|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101333g1.1406.mrna |
| Orig protein id | gnl|cribi|Naga_101333g1.1406 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:1073908..1074585 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4619 ID=rna4619|Name=rna4619|organism=Nannochloropsis gaditana|type=mRNA|length=1827bp
CGCAGATCCCCAACAGCACCGGCACCGGCGGGTCCAGCACCTCCGAAGCC
GCCGTACAAGCCGTCTTGAACGCCTGCGACATCCTCCTCGCACGATTACA
GCCCTTCCTTCCCCCCCGGGACCCTACCCCGACCTCCCCCCCGCCCTCCC
CCCCGACCTGGTCCGCAGCCGTTCAAGCCGCCGCGGCCGAGGGAGTGAAC
CTGGCGGCGGAAGGATGGTTCGCTCCTCCCACCGATCGAGGTGCACCCTT
TGACTATTTCGTTTACTGCGGTGCTTTCTCCGAAGTCGAGCTGGATCTAT
TGACGGGCGAGGTGACGGTTGTGGCTTCTACCATTGTGTACGACGCAGGC
CGGAGTTTGAACCCGCAGGTGCGCCTCTTTTTCCCGCGCGCCCTTTCTCC
CTTTTCCCCCCCCTCCCTCTTTTGCTGCCTGCCTTGTGCGGTCACATTCT
GAAGACTTGATTCCTCATCGGTCCCTTTGGCGAGTTCCACGGGAAGGAAA
GCAATGTCCTGGGACTCGTCGTGTTCGCATGATGGAGGGTCCGAGAAGCG
AATCTTTTCAGATTCTTGTGACGCATCTTTCCCTATCCTTCCCTCCCCGG
CAGGTGGACATTGGGCAGATCGAAGGTGCTTTCGTGCAGGGCCTCGGGTA
CTATTTGACGGAGGAGGTGGAATTCGACCCGGAGGGGCGCTTGCTTACGA
ATGGCACCTGGCACTACAAACCCCCAGGGGTCAATGACATCCCCCTTCAC
TTCCACGTAAGCCTCCTCCCTCCTCCCTCGGCAGGGACGCGCGAGCAGAG
GAGGTCAAGGACGAAAGTAGAAAAAGTAGGACAAGGAGAGGAAAAGAAGG
AAAAGGAAGGATTGATTTTGAGCAGCAAAGCCACAGGAGAACCGCCTTTC
ATGCTGGCGAGCTCCGCATATTTTGGCGTGGTTGCTGCGATTCGGGAAGG
GAAGCGGGAGTGGGGGCAGGGAGGGAAACGCACAAGCGGGGAGACGTTGG
TAAAAGAGGTGCCGTTGGCGATTTCGGCGACGATCAAGAAGAGAATCGAG
GCGATCGATGTGCCTGTGGAAGCGTTCGTGCTGTAGGAGAGGCGGGAACA
GGAGAAAAGAGTGAAGGGGAGGAGACGGAGTTGGTAGTACCTTGGTGGTC
GTCATGTAGCTGTCAAACCACACCACGCACAAGAAGAGGAGAAAACTGCG
GAGGCATAGTTGGCATGAGGTTGCAATGGATGGAATATATCGTACCACGC
ATCACATGAATGTGGGGAGACCATAGACTGGTTTGCAGATTAAAAACACC
CTTCTCTTGTCTGCAATTAAGACGGGGCACTGAAGAGAAGAATTGCTTTG
AGGGAAGGAGATGGGATGTGGGGATGGCTGCAGCCATAGAGTAGCCCTAT
ATACACTTGGCAAGAAGCATAAGAATATCAGATGTTACGGGCGTTTGGGT
TGTGATATCAACCAATTTGTGAGGGCGTATTATGTACAATTTGGTGGTAC
GCTTTTGTATTTTCCCCAGAATTCCTGATATCGTCTTATGGATGTGTCGA
TCGGGATGTAAAACGGCTTCTTCCATGAACGCCAGAAAATAGATTGCAAG
CGAGCGTGGCACTTTGAAACCAACGAAACTTGACAGCGTGACTCTTACGT
CTATTTCTACCGCACGTTAAACGTGAGGGGATGAACAAAGTCAATTTTGG
AGGCGATTAGGTGCGCCGTGCGTGCACTCCATCGTGGTGGTGGTTAATAG
GCGGATGGATACATAGAGATAAGTTTTCCTTTGCGCTCATATATTCACAT
ATATATATATTATGATGTACTCTATAT back to topprotein sequence of rna4619 >rna4619-protein ID=rna4619-protein|Name=rna4619|organism=Nannochloropsis gaditana|type=polypeptide|length=139bp
MLRWCDEQGWKLSPGQGITACFSQSIFGLGPVLFFAVAGLYQYVLFSRED
EAASRRPFHDKRLKDKTKTVKLLLSVLLVSIPLARVLVAVGTQSHGLYSV
AFFFSNVVTSMAWCGCLGVLSLPGSPDVIPRQSCGAWGS back to topmRNA from alignment at CM002463.1:1073908..1074585+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4619 ID=rna4619|Name=rna4619|organism=Nannochloropsis gaditana|type=mRNA|length=678bp|location=Sequence derived from alignment at CM002463.1:1073908..1074585+ (Nannochloropsis gaditana)
ATGCTGCGCTGGTGTGATGAACAGGGTTGGAAACTAAGTCCTGGACAAGG
TGCGTCtcgtgggggagaaaggtTGGCCTTCGAGATGATTTTCTGGGACT
ATTTAGGTGCTAGTATCAtcacttttccctcctcggtTGAGTttgctcct
ctccttttccggCCCCTGTTGGCTTGACACGCGTCCATATGCTCCTAATC
ACAGGCATTACCGCATGCTTCTCCCAGTCTATATTTGGCTTGGGTCCTGT
ACTATTTTTTGCCGTCGCCGGACTGTATCAATACGTCCTTTTTtcaaggg
aggacgaggctgcAAGTCGGAGACCGTTCCACGACAAACGCCTGAAAGAC
AAGACGAAGACTGTCAAGCTGCTTCTATCGGTCCTGCTAGTCTCGATCCC
TTTGGCGCGTGTCCTGGTGGCAGTTGGCACGCAGAGCCATGGCTTGTACT
CcgttgctttcttcttcagcaaTGTCGTCACCTCGATGGCATGGTGTGGT
TGTTTAGGTGTCCTGGTCTGGGAAAAAACGTGCCAAGAAGAGACTGCATA
CCACCCTTGGCCTCTACTTAGTTTTTGGGTCTTGTCCTTGATCAGCGACG
CTTTTATTGTCTCTGCAGTCTCTCCCGGGATCACCAGACGTCATCCCTCG
CCAGTCCTGTGGAGCCTGGGGGTCTTAA back to topCoding sequence (CDS) from alignment at CM002463.1:1073908..1074585+ >rna4619 ID=rna4619|Name=rna4619|organism=Nannochloropsis gaditana|type=CDS|length=1260bp|location=Sequence derived from alignment at CM002463.1:1073908..1074585+ (Nannochloropsis gaditana)
ATGCTGCGCTGGTGTGATGAACAGGGTTGGAAACTAAGTCCTGGACAAGG
CATTACCGCATGCTTCTCCCAGTCTATATTTGGCTTGGGTCCTGTACTAT
TTTTTGCCGTCGCCGGACTGTATCAATACGTCCTTTTTtcaagggaggac
gaggctgcAAGTCGGAGACCGTTCCACGACAAACGCCTGAAAGACAAGAC
GAAGACTGTCAAGCTGCTTCTATCGGTCCTGCTAGTCTCGATCCCTTTGG
CGCGTGTCCTGGTGGCAGTTGGCACGCAGAGCCATGGCTTGTACTCcgtt
gctttcttcttcagcaaTGTCGTCACCTCGATGGCATGGTGTGGTTGTTT
AGGTGTCCTGTCTCTCCCGGGATCACCAGACGTCATCCCTCGCCAGTCCT
GTGGAGCCTGGGGGTCTTAAATGCTGCGCTGGTGTGATGAACAGGGTTGG
AAACTAAGTCCTGGACAAGGCATTACCGCATGCTTCTCCCAGTCTATATT
TGGCTTGGGTCCTGTACTATTTTTTGCCGTCGCCGGACTGTATCAATACG
TCCTTTTTtcaagggaggacgaggctgcAAGTCGGAGACCGTTCCACGAC
AAACGCCTGAAAGACAAGACGAAGACTGTCAAGCTGCTTCTATCGGTCCT
GCTAGTCTCGATCCCTTTGGCGCGTGTCCTGGTGGCAGTTGGCACGCAGA
GCCATGGCTTGTACTCcgttgctttcttcttcagcaaTGTCGTCACCTCG
ATGGCATGGTGTGGTTGTTTAGGTGTCCTGTCTCTCCCGGGATCACCAGA
CGTCATCCCTCGCCAGTCCTGTGGAGCCTGGGGGTCTTAAATGCTGCGCT
GGTGTGATGAACAGGGTTGGAAACTAAGTCCTGGACAAGGCATTACCGCA
TGCTTCTCCCAGTCTATATTTGGCTTGGGTCCTGTACTATTTTTTGCCGT
CGCCGGACTGTATCAATACGTCCTTTTTtcaagggaggacgaggctgcAA
GTCGGAGACCGTTCCACGACAAACGCCTGAAAGACAAGACGAAGACTGTC
AAGCTGCTTCTATCGGTCCTGCTAGTCTCGATCCCTTTGGCGCGTGTCCT
GGTGGCAGTTGGCACGCAGAGCCATGGCTTGTACTCcgttgctttcttct
tcagcaaTGTCGTCACCTCGATGGCATGGTGTGGTTGTTTAGGTGTCCTG
TCTCTCCCGGGATCACCAGACGTCATCCCTCGCCAGTCCTGTGGAGCCTG
GGGGTCTTAA back to top
|