EWM26060.1, cds4613 (CDS) Nannochloropsis gaditana

Overview
NameEWM26060.1
Unique Namecds4613
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:1092694..1093011 +
Alignment locationCM002463.1:1093284..1093350 +
Alignment locationCM002463.1:1093401..1093438 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26060.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101648g1.3223.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1092694..1093011 +
CM002463.1supercontigCM002463.1:1093284..1093350 +
CM002463.1supercontigCM002463.1:1093401..1093438 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM26060.1 vs. NCBI_GenBank
Match: gi|585108018|gb|EWM26060.1| (hypothetical protein Naga_101648g1 [Nannochloropsis gaditana])

HSP 1 Score: 291.967 bits (746), Expect = 3.597e-100
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 
Query:    1 MMTLHSHFVTLCPHTETHFTPKNPVDMTLRWCPTHTHSVAVVVVFLLFVVGLRAQITIPLTYKSQPPASSTPASLADKKMRYNFIKTSTDAGLLGGIWSSMVVEEQLDYVAILDPFTNGVKQASASIALRRESGSTGRRE 140
            MMTLHSHFVTLCPHTETHFTPKNPVDMTLRWCPTHTHSVAVVVVFLLFVVGLRAQITIPLTYKSQPPASSTPASLADKKMRYNFIKTSTDAGLLGGIWSSMVVEEQLDYVAILDPFTNGVKQASASIALRRESGSTGRRE
Sbjct:    1 MMTLHSHFVTLCPHTETHFTPKNPVDMTLRWCPTHTHSVAVVVVFLLFVVGLRAQITIPLTYKSQPPASSTPASLADKKMRYNFIKTSTDAGLLGGIWSSMVVEEQLDYVAILDPFTNGVKQASASIALRRESGSTGRRE 140
The following BLAST results are available for this feature:
BLAST of EWM26060.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108018|gb|EWM26060.1|3.597e-100100.00hypothetical protein Naga_101648g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4625rna4625Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications