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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101254g1.5800.mrna |
| Orig protein id | gnl|cribi|Naga_101254g1.5800 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:1095545..1097063 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4627 ID=rna4627|Name=rna4627|organism=Nannochloropsis gaditana|type=mRNA|length=1637bp
TCTCTGTTGTACGCTTATGCATGTTCATGCCTCCACATTTGCCCCGAGGG
AGAGATGTTGAGACGCTCTGACAAAGACTCTCTTGGCGTCTTGATAATGT
TCGAGACAATCGACAAATGCAAAAACTGAGGGACAAAGGAGCAAAAATGT
GCCATCTTCCGACTTCATCCGCGGTCCATGTGCCATGCTTGGTTTTTAGT
ATGATTTATTTGATACCAGCGGCATTGTTATTGGTTTTTGTGATTATTAT
ATAGCCAAGATAAAGAGACATACGAAGGGCAAGGAAAAAGCAAACTACGT
ACTACGTATATATCCCTCTTTACGCAAAGTGAACCCCGAAAACTGACTCA
TTGCCCACAAAAACTGGCTTGAAAGGTCCGAACAACACGATACGACGCAG
TATGGAGGGCGAACAAGCGAAGGGAGAGGGATTAGTTTGGACATAGTGGG
TGGCATGTGCTCTTTTTTTTTTCCCCACCGGAGCAGGCAGCTACTCCGCC
ACAAGCCCCGTCGATCCTCACAACCACCTTTTCAATCATGAAAAACGTCG
TATCCATTTAAATCCTCATCATCCCTCTATGTTTGTATGAACACACGCAC
ACATGTCAATTATCGAGTGTCATGGTGGCGGTTTGACGCTTGTAAATATT
ATTTTTATAGCCCGATAGGCACCGTAGCCTGCTTCTCATGATGTTCCTAC
TTGACGTCGTAGTTGGTTTTTTAATCCTTTTTTTCAAGAAGCCACGCATT
TGTGCATGTTTGGGTTTGTTACTGTACGAATTGTGGCTCTGTCGTTTACA
TCGTAAAATGAGAGAGCATTTTCGCACCTGACGTCAATTCGATTAGGGTT
ATAATAGAGGCGACGGCCTCATTTCCCGTGTGATCAGAGGAGGTTTTGCC
TGTAAGGATTGTATTTTGACCCGAAACGCCGCTGTCCAAAGAGCATCGAC
TAGCTGATGTAAGAGAATGCTGCACGTTCCGTGGAAGCCAAAAAACTCTG
ATTTTTCAGGAGCTCTGGGAATCGATGGAGACAGGCAATAATGAGGAAAG
TGTTTCCTCCCAAAAACCTAGGCCGCGCGTCACACCAGCAATGTTTCGTC
ACCTCCTTATTCCTTTCCTTCCCTCTCCCTTCTGTACTCTATTTTTCTGT
GGCTCGATTAGTATGATGTCGGGACGCAAGGGTGTTCCGCAGCTGACTCA
TCGTCCTTCTCTTCACTCCCTCCCTCCCTCCCTCCCTCCCTCTTCCTTCC
CTACCTCCCTCATTCCTCACCCAGCCATCGATCCCGGCCATGCGCTTGGA
GCTCTTCTTCAAAACCGCTTCCGAGCTGCAGACGCTGATCGCCCTTGTGC
AAAGCGCCAATATCGGCGCCGTGAACCTGGTTAACAAAGCCAAGACGGAC
CCCCTCTTGCACTATGTCCGCACGTTGAAGCACGCTTTCCCTTCCTCTCC
TTCTTCTCCTTCCTCCCTTTCCTCCTCTTTGGATGTGGTGCCTCATTTCT
CCATCAAGTATCAGCACCAGGGGCGTGACACAGAGGCCACCTACGCCCAC
GTCAAGGTCCCTCCCTCCTTCCCTCACTCCCTCCCTCCCTCCCTCCTTCC
CTCCCTTCCTCCCTCCCTTCCTCCTCCCTCCCTCCTT back to topprotein sequence of rna4627 >rna4627-protein ID=rna4627-protein|Name=rna4627|organism=Nannochloropsis gaditana|type=polypeptide|length=125bp
MHGFHRRKLPLAISHAFFTHDPTSQVMRTAQRTAFGHVFASVIGMAALLA
STTLLAFPKSVTAFAVPAGAWGMRLAPAPVAVSATYVRRMGSMAMVAPET
VVQDVIKKPAVIFRWEGREGVGREG back to topmRNA from alignment at CM002463.1:1095545..1097063+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4627 ID=rna4627|Name=rna4627|organism=Nannochloropsis gaditana|type=mRNA|length=1519bp|location=Sequence derived from alignment at CM002463.1:1095545..1097063+ (Nannochloropsis gaditana)
GTGGCGGAGTAGCTGCCTGCTCcggtggggaaaaaaaaaagagcaCATGC
CACCCACTATGTCCAAACtaatccctctcccttcgcttGTTCGCCCTCCA
TACTGCGTCGTATCGTGTTGTTCGGACCTTTCAAGCCAGTTTTTGTGGGC
AATGAGTCAGTTTTCGGGGTTCACTTTGCGTAAAGAGGGATATATACGTA
GTACGTAGTTTGCtttttccttgcccttcGTATGTCTCTTTATCTTGGCT
ATATAATAATCACAAAAACCAATAACAATGCCGCTGGTATCAAATAAATC
ATACTAAAAACCAAGCATGGCACATGGACCGCGGATGAAGTCGGAAGATG
GCACATTTTTGCTCCTTTGTCCCTCAGTTTTTGCATTTGTCGATTGTCTC
GAACATTATCAAGACGCCAAGAGAGTCTTTGTCAGAGCGTCTCAACATCT
CTCCCTCGGGGCAAATGTGGAGGCATGAACATGCATAAGCGTACAACAGA
GATCCAAACGCACGCGTACATGATTTTGGGGTACCGACGGATCTGTGTCA
TCGAGTTTCAGAGTATCGAAGGGGGAGGATAGGGTCTGCTCGCCGCGTcg
accttcctctccacaaTATTTATGTCGCATGCATGGATTTCACCGGAGGA
AACTCCCGCTTGCCATCTCCCACGCCTTCTTTACACATGATCCAACCTCT
CAGGTCATGCGCACCGCCCAACGCACTGCATTTGGTCACGTCTTCGCCTC
TGTCATCGGTATGGCAGCTCTgttggcctccaccaccctcctcgcttttc
ccaAATCCGTCACCGCCTTTGCCGTCCCTGCAGGGGCATGGGGAATGGTG
CGTGCATTGCGATGGCATGTGACTTTTGGGGGAGGGATTGCTCTGGCACC
CAGCTTTGCCTCAATGATGAGCTTTTCTGGATGTCAATATACCCCCACGG
GGTCCGCTTGGTCCCGCAACGCCACCCCGAATTTTCCCATTTTCTCCCCA
TTCTCCTCGAAATCGTCGGCTTGCCTCGACTTATCTCACATGAGTGCGTG
ACATGGCACGCACATGCCTTCACAGCGCCTCGCCCCGGCTCCCGTCGCGG
TCTCAGCGACGTACGTTCGACGCATGGGGAGCATGGCCATGGtaacagag
ggagggagggagggagggagggagggaggatgggaagggaggagggaaag
aaggaagggtgaaaaggaggaaagaggacatcgagggcgaggggaacCAC
GAGCTTTCTCCTTGTTTTTCACTTTGGGTCCCTAATCCATCATATTCCCC
CCATTCATCCTCTTGAGAGGCCACCGGGTCCCTAATCCATCATGTCCCCC
CGTCATCCTCTTGGGAGGCCAACGGGCCCTAATCCATCATatccctcccc
gtcatcctcatcaTCGCAATCTCTCCGCAGGTGGCACCGGAAACGGTCGT
ACAAGACGTCATCAAGAAGCCCGCTGTCATTTtcaggtgggaagggaggg
agggggttgggagggaggg back to topCoding sequence (CDS) from alignment at CM002463.1:1095545..1097063+ >rna4627 ID=rna4627|Name=rna4627|organism=Nannochloropsis gaditana|type=CDS|length=1122bp|location=Sequence derived from alignment at CM002463.1:1095545..1097063+ (Nannochloropsis gaditana)
ATGCATGGATTTCACCGGAGGAAACTCCCGCTTGCCATCTCCCACGCCTT
CTTTACACATGATCCAACCTCTCAGGTCATGCGCACCGCCCAACGCACTG
CATTTGGTCACGTCTTCGCCTCTGTCATCGGTATGGCAGCTCTgttggcc
tccaccaccctcctcgcttttcccaAATCCGTCACCGCCTTTGCCGTCCC
TGCAGGGGCATGGGGAATGCGCCTCGCCCCGGCTCCCGTCGCGGTCTCAG
CGACGTACGTTCGACGCATGGGGAGCATGGCCATGGTGGCACCGGAAACG
GTCGTACAAGACGTCATCAAGAAGCCCGCTGTCATTTtcaggtgggaagg
gagggagggggttgggagggagggATGCATGGATTTCACCGGAGGAAACT
CCCGCTTGCCATCTCCCACGCCTTCTTTACACATGATCCAACCTCTCAGG
TCATGCGCACCGCCCAACGCACTGCATTTGGTCACGTCTTCGCCTCTGTC
ATCGGTATGGCAGCTCTgttggcctccaccaccctcctcgcttttcccaA
ATCCGTCACCGCCTTTGCCGTCCCTGCAGGGGCATGGGGAATGCGCCTCG
CCCCGGCTCCCGTCGCGGTCTCAGCGACGTACGTTCGACGCATGGGGAGC
ATGGCCATGGTGGCACCGGAAACGGTCGTACAAGACGTCATCAAGAAGCC
CGCTGTCATTTtcaggtgggaagggagggagggggttgggagggagggAT
GCATGGATTTCACCGGAGGAAACTCCCGCTTGCCATCTCCCACGCCTTCT
TTACACATGATCCAACCTCTCAGGTCATGCGCACCGCCCAACGCACTGCA
TTTGGTCACGTCTTCGCCTCTGTCATCGGTATGGCAGCTCTgttggcctc
caccaccctcctcgcttttcccaAATCCGTCACCGCCTTTGCCGTCCCTG
CAGGGGCATGGGGAATGCGCCTCGCCCCGGCTCCCGTCGCGGTCTCAGCG
ACGTACGTTCGACGCATGGGGAGCATGGCCATGGTGGCACCGGAAACGGT
CGTACAAGACGTCATCAAGAAGCCCGCTGTCATTTtcaggtgggaaggga
gggagggggttgggagggaggg back to top
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