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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101648g1.3223.mrna |
| Orig protein id | gnl|cribi|Naga_101648g1.3223 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:1092694..1093438 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4625 ID=rna4625|Name=rna4625|organism=Nannochloropsis gaditana|type=mRNA|length=2110bp
ATAACAGGCTACCATGCGCGCCAGTATCACAATTGCCGGCTTTTTGGCCG
TGCTGGTGTCAACAGCTTCCGCCTACCGTGCTCCTCAGGCGAGGAACAGT
TGTCTCAAGACATGCTTGGTCCCGTACGGGACCAATGCGACCCGGACTAT
CAAGACGATATGCCGACGTGCCTGTAAAGTAGCCGCCCCCCTGCGTGGAT
CCTGCCGCAAAACCACAAACACCTTCTGGCGGAACCAGACCAAGGTCTGC
CGTCAAAGCATCCGGCGGATCAAGCAAGGCCTCCCTCCTCTCACGTCGTT
GGTTTCCCACACGACCCCGGCCAATGCTTCCTCCGATATCCCCACGGTGA
CCCAGTACACCTACGAAGCCACCTGCCTGAAAGAAATCAAATTCGAATGG
AAGGACGCCAAACAGACGTGCCGGGAGATCCTCTGCCCGGACGGGCAGTA
CTGGAACGTGGAGGCGGACGCGTGCGTGGTCAACACCTTTGTGAACCTGT
CCGTCTTGGAGACCTCAGGGGCTTTGGATCCGGCGTTCCTCCGCGGATTT
TACAAAATGTCTTGGAAGGGCACCGACCCTTACCAAGGCCCAGACGACAC
CAACGTCGGGGTGACCTTCACGGGCCGTTTGCCGGGCGATCCCCAGGCGA
ACATCGCGCCCATGACCTCGGACGCGATCAATTTGTTGTCCTACGGCGGG
GGCAATGAGTTTGGGGCGTGGAGCGTGGCGGCGGTGGAGGCCGTCGGCTC
GGAATCCAATTTGAACGAGGTCATCTCGCTAAAATACGACGGGATCGTGA
TCGACGCGGAGGAGTATGCCTCAGGCCAATCCGTCACCGTGGAAGAGTGG
AACACAATGTTCGCCGCCATCAAGGCCAAAAACCTGATGCTCATAGTCAC
CACCTCCCACTTCTCCCCCTACGGCATGTCCAACGGCGCGGCCCTGATCG
CCGACTGGCTCTCCAATCCCAACATCGACTACCTCTCCCCTCAGCTCTAC
ACCAGTGGAACGGAGCCTCAGAACGACTGGGTGGGATTCAGCGCCGCCTG
GACGACGGCCTCCACCCCCATTGCCCCTTCCATTGTCCAAGCTTCCTACT
ACGACCAACTCGGGGAGAATTCCGTGACCGTCTACCTGCCCAACGCGAAG
GGGTACCTGGTGTGGAGCAACACCCCTCCGCCCCAGCCAGGCCCCACCCC
GTCCTGTGTCAGCGGTTACTTCCCGGTACGTGCCCGACGGCCTCACTTTT
CGATACAATGATGATGCTATATAATGTTCCCCTATGAAGCTGTGCTTGTC
CGTGTCGAATCATATTCCTTCCCCTCATCCCCCCCCTCTTCTTCTCCCAG
GGAAGCGGCTGTGCTTACATGTGCGAATGGTGCGCCCAGCAGCTTCAAAC
CGACAACTATTACTGGAAAAGCGGTGTCTGTACCTACCAAGCTGGCACGG
GCTGTGTGGGCTCCCCCCAGGCGGGCGTGGAATACACGTGCTGCAAGGCC
GGATCCTCGTAAATGGAAGGTTCTGGAAGCTTGGTCGCTGGGGCTCGTCG
CGCGCAGTCTTGGGCAGTGTGGTGGACTTGCTTGCGATGTGCCGGGCGAC
GTTGAGGCCTTGTTTTTAATTGAGTAGAGAGGAGATATTTGATAGAATGT
TAGAAAAGCCCAACCCTCGACCTGGACAAATTATTGTTCGAGTGTACGGT
TGGAAAAGGAGGCTTCAAGGGAAGGAGAGAGGAGGACGGTAGCATCTCCT
TGCCCCTGAACGGATGGCCCCATGCTAAGGAAAACTGTCGTGGAACAGAA
GGCGCGAACCTGAGAGACACAAGAACACCGTGATTGAGTCTTAATTTAAT
AATCCGGGCGGTGGAAGAGGGAACAGGCAGTAGGATTGAACCCCCACGGC
GGCTACAGTGTCGGGCACGGGCGCTGTCACGGACAGGGGAGGGAAACATC
GAGCCTACCGCCCTAGATACTTTCATCCATAACCCTATCCATATATGTAA
CCCCAACCTTCATCCTTTTCGGGTGGCCGTTCTCCCCAAAAAGCACGGTG
CCGTCGACCCCGGTTCAGGTCCCAAAGAAGATTAAAAAATTAATATATAT
ATCAGAACCC back to topprotein sequence of rna4625 >rna4625-protein ID=rna4625-protein|Name=rna4625|organism=Nannochloropsis gaditana|type=polypeptide|length=140bp
MMTLHSHFVTLCPHTETHFTPKNPVDMTLRWCPTHTHSVAVVVVFLLFVV
GLRAQITIPLTYKSQPPASSTPASLADKKMRYNFIKTSTDAGLLGGIWSS
MVVEEQLDYVAILDPFTNGVKQASASIALRRESGSTGRRE back to topmRNA from alignment at CM002463.1:1092694..1093438+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4625 ID=rna4625|Name=rna4625|organism=Nannochloropsis gaditana|type=mRNA|length=745bp|location=Sequence derived from alignment at CM002463.1:1092694..1093438+ (Nannochloropsis gaditana)
ATGATGACGCTGCACTCACATTTTGTTACCCTCTGCCCACATACAGAGAC
CCATTTCACCCCGAAAAACCCTGTCGACATGACCTTGCGATGGTGTCCCA
CCCACACTCAttcggtggcggtggtggtggtgtttTTGTTGTTTGTGGTG
GGTTTGCGGGCGCAAATTACCATTCCGCTGACGTACAAGTCTCAACCTCC
AGCATCATCGACAcctgcctccttggcggATAAAAAAATGCGCTACAATT
TCATCAAAACCAGCACAGACGCAGGCCTTCTCGGGGGCATATGGTCGagc
atggtggtggaggagcaggtaAGGTGGAGGGTTACAACACTTGTCTTTTT
GAGgggtgacaaggaggaaggagaaacatACACCCGTCAATCTCAAGCTG
CCTATGAAAATTTTCCACACTGTGTGACTTTCAGATATATGTCTTATTTT
CTAGACCATGATATGTTGTGCAGTTGCAACAGAAGAAATCTTTTTTCCAT
GGCAGCAACGCATAAATCATTcccggcccctctcttcctcccaccctccc
tccatccatccctccctccctccctccttgcctccctcagctTGACTATG
TGGCCATCCTCGATCCCTTCACCAATGGCGTGAAGCAAGCCTCGGCCTCC
ATCGCTCGTTTGGAAGCGCTAAATCCTCAGATATGGGCCTATTTTGCCTC
TTTGAAGTTCGGAGGGAATCAGGTagcacaggaaggagggagtga back to topCoding sequence (CDS) from alignment at CM002463.1:1092694..1093438+ >rna4625 ID=rna4625|Name=rna4625|organism=Nannochloropsis gaditana|type=CDS|length=1269bp|location=Sequence derived from alignment at CM002463.1:1092694..1093438+ (Nannochloropsis gaditana)
ATGATGACGCTGCACTCACATTTTGTTACCCTCTGCCCACATACAGAGAC
CCATTTCACCCCGAAAAACCCTGTCGACATGACCTTGCGATGGTGTCCCA
CCCACACTCAttcggtggcggtggtggtggtgtttTTGTTGTTTGTGGTG
GGTTTGCGGGCGCAAATTACCATTCCGCTGACGTACAAGTCTCAACCTCC
AGCATCATCGACAcctgcctccttggcggATAAAAAAATGCGCTACAATT
TCATCAAAACCAGCACAGACGCAGGCCTTCTCGGGGGCATATGGTCGagc
atggtggtggaggagcagctTGACTATGTGGCCATCCTCGATCCCTTCAC
CAATGGCGTGAAGCAAGCCTCGGCCTCCATCGCTCTTCGGAGGGAATCAG
GTagcacaggaaggagggagtgaATGATGACGCTGCACTCACATTTTGTT
ACCCTCTGCCCACATACAGAGACCCATTTCACCCCGAAAAACCCTGTCGA
CATGACCTTGCGATGGTGTCCCACCCACACTCAttcggtggcggtggtgg
tggtgtttTTGTTGTTTGTGGTGGGTTTGCGGGCGCAAATTACCATTCCG
CTGACGTACAAGTCTCAACCTCCAGCATCATCGACAcctgcctccttggc
ggATAAAAAAATGCGCTACAATTTCATCAAAACCAGCACAGACGCAGGCC
TTCTCGGGGGCATATGGTCGagcatggtggtggaggagcagctTGACTAT
GTGGCCATCCTCGATCCCTTCACCAATGGCGTGAAGCAAGCCTCGGCCTC
CATCGCTCTTCGGAGGGAATCAGGTagcacaggaaggagggagtgaATGA
TGACGCTGCACTCACATTTTGTTACCCTCTGCCCACATACAGAGACCCAT
TTCACCCCGAAAAACCCTGTCGACATGACCTTGCGATGGTGTCCCACCCA
CACTCAttcggtggcggtggtggtggtgtttTTGTTGTTTGTGGTGGGTT
TGCGGGCGCAAATTACCATTCCGCTGACGTACAAGTCTCAACCTCCAGCA
TCATCGACAcctgcctccttggcggATAAAAAAATGCGCTACAATTTCAT
CAAAACCAGCACAGACGCAGGCCTTCTCGGGGGCATATGGTCGagcatgg
tggtggaggagcagctTGACTATGTGGCCATCCTCGATCCCTTCACCAAT
GGCGTGAAGCAAGCCTCGGCCTCCATCGCTCTTCGGAGGGAATCAGGTag
cacaggaaggagggagtga back to top
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