

Overview
Namerna4638
Unique Namerna4638
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length510
Alignment locationCM002463.1:1113417..1114042 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102764g1.5699.mrna
Orig protein idgnl|cribi|Naga_102764g1.5699
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1113417..1114042 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102764g1gene4474Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4638rna4638-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26047.1cds4626Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4638 ID=rna4638|Name=rna4638|organism=Nannochloropsis gaditana|type=mRNA|length=510bp
ATGCCACTTGCCCCAGGTATCGACCGTCTAAAAGTATTGCTTTGTTTAAG
TCTTCCGACAACTCCTTACAGGCACGGACTCGCTTGCTCTTTTGCTACAC
GATTTGTGACGAGTTTTTCATCCCATTCCTCCTTCGACGTGGACGTTTTG
GTATGCGGCGCTGAAGTTGTAGGACTGTCCATCGCCCGGGCATTGGCGAG
ATTCATAAAACCTTTCCCTCTGAACATATCGCATGATCCGTCATGCCTAG
GGCGGGACGGGAGGTCCTGGTGGTGGAGGCAGAGAAAAGCCCTGGGGGCT
CAGCCTTCGATGCGGTACAGTGAGCACATTTCATTTGTTCCTTCCATTCG
CGTCTCTGTTATGGCATTTTTCTGGACGTGTCTAGGAATGTACGACCCCC
CGAGGCTTCCTGAAAGCCGCCCCTCTGTGTACGAGGTCGACGCCCCCTGC
CTGCCTGTTGTGATGAATATGGAGGGCCCTACCACAGGTAGGACGGAGGG
AGGGAGGTAG
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protein sequence of rna4638

>rna4638-protein ID=rna4638-protein|Name=rna4638|organism=Nannochloropsis gaditana|type=polypeptide|length=90bp
MWRQVIDDPAAYLESSEPPSFFIQEKIQGKHLIFPPSHRLSRLVSAGMKE
QPQVKVWQLSTADYELEILAHYQEGTLSLGILIPLLPPIA
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mRNA from alignment at CM002463.1:1113417..1114042-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4638 ID=rna4638|Name=rna4638|organism=Nannochloropsis gaditana|type=mRNA|length=626bp|location=Sequence derived from alignment at CM002463.1:1113417..1114042- (Nannochloropsis gaditana)
ATGTGGAGGCAAGTGATTGACGACCCAGCGGCTTATTTAGAGTCCTCAGA
GCCTCCCTCCTTCTTCATTCAGGAGAAGGTAGGGAGGAAGGGAGGGGAGG
TGGGAGGGAGGGAGGGAGGGAGGGAGGAGGCAATACTTAAGAGGACGGGC
AGATCGGCCTAGGACTCAGAATAGCTCTTCTGGTTCCTTCCTCCTCCCTC
CCTCCTTCCTTCCCTCCCCCCTACCCTCCCTCTCTCCCTCCCTTCCCAGA
TCCAAGGGAAGCACCTCATATTCCCTCCCTCCCACCGTCTCTCTCGCTTG
GTTTCGGCGGGAATGAAGGAGCAGCCGCAGGTTAAGGTGTGGCAGCTGTC
GACGGCAGATTACGAGTTGGAAATCCTCGCACATTATCAGGTAGGGAGGG
AAGGGGGAATGGGAGAGAGGGAGGGAGGGAGGGGCGGAGCGAGAGGCGTT
TCATCTTTCAACATTCACCATCCTTCTGCCGCAAAAGGAATTAACATTTC
ACCCCAACCCCTCCCTCCCTCCCTCCCTCCCTTCCTCGCTCGGCTTCTTC
TTTCGCGCCATTTCTGTCTCTCAGGAGGGAACGTTATCCCTTGGAATACT
CATCCCTCTTCTCCCTCCCATTGCCC
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Coding sequence (CDS) from alignment at CM002463.1:1113417..1114042-

>rna4638 ID=rna4638|Name=rna4638|organism=Nannochloropsis gaditana|type=CDS|length=813bp|location=Sequence derived from alignment at CM002463.1:1113417..1114042- (Nannochloropsis gaditana)
GAGGGAACGTTATCCCTTGGAATACTCATCCCTCTTCTCCCTCCCATTGC
CCATCCAAGGGAAGCACCTCATATTCCCTCCCTCCCACCGTCTCTCTCGC
TTGGTTTCGGCGGGAATGAAGGAGCAGCCGCAGGTTAAGGTGTGGCAGCT
GTCGACGGCAGATTACGAGTTGGAAATCCTCGCACATTATCAGATGTGGA
GGCAAGTGATTGACGACCCAGCGGCTTATTTAGAGTCCTCAGAGCCTCCC
TCCTTCTTCATTCAGGAGAAGGAGGGAACGTTATCCCTTGGAATACTCAT
CCCTCTTCTCCCTCCCATTGCCCATCCAAGGGAAGCACCTCATATTCCCT
CCCTCCCACCGTCTCTCTCGCTTGGTTTCGGCGGGAATGAAGGAGCAGCC
GCAGGTTAAGGTGTGGCAGCTGTCGACGGCAGATTACGAGTTGGAAATCC
TCGCACATTATCAGATGTGGAGGCAAGTGATTGACGACCCAGCGGCTTAT
TTAGAGTCCTCAGAGCCTCCCTCCTTCTTCATTCAGGAGAAGGAGGGAAC
GTTATCCCTTGGAATACTCATCCCTCTTCTCCCTCCCATTGCCCATCCAA
GGGAAGCACCTCATATTCCCTCCCTCCCACCGTCTCTCTCGCTTGGTTTC
GGCGGGAATGAAGGAGCAGCCGCAGGTTAAGGTGTGGCAGCTGTCGACGG
CAGATTACGAGTTGGAAATCCTCGCACATTATCAGATGTGGAGGCAAGTG
ATTGACGACCCAGCGGCTTATTTAGAGTCCTCAGAGCCTCCCTCCTTCTT
CATTCAGGAGAAG
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Synonyms
Publications