EWM26047.1, cds4626 (CDS) Nannochloropsis gaditana

Overview
NameEWM26047.1
Unique Namecds4626
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:1113965..1114042 -
Alignment locationCM002463.1:1113653..1113793 -
Alignment locationCM002463.1:1113417..1113468 -

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Properties
Property NameValue
Start range1113417
Start range.
Protein idEWM26047.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102764g1.5699.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1113965..1114042 -
CM002463.1supercontigCM002463.1:1113653..1113793 -
CM002463.1supercontigCM002463.1:1113417..1113468 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26047.1 vs. NCBI_GenBank
Match: gi|585107991|gb|EWM26047.1| (hypothetical protein Naga_102764g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 182.57 bits (462), Expect = 2.047e-58
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 
Query:    1 MWRQVIDDPAAYLESSEPPSFFIQEKIQGKHLIFPPSHRLSRLVSAGMKEQPQVKVWQLSTADYELEILAHYQEGTLSLGILIPLLPPIA 90
            MWRQVIDDPAAYLESSEPPSFFIQEKIQGKHLIFPPSHRLSRLVSAGMKEQPQVKVWQLSTADYELEILAHYQEGTLSLGILIPLLPPIA
Sbjct:    1 MWRQVIDDPAAYLESSEPPSFFIQEKIQGKHLIFPPSHRLSRLVSAGMKEQPQVKVWQLSTADYELEILAHYQEGTLSLGILIPLLPPIA 90
The following BLAST results are available for this feature:
BLAST of EWM26047.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107991|gb|EWM26047.1|2.047e-58100.00hypothetical protein Naga_102764g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4638rna4638Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications