rna4614, rna4614 (mRNA) Nannochloropsis gaditana

Overview
Namerna4614
Unique Namerna4614
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1569
Alignment locationCM002463.1:1051077..1052695 -

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Properties
Property NameValue
ProductRibosomal protein L7/L12
Orig transcript idgnl|cribi|Naga_100278g1.6827.mrna
Orig protein idgnl|cribi|Naga_100278g1.6827
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1051077..1052695 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100278g1gene4450Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4614rna4614-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26076.1cds4602Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4614 ID=rna4614|Name=rna4614|organism=Nannochloropsis gaditana|type=mRNA|length=1569bp
TCGACGAGAAAAATGTAAGCGGCCGTATTATCGCATCCACACCCGCTCTA
AGCCGCTGAAAGAGCTCCTAATTCTCTTTTTTTGACATTCCAAAAGGTTC
GGTGGGGGAACTTTTAGGGACCTCGAGGAGTTCATACTCCACAGGATTTT
GGTTGTCCCGACACTAGCCATTTTGACCTCAGCACCATGCCGAAGCGGAA
AGGCATGTCCTTGGAGGAGAAGCGCCAAACAATCTTGAAAATCTACCATT
CCACGGGTGCCGTCTACAGTCTAAAAGAGATGGAGGGTCTCGCATCGAAA
CAAGGTGTTGTGTCACAGAGCGTGAAGGACGTCAACCAAGGCCTCGTCGA
CGATGGCTTGGTCGAAATGGAAAAGGTTGGAGCAAGCAACGTTTTCTTCG
CCTTTCCTGGCAAGGCTATTGCGTCGAAAAGGACCGCCACCGTCAATTTA
GAGAGCGAAGTCGCTAGACTCAAAGCTCACGTAAGCACGTTGGAAGAGAA
AGCAGCAGCTTTGTCAGCGGGACGCCAAGATTCCGAAAAGAGGAGACAGA
ACATGGAGGACTACGAAACTGCCCTTGCCCTGAAAACGAAGCAGTTGGAG
GAAGTGCAACGCTTCAAGGATAATGACCCGGTGAAGATCGAACGGCTTGA
GGCGCAGGCTGCTCTCTGTAAGCAGGGAGTCAATCGGTGGACGGACAATA
TCTTCTCCATTAAGAGCTACTTGGTCAAAAAACGCGGCATGTACAGCAAG
GACGTCGACAAATTCCTAGGGCTCACGGACTCATTTGACTATGTGGAGTG
AAGACATCAGGACAATGAACCGTCAAAAGTAGGGAAAGGGGGAGAATGGG
GGGGGGGGACGTCGGAGGAGCTCTCAAAGTAAAAAAGGAAACATGAAAGG
ACAGGAGTGACCAGAAAAGGAAAACGCACTAATGACGTTCAAGGCCTTCC
ATCGATGGACCAATGAGGGAAAAATTCTGTCAACAACAGTCCTCGCCTTC
CTGAAACGAGTCCACTGCCCTCCACATGCGCCAAGCACAAGGCGGTTGAC
TTTGCTTCCAAGTATTGAGACATGGGTTCTCCTCGGCGCCCTGCGTTCCT
TTCTTGACCATACTTTTTACATGCTGATCCCCACACTGCTCCTTGGAAGA
AAGCACATGACCCACAGCCCTTGCGCCGCCTGCCTCCAAGCTGTGTTTTT
GGCCCCATTGCCCCCTCAGGAATCGATAGGGAAGACGCAAGGCAGGAGAA
AGATGCAGTCATGACGTTCATGCCCAAGCACGCGAACCGCGTGCTTCCAG
GACCCCGACTCTGAATGGTAGGGAAAAGAGCCAGCACTGTCAGAAGGAGA
CCGCAAATCCCCGAAGGGAGAGAGATCGTGCTGTCTATCCCCATATAATC
TGTGCCTTTCTTTCTATCTTCGCCCAGGAGAGCCGCCCCCATCCCAGGCA
TCCACGGCAGATAGAAAGAGCTCCGGCACCCTTCAATGAGGATGTTCTCT
TTGGCAGGGGACCAAGAGGAACGATGAAGAGAGGCAAAGAACGACAAAGA
ACAACGCTGTCAGGCATGA
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protein sequence of rna4614

>rna4614-protein ID=rna4614-protein|Name=rna4614|organism=Nannochloropsis gaditana|type=polypeptide|length=123bp
MLELGQLLKVLKHRLGLSDADLRGTVMVAPGAGGGSDGGAAAGAAEEEKQ
EEKDAFDVKLVSFEDKSKIKVIKEVRTISGLGLKEAKELVEGAPKVIKKD
VKKEEAEALLKKLQDVGAKVELV
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mRNA from alignment at CM002463.1:1051077..1052695-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4614 ID=rna4614|Name=rna4614|organism=Nannochloropsis gaditana|type=mRNA|length=1619bp|location=Sequence derived from alignment at CM002463.1:1051077..1052695- (Nannochloropsis gaditana)
TCTCGGAGCGTGTCGCGGTTTTGAGTGAGGAAATCCTGTCCTTGAATATG
TTGGAGCTAGGGCAGCTCCTCAAGGTTTTGAAGGTAAAGCCTTACCCCTC
CCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCTCGCCTTTCCTCCA
CATGCCTTCTCTTCCCTTCCTTCCTCCCTCTTCCCCCCCCATCTCATGAC
CCCTTCTTCCCTCCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTC
CCTCCCTCCATCCATCCCTCCTTCCCTCCCCCCCTCCCTCCTTTCCTCCC
TAAGCACCGGCTGGGCCTTTCGGATGCGGACCTGCGGGGTACGGTCATGG
TGGCGCCAGGTGCTGGGGGAGGTAGCGACGGAGGGGCAGCGGCAGGAGCT
GCAGAGGAGGAGAAGCAGGAGGAGAAGGACGCTTTCGATGTCAAACTTGT
TTCATTCGAGGATAAGAGCAAGATCAAGGTTATCAAAGAGGTAGGGCGCC
GCCTTTCCCTCTCTCCCTCCCTCCCTCCCCCCATCCTTCCCTCCTTCCCT
CCCTCGCTTCCGCTTTTTTATTCAAGGACGATATAACATTCACGGGTAAC
GCTTCCTGACCACTCCCCTACCCTCATCTTTTTGTCTGCGAGACGCCCGT
CCTCCTCCCTCATACCGTTCTTTTCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTTCCTTCCTTTTCCCCTCAAGGTCCGTACCATCAGTGGCTTGGGCC
TGAAGGAAGCCAAAGAGCTTGTGGAAGGGGCGCCGAAGGTGCGTGTCGCC
TCCCTCCCGCCCTCCCTCCCGCCCTCCTTCCCGCCCTCCTTCCCGCCCTT
CCTCCCATCCTCCTTATCGATTTTCCCCTGCCCCACACGCATGCGGCGCG
CCTCATCCCTCTGACCACTCGCTTTCTACCCGTTCTCTGCCTTCCCTGTC
GCCGCAGGTGATCAAGAAGGACGTGAAGAAGGAGGAGGCGGAAGCCCTCC
TTAAGAAACTGCAGGACGTAGGCGCGAAGGTGGAGTTGGTGTAGGAAGGA
GGGGCGATAGGGAGGAGAGGGAGAAGTGATAATGTGTCACGGTGATAAAT
GGTGCATAAAATAGAGGAAAAGCGATGGCGCTGGAAGGAAAGCGGGGCCG
GAGGGGGGGAGGCATTAGGAAGAGTGACAGGGGACGGTTGGAGATGGAGA
AGGGTGATGCCGTCAAGGACGGGGAGGGGGGGAGGGGTCATGTGGAAAGG
ATGGGAGAAGGGGAGAAGACGAGAGGGGGGATGGAACGGAGGGTCAGCAG
TGTGGGAAGGGTGGATCTAGGAGGCGATATGGAGGGAATGGGAAGGCGCT
GTCACGGCGGTTCCTGCGTGGGAGGGGATTCAGCCGGCGGAACGTCCGGT
GGCAGGAGGATGGTATTGGATGCCAGCGGAAAGGAGCACGGTACAAAGAG
TGTGGGGCGGGGAATGTCGAGTCAGGATCGTTTCTAAGGGCGCCCATCGT
CGGAAACATGGAAAGAAGGGAATCATGCCTGACAGCGTTGTTCTTTGTCG
TTCTTTGCCTCTCTTCATCGTTCCTCTTGGTCCCCTGCCAAAGAGAACAT
CCTCATTGAAGGGTGCCGG
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Coding sequence (CDS) from alignment at CM002463.1:1051077..1052695-

>rna4614 ID=rna4614|Name=rna4614|organism=Nannochloropsis gaditana|type=CDS|length=1488bp|location=Sequence derived from alignment at CM002463.1:1051077..1052695- (Nannochloropsis gaditana)
GTGATCAAGAAGGACGTGAAGAAGGAGGAGGCGGAAGCCCTCCTTAAGAA
ACTGCAGGACGTAGGCGCGAAGGTGGAGTTGGTGTAGGTCCGTACCATCA
GTGGCTTGGGCCTGAAGGAAGCCAAAGAGCTTGTGGAAGGGGCGCCGAAG
CACCGGCTGGGCCTTTCGGATGCGGACCTGCGGGGTACGGTCATGGTGGC
GCCAGGTGCTGGGGGAGGTAGCGACGGAGGGGCAGCGGCAGGAGCTGCAG
AGGAGGAGAAGCAGGAGGAGAAGGACGCTTTCGATGTCAAACTTGTTTCA
TTCGAGGATAAGAGCAAGATCAAGGTTATCAAAGAGATGTTGGAGCTAGG
GCAGCTCCTCAAGGTTTTGAAGGTGATCAAGAAGGACGTGAAGAAGGAGG
AGGCGGAAGCCCTCCTTAAGAAACTGCAGGACGTAGGCGCGAAGGTGGAG
TTGGTGTAGGTCCGTACCATCAGTGGCTTGGGCCTGAAGGAAGCCAAAGA
GCTTGTGGAAGGGGCGCCGAAGCACCGGCTGGGCCTTTCGGATGCGGACC
TGCGGGGTACGGTCATGGTGGCGCCAGGTGCTGGGGGAGGTAGCGACGGA
GGGGCAGCGGCAGGAGCTGCAGAGGAGGAGAAGCAGGAGGAGAAGGACGC
TTTCGATGTCAAACTTGTTTCATTCGAGGATAAGAGCAAGATCAAGGTTA
TCAAAGAGATGTTGGAGCTAGGGCAGCTCCTCAAGGTTTTGAAGGTGATC
AAGAAGGACGTGAAGAAGGAGGAGGCGGAAGCCCTCCTTAAGAAACTGCA
GGACGTAGGCGCGAAGGTGGAGTTGGTGTAGGTCCGTACCATCAGTGGCT
TGGGCCTGAAGGAAGCCAAAGAGCTTGTGGAAGGGGCGCCGAAGCACCGG
CTGGGCCTTTCGGATGCGGACCTGCGGGGTACGGTCATGGTGGCGCCAGG
TGCTGGGGGAGGTAGCGACGGAGGGGCAGCGGCAGGAGCTGCAGAGGAGG
AGAAGCAGGAGGAGAAGGACGCTTTCGATGTCAAACTTGTTTCATTCGAG
GATAAGAGCAAGATCAAGGTTATCAAAGAGATGTTGGAGCTAGGGCAGCT
CCTCAAGGTTTTGAAGGTGATCAAGAAGGACGTGAAGAAGGAGGAGGCGG
AAGCCCTCCTTAAGAAACTGCAGGACGTAGGCGCGAAGGTGGAGTTGGTG
TAGGTCCGTACCATCAGTGGCTTGGGCCTGAAGGAAGCCAAAGAGCTTGT
GGAAGGGGCGCCGAAGCACCGGCTGGGCCTTTCGGATGCGGACCTGCGGG
GTACGGTCATGGTGGCGCCAGGTGCTGGGGGAGGTAGCGACGGAGGGGCA
GCGGCAGGAGCTGCAGAGGAGGAGAAGCAGGAGGAGAAGGACGCTTTCGA
TGTCAAACTTGTTTCATTCGAGGATAAGAGCAAGATCAAGGTTATCAAAG
AGATGTTGGAGCTAGGGCAGCTCCTCAAGGTTTTGAAG
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Synonyms
Publications