EWM26066.1, cds4607 (CDS) Nannochloropsis gaditana

Overview
NameEWM26066.1
Unique Namecds4607
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:1073908..1073956 +
Alignment locationCM002463.1:1074112..1074422 +
Alignment locationCM002463.1:1074526..1074585 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26066.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101333g1.1406.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1073908..1073956 +
CM002463.1supercontigCM002463.1:1074112..1074422 +
CM002463.1supercontigCM002463.1:1074526..1074585 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM26066.1 vs. NCBI_GenBank
Match: gi|585108035|gb|EWM26066.1| (hypothetical protein Naga_101333g1 [Nannochloropsis gaditana])

HSP 1 Score: 283.108 bits (723), Expect = 1.149e-96
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 
Query:    1 MLRWCDEQGWKLSPGQGITACFSQSIFGLGPVLFFAVAGLYQYVLFSREDEAASRRPFHDKRLKDKTKTVKLLLSVLLVSIPLARVLVAVGTQSHGLYSVAFFFSNVVTSMAWCGCLGVLSLPGSPDVIPRQSCGAWGS 139
            MLRWCDEQGWKLSPGQGITACFSQSIFGLGPVLFFAVAGLYQYVLFSREDEAASRRPFHDKRLKDKTKTVKLLLSVLLVSIPLARVLVAVGTQSHGLYSVAFFFSNVVTSMAWCGCLGVLSLPGSPDVIPRQSCGAWGS
Sbjct:    1 MLRWCDEQGWKLSPGQGITACFSQSIFGLGPVLFFAVAGLYQYVLFSREDEAASRRPFHDKRLKDKTKTVKLLLSVLLVSIPLARVLVAVGTQSHGLYSVAFFFSNVVTSMAWCGCLGVLSLPGSPDVIPRQSCGAWGS 139
The following BLAST results are available for this feature:
BLAST of EWM26066.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108035|gb|EWM26066.1|1.149e-96100.00hypothetical protein Naga_101333g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4619rna4619Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications