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Properties
| Property Name | Value |
|---|
| Product | conserved unknown protein |
| Orig transcript id | gnl|cribi|Naga_100014g57.9327.mrna |
| Orig protein id | gnl|cribi|Naga_100014g57.9327 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:958306..959723 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4579 ID=rna4579|Name=rna4579|organism=Nannochloropsis gaditana|type=mRNA|length=1935bp
ATGATGATGAACGAGGCACACGCATGGGCCGTGGGCCGTCCAGGCTGGGC
GACCCTAGTTATTAACATAAACAGAAATATAGATGAAAGAAGCAAAAGAA
CAGAACCAGCTCCGCTTTCCCCTTGCAAAGGCCTCCCGCTTACACATCCA
TGTGCCATCGATGCTGCTCCGACAAAGATGTCTCGACTGATCCCATTCGA
GTTATCAACTTTGAAAAAATCCTCTGATGAGATCGAAAACTCGATAGCGG
GACGTCCTTTACTACAAGTCAATGATATCGGTGGAGTCTTGTCTCCGAAT
TATGCCTTGGTGGGCGTCTTGGGAGAGAAAGAGCCGCGAAAACAGAGTAA
AAATGGGTGCAATTACATTGTTTGGTTCATAGATAATTTAAAAGGCCAAT
CTATCAAAATTTTATTATTCGGAGATGCTGTACTGAGCGGTGAAAACGTA
CCGCTTGGTGCTGTATGCCTCCTCCTGGACCCTGTAGGCTCAAGGCCTGC
CCCATCTGCGGCCATGTCTTTGAAGATCCACAAGCCTCATCAGGTGATAC
AGATTGGTCTCTCTGCTCATTATGCTACTTGTGGTTTTATAGATCCGTAT
GGCTTTGAATGCGATAAGGTCTACAATCGCCATAATGCCCGATTTTGCAA
AGTGCATAGTGCCACGCCGCCGTCGAGCCAGGCCCTGAGCCTGCCGAATC
GAGTGGCGATTACCGCGCCATCTCGTGCAATTACAAGTTCACTTCCTACG
GGTACCACACGCCCATGTGGGCTACGAGGACATAATGGCAAACCTCATAT
TTCTAGACCGACTATGTCTGTGGACCGGCCTTCCAGCCTGATTCAGAAGC
CGGGTAAAATAGCACGGTATCAGCCCAAAAAAAGAGAACTCCTCGAGAAG
ATAATCAAGCGTGATCAACCTCATCGGTCCTACACATGGCAGCCAACATT
ATCCAGAACTGCCCGGACAGTCAACGTCCCCGAGAGCAGAACAAACCAAA
CATTCGATGGTCATGTTGGCGGGACTAACCTCGGAACGGGTGATAGATCC
GCGCGCATGGATGTGCAACAAACTGCCAAAGAGAACGGAGTCCGGGGAAT
CGCAGCCATCCTCGCTGCCGATGAACTTAACAAAGATGGCGAGGTCTTGA
TACCAGAACCATCGCGTATCTTCGCTCGGGGTCCGGATTCGGTGGCCTAC
GCAGCCTTTCGACATGAGCAGGAGGCAAAGCGCCAGGCTCGACAGGTTGG
CGCCTTGCAATATCGACAGCTTCAACAGAAGCAAAGCGAGGCTAAGGCTG
TTCGGGCAATGAATTTCTGCAAGCGCATGGGTGGAACAATTCGCATGATA
CAGAAGCCTGAAAATGTTATGCTAAAACCGAAGCCGCGAATGACGGTACC
TTCATCAGCGGGGAACAGACGTCAGCTGTATGCGGATGGAATGGGCTTGA
ACGAGGCAGAGAGCCTCATGAAGAGCAAGTCGAAGCATTCTGCCGAAGCT
CGTGGCGAGCTGATGGAACACCTCCATGGCGTTTTCGAGGCTCTCGGTGA
GAAGGAAACTCGCGCGGAGTACTTCAAAAATCTTTCGTCCATCGAAGTTG
TAGCAGTCAGTTGCCAGGAGTGCAACCGTTTGTTTGAAAAACACCCTCGT
CTGTGTGCGAAAAGAGGACATATTTTGAAAAGGCTCACCATCAAAAAACG
GTTCTTCATTTGTGGGAATCAGGGATGCTCAGAGGAGGTATCCATGCTAG
GCAGTGCTGCACCCCATGAGGCATGTAGTCGGTGCGGTGAAAAGCTCTGG
AGGGCCAAGGGTAAGGGTAGCAAAGCTGCTGCTGGCGGGGATACACGTGC
CAAGAGCAATGGTGTCGGGGTCTTGATTCCCGCAGTCTCGGAATGGAACC
GGAACGCGGATTTGTCAAGCTTATACACTGAGTAA back to topprotein sequence of rna4579 >rna4579-protein ID=rna4579-protein|Name=rna4579|organism=Nannochloropsis gaditana|type=polypeptide|length=434bp
MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGS
SINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMG
ARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNY
CACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFK
EIDALQGDKARPLEEEERLFLEAIRGLNQEASSMQREEKADLGGASTSDP
EHSADDQPAARDAATAAGAACQTHRSAPASATVVPELASGGDAAREEIGT
DATPASKVSDGDPSVTPPTAAVADEVAETEGANGGKRRRLCIYASWIPKL
VKNICIRKTNFYHVISKDARELVRSPIAPLELKSLRSKSCHPASTVTASL
LTDTHFAAIYVLQRKRTRQSHRGAFSIFLVSPST back to topmRNA from alignment at CM002463.1:958306..959723- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4579 ID=rna4579|Name=rna4579|organism=Nannochloropsis gaditana|type=mRNA|length=1418bp|location=Sequence derived from alignment at CM002463.1:958306..959723- (Nannochloropsis gaditana)
ATGAAATTCGGGAAGCAACTGGCCAAGGTGGTGGCACTTTCCGACCCGGA
ATGGGCGCCATTCTGGGTAAGCTACAAAGCGCTGAAGAAGCGTGTTAAGG
AGCTCACTGAGTCTCCCCCTGCTGCGACGCAGCCAAGGGACGCGGGCAGT
AGCATCAATCAGACTGGTCCCTCCACCAACACGGAGCCGAATCCTAAGGA
ACTGGCACAGAGCGCCGGAGAAGTAGCCTTCTTTCGGACTCTGCGCGCTG
AGGTTGCAAAGGCGTCAGAATTTTATCTGGGAATGGAGCAGCAGATGGGT
GCCAGACGCCGTCGAATCAAGTTGGGACTTCAATATTTGAAGCAGCCTAC
GACAGTGCTCGAGGACGATGCGTGGATCAAGATGGGCCGAGCGTGTATTT
CTCTTTACAAGGATCTGCTGCTTCTCGAAAACTTTGCTGTCATGAATTAT
TGTGGTAAGTTCACGTGAGATTACTGTTCGTCTATCCGCCATTTATCGTC
TAAGTTTCACGTTCCTTACAGCCTGCTCGAAAGCTTTGAAAAAACACGAT
AAGACGGTTGTGCTGGACACGCGATCACGCTTCATGCGCAACGTGGTAAA
TCAGCAGCCATTTACACATTATCCTCGCCTCCTGGAAATGCTGCAGGAGA
TGGAGGAGATATTCAAGGAGATCGACGCCTTGCAAGGAGACAAGGCGCGT
CCCCTAGAAGAGGAAGAGAGGCTCTTCCTGGAGGCTATTCGCGGCCTGAA
CCAGGAGGCATCCAGCATGCAACGAGAGGAAAAAGCGGACTTGGGAGGTG
CATCAACGTCCGACCCCGAACATTCTGCCGACGACCAGCCGGCTGCGAGA
GACGCAGCCACCGCGGCCGGTGCTGCTTGTCAGACGCACAGATCAGCTCC
CGCGTCAGCTACTGTGGTGCCGGAATTGGCATCAGGGGGGGATGCAGCTA
GAGAAGAAATAGGGACAGATGCCACTCCGGCTTCAAAGGTATCAGACGGG
GACCCTAGCGTCACACCGCCCACAGCGGCTGTGGCAGACGAAGTAGCAGA
AACTGAAGGAGCAAATGGGGGAAAACGCCGCCGTGTCTAGGACATGCCGA
GGTGGTCTTCACGTGGACAAAGAATAAGGGCTGTGTATATATGCCTCCTG
GATACCCAAGCTAGTCAAAAACATATGTATCCGGAAGACAAACTTTTATC
ACGTCATCAGTAAGGACGCGCGTGAGTTAGTAAGAAGCCCGATAGCCCCT
CTTGAATTGAAGAGTTTAAGAAGCAAAAGCTGCCACCCAGCCAGCACGGT
CACCGCGTCGCTACTCACAGACACGCACTTTGCAGCTATATATGTATTAC
AAAGAAAAAGAACACGACAAAGCCATCGTGGTGCGTTTTCTATTTTTTTG
GTATCACCCTCGACTTAA back to topCoding sequence (CDS) from alignment at CM002463.1:958306..959723- >rna4579 ID=rna4579|Name=rna4579|organism=Nannochloropsis gaditana|type=CDS|length=3915bp|location=Sequence derived from alignment at CM002463.1:958306..959723- (Nannochloropsis gaditana)
GGCTGTGTATATATGCCTCCTGGATACCCAAGCTAGTCAAAAACATATGT
ATCCGGAAGACAAACTTTTATCACGTCATCAGTAAGGACGCGCGTGAGTT
AGTAAGAAGCCCGATAGCCCCTCTTGAATTGAAGAGTTTAAGAAGCAAAA
GCTGCCACCCAGCCAGCACGGTCACCGCGTCGCTACTCACAGACACGCAC
TTTGCAGCTATATATGTATTACAAAGAAAAAGAACACGACAAAGCCATCG
TGGTGCGTTTTCTATTTTTTTGGTATCACCCTCGACTTAACCTGCTCGAA
AGCTTTGAAAAAACACGATAAGACGGTTGTGCTGGACACGCGATCACGCT
TCATGCGCAACGTGGTAAATCAGCAGCCATTTACACATTATCCTCGCCTC
CTGGAAATGCTGCAGGAGATGGAGGAGATATTCAAGGAGATCGACGCCTT
GCAAGGAGACAAGGCGCGTCCCCTAGAAGAGGAAGAGAGGCTCTTCCTGG
AGGCTATTCGCGGCCTGAACCAGGAGGCATCCAGCATGCAACGAGAGGAA
AAAGCGGACTTGGGAGGTGCATCAACGTCCGACCCCGAACATTCTGCCGA
CGACCAGCCGGCTGCGAGAGACGCAGCCACCGCGGCCGGTGCTGCTTGTC
AGACGCACAGATCAGCTCCCGCGTCAGCTACTGTGGTGCCGGAATTGGCA
TCAGGGGGGGATGCAGCTAGAGAAGAAATAGGGACAGATGCCACTCCGGC
TTCAAAGGTATCAGACGGGGACCCTAGCGTCACACCGCCCACAGCGGCTG
TGGCAGACGAAGTAGCAGAAACTGAAGGAGCAAATGGGGGAAAACGCCGC
CATGAAATTCGGGAAGCAACTGGCCAAGGTGGTGGCACTTTCCGACCCGG
AATGGGCGCCATTCTGGGTAAGCTACAAAGCGCTGAAGAAGCGTGTTAAG
GAGCTCACTGAGTCTCCCCCTGCTGCGACGCAGCCAAGGGACGCGGGCAG
TAGCATCAATCAGACTGGTCCCTCCACCAACACGGAGCCGAATCCTAAGG
AACTGGCACAGAGCGCCGGAGAAGTAGCCTTCTTTCGGACTCTGCGCGCT
GAGGTTGCAAAGGCGTCAGAATTTTATCTGGGAATGGAGCAGCAGATGGG
TGCCAGACGCCGTCGAATCAAGTTGGGACTTCAATATTTGAAGCAGCCTA
CGACAGTGCTCGAGGACGATGCGTGGATCAAGATGGGCCGAGCGTGTATT
TCTCTTTACAAGGATCTGCTGCTTCTCGAAAACTTTGCTGTCATGAATTA
TTGTGGGCTGTGTATATATGCCTCCTGGATACCCAAGCTAGTCAAAAACA
TATGTATCCGGAAGACAAACTTTTATCACGTCATCAGTAAGGACGCGCGT
GAGTTAGTAAGAAGCCCGATAGCCCCTCTTGAATTGAAGAGTTTAAGAAG
CAAAAGCTGCCACCCAGCCAGCACGGTCACCGCGTCGCTACTCACAGACA
CGCACTTTGCAGCTATATATGTATTACAAAGAAAAAGAACACGACAAAGC
CATCGTGGTGCGTTTTCTATTTTTTTGGTATCACCCTCGACTTAACCTGC
TCGAAAGCTTTGAAAAAACACGATAAGACGGTTGTGCTGGACACGCGATC
ACGCTTCATGCGCAACGTGGTAAATCAGCAGCCATTTACACATTATCCTC
GCCTCCTGGAAATGCTGCAGGAGATGGAGGAGATATTCAAGGAGATCGAC
GCCTTGCAAGGAGACAAGGCGCGTCCCCTAGAAGAGGAAGAGAGGCTCTT
CCTGGAGGCTATTCGCGGCCTGAACCAGGAGGCATCCAGCATGCAACGAG
AGGAAAAAGCGGACTTGGGAGGTGCATCAACGTCCGACCCCGAACATTCT
GCCGACGACCAGCCGGCTGCGAGAGACGCAGCCACCGCGGCCGGTGCTGC
TTGTCAGACGCACAGATCAGCTCCCGCGTCAGCTACTGTGGTGCCGGAAT
TGGCATCAGGGGGGGATGCAGCTAGAGAAGAAATAGGGACAGATGCCACT
CCGGCTTCAAAGGTATCAGACGGGGACCCTAGCGTCACACCGCCCACAGC
GGCTGTGGCAGACGAAGTAGCAGAAACTGAAGGAGCAAATGGGGGAAAAC
GCCGCCATGAAATTCGGGAAGCAACTGGCCAAGGTGGTGGCACTTTCCGA
CCCGGAATGGGCGCCATTCTGGGTAAGCTACAAAGCGCTGAAGAAGCGTG
TTAAGGAGCTCACTGAGTCTCCCCCTGCTGCGACGCAGCCAAGGGACGCG
GGCAGTAGCATCAATCAGACTGGTCCCTCCACCAACACGGAGCCGAATCC
TAAGGAACTGGCACAGAGCGCCGGAGAAGTAGCCTTCTTTCGGACTCTGC
GCGCTGAGGTTGCAAAGGCGTCAGAATTTTATCTGGGAATGGAGCAGCAG
ATGGGTGCCAGACGCCGTCGAATCAAGTTGGGACTTCAATATTTGAAGCA
GCCTACGACAGTGCTCGAGGACGATGCGTGGATCAAGATGGGCCGAGCGT
GTATTTCTCTTTACAAGGATCTGCTGCTTCTCGAAAACTTTGCTGTCATG
AATTATTGTGGGCTGTGTATATATGCCTCCTGGATACCCAAGCTAGTCAA
AAACATATGTATCCGGAAGACAAACTTTTATCACGTCATCAGTAAGGACG
CGCGTGAGTTAGTAAGAAGCCCGATAGCCCCTCTTGAATTGAAGAGTTTA
AGAAGCAAAAGCTGCCACCCAGCCAGCACGGTCACCGCGTCGCTACTCAC
AGACACGCACTTTGCAGCTATATATGTATTACAAAGAAAAAGAACACGAC
AAAGCCATCGTGGTGCGTTTTCTATTTTTTTGGTATCACCCTCGACTTAA
CCTGCTCGAAAGCTTTGAAAAAACACGATAAGACGGTTGTGCTGGACACG
CGATCACGCTTCATGCGCAACGTGGTAAATCAGCAGCCATTTACACATTA
TCCTCGCCTCCTGGAAATGCTGCAGGAGATGGAGGAGATATTCAAGGAGA
TCGACGCCTTGCAAGGAGACAAGGCGCGTCCCCTAGAAGAGGAAGAGAGG
CTCTTCCTGGAGGCTATTCGCGGCCTGAACCAGGAGGCATCCAGCATGCA
ACGAGAGGAAAAAGCGGACTTGGGAGGTGCATCAACGTCCGACCCCGAAC
ATTCTGCCGACGACCAGCCGGCTGCGAGAGACGCAGCCACCGCGGCCGGT
GCTGCTTGTCAGACGCACAGATCAGCTCCCGCGTCAGCTACTGTGGTGCC
GGAATTGGCATCAGGGGGGGATGCAGCTAGAGAAGAAATAGGGACAGATG
CCACTCCGGCTTCAAAGGTATCAGACGGGGACCCTAGCGTCACACCGCCC
ACAGCGGCTGTGGCAGACGAAGTAGCAGAAACTGAAGGAGCAAATGGGGG
AAAACGCCGCCATGAAATTCGGGAAGCAACTGGCCAAGGTGGTGGCACTT
TCCGACCCGGAATGGGCGCCATTCTGGGTAAGCTACAAAGCGCTGAAGAA
GCGTGTTAAGGAGCTCACTGAGTCTCCCCCTGCTGCGACGCAGCCAAGGG
ACGCGGGCAGTAGCATCAATCAGACTGGTCCCTCCACCAACACGGAGCCG
AATCCTAAGGAACTGGCACAGAGCGCCGGAGAAGTAGCCTTCTTTCGGAC
TCTGCGCGCTGAGGTTGCAAAGGCGTCAGAATTTTATCTGGGAATGGAGC
AGCAGATGGGTGCCAGACGCCGTCGAATCAAGTTGGGACTTCAATATTTG
AAGCAGCCTACGACAGTGCTCGAGGACGATGCGTGGATCAAGATGGGCCG
AGCGTGTATTTCTCTTTACAAGGATCTGCTGCTTCTCGAAAACTTTGCTG
TCATGAATTATTGTG back to top
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