EWM26150.1, cds4567 (CDS) Nannochloropsis gaditana

Overview
NameEWM26150.1
Unique Namecds4567
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:959270..959723 -
Alignment locationCM002463.1:958642..959202 -
Alignment locationCM002463.1:958306..958595 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26150.1
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_100014g57.9327.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:959270..959723 -
CM002463.1supercontigCM002463.1:958642..959202 -
CM002463.1supercontigCM002463.1:958306..958595 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0007154cell communication
GO:0009605response to external stimulus
Vocabulary: INTERPRO
TermDefinition
IPR004331SPX_N
Homology
BLAST of EWM26150.1 vs. NCBI_GenBank
Match: gi|585108144|gb|EWM26150.1| (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 898.656 bits (2321), Expect = 0.000e+0
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0
Query:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKARPLEEEERLFLEAIRGLNQEASSMQREEKADLGGASTSDPEHSADDQPAARDAATAAGAACQTHRSAPASATVVPELASGGDAAREEIGTDATPASKVSDGDPSVTPPTAAVADEVAETEGANGGKRRRLCIYASWIPKLVKNICIRKTNFYHVISKDARELVRSPIAPLELKSLRSKSCHPASTVTASLLTDTHFAAIYVLQRKRTRQSHRGAFSIFLVSPST 434
            MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKARPLEEEERLFLEAIRGLNQEASSMQREEKADLGGASTSDPEHSADDQPAARDAATAAGAACQTHRSAPASATVVPELASGGDAAREEIGTDATPASKVSDGDPSVTPPTAAVADEVAETEGANGGKRRRLCIYASWIPKLVKNICIRKTNFYHVISKDARELVRSPIAPLELKSLRSKSCHPASTVTASLLTDTHFAAIYVLQRKRTRQSHRGAFSIFLVSPST
Sbjct:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKARPLEEEERLFLEAIRGLNQEASSMQREEKADLGGASTSDPEHSADDQPAARDAATAAGAACQTHRSAPASATVVPELASGGDAAREEIGTDATPASKVSDGDPSVTPPTAAVADEVAETEGANGGKRRRLCIYASWIPKLVKNICIRKTNFYHVISKDARELVRSPIAPLELKSLRSKSCHPASTVTASLLTDTHFAAIYVLQRKRTRQSHRGAFSIFLVSPST 434          
BLAST of EWM26150.1 vs. NCBI_GenBank
Match: gi|298712791|emb|CBJ48756.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 215.698 bits (548), Expect = 1.700e-63
Identity = 113/247 (45.75%), Postives = 155/247 (62.75%), Query Frame = 0
Query:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDALQGDKAR-----PLEEEERLFLEAIRGLNQEASSMQREEKADL 242
            MKFGK + +VV LSDPEW+PFW++YK LKK+VK L E P    +   A  S            +P+ +A+SAGEV F+R LR E+ K SEF+ G+E Q+G R+ R+  G + L  P  V+E +   ++  AC+ LYKDLLLLENFA+MNYC  SK LKKHDK     TR  FM+NVV   PF  YP++++ML  +E +FK I++L    A      PL EE+ LF++ +  +N EA  +Q+ E AD+
Sbjct:    1 MKFGKNIGRVVELSDPEWSPFWINYKFLKKKVKAL-EVPSGKPEVSPAKRS------------DPQAMARSAGEVEFYRLLRQELRKCSEFFTGVEGQLGVRQARVNEGWRQLLLPNVVVEGNPNKRLMAACVKLYKDLLLLENFAIMNYCGFSKILKKHDKLTGFRTRESFMKNVVKNAPFVQYPKVIKMLSAVEALFKNIESLPSASAEAGTRVPLREEQ-LFIDTMLTINTEAFRLQQAEGADI 233          
BLAST of EWM26150.1 vs. NCBI_GenBank
Match: gi|219122532|ref|XP_002181597.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406873|gb|EEC46811.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 175.252 bits (443), Expect = 3.773e-47
Identity = 102/282 (36.17%), Postives = 145/282 (51.42%), Query Frame = 0
Query:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKEL----------------------TESPPAATQPRDAGSSINQTGP--------------------STNTEPNP--------KELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEI-DALQGDKARPLEEEERLFLEAIRGLNQEA 231
            MKF K L +VV +SDPEWAP+W +YK LKK +KEL                      TE P + +      S I  TG                      T    NP        +EL +S GE+AFF+ L  E  KA+ F+   +Q+   R  R++ G + ++QP +++ ++ W  + ++   LYKDLLL E FA+M YC+ SK LKKHDK     TR  FM NVVN+  FT+YPR+LEM+   E ++  + + L  +    L E+ERLF+  I  LN++A
Sbjct:    1 MKFCKNLQRVVDISDPEWAPYWTNYKMLKKLIKELPSLVPGEDTTGREAEKRSRAPSTEGPRSDSPESFDSSMIASTGSQHRGDRTTENESHMTSFEQDDTEEGTNPPHEAAYRKEELNRSPGEIAFFKLLHTEFKKATFFFDKAQQEFIIREERVQEGSKIMEQPNSIMVNEKWSLLAKSIYRLYKDLLLFETFAIMTYCSFSKILKKHDKVTGHQTRKAFMANVVNKANFTNYPRVLEMISRCEHLYDGVSNRLLQEGKEGLYEDERLFINMIARLNEQA 282          
BLAST of EWM26150.1 vs. NCBI_GenBank
Match: gi|1210512326|dbj|GAX28595.1| (hypothetical protein FisN_1Hh614 [Fistulifera solaris])

HSP 1 Score: 168.703 bits (426), Expect = 5.879e-45
Identity = 97/269 (36.06%), Postives = 146/269 (54.28%), Query Frame = 0
Query:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKEL---------TESPPAATQP---RDAGSSINQT-----GPSTNTEPNPK-------------------ELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDAL---QGDKARPLEEEERLFLEAIRGLNQE 230
            MKF K L KVV +SDPEWAP+W +YK LKK +K+L          E P A  +     D     +Q      G S  ++ +P+                   EL ++ GE+AFF+ L  E  KAS F+   +Q+   R  R++ G++ +K+ +  L  + W    ++   LYKDLLLLE FA+M YC+ SK LKKHDK     TR+ FM  +VN+  F  YP++L+M+   E++++++      QG++A  L E+ERLF+  I  LN++
Sbjct:    1 MKFCKNLQKVVDISDPEWAPYWTNYKMLKKLIKDLPLFIPSDESLEKPEAEEKIVSLSDTSKVCSQENCVAHGESEQSQCDPRTSEDDFTGDLESGVQHQKQELGRNPGEIAFFKQLHVEFKKASHFFDKAQQEFSIREERVREGMEIMKR-SDALASEKWALSAKSIYRLYKDLLLLETFAIMTYCSFSKILKKHDKVTGHQTRTAFMSKIVNKSNFASYPKVLDMINRCEQMYEDVSKSLLEQGNEA--LYEDERLFINMISRLNEQ 266          
BLAST of EWM26150.1 vs. NCBI_GenBank
Match: gi|397640401|gb|EJK74098.1| (hypothetical protein THAOC_04244 [Thalassiosira oceanica])

HSP 1 Score: 166.777 bits (421), Expect = 4.154e-44
Identity = 94/261 (36.02%), Postives = 146/261 (55.94%), Query Frame = 0
Query:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKEL-----TESPPAATQP---------RDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMG--ARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEI-DALQGDKARPLEEEERLFLEAIRGLNQEASSMQREEKADLGG 244
            MKF + L +V+ ++DPEWAP+W +YK LKK +K++      E  PA   P         + A   I Q   S++      E+  + GEVAFF+ + +E+ KA  F+   + Q+    R  R++ G+  +K+ + ++  + W  M ++   LYKDLLLLE +A+M YC+ SK LKKHDK    +TR+ FM NVVN+  F  YPR+  M+   E ++ E+ ++L  +    L E+ERLF+  I  LN++     +EE A   G
Sbjct:    1 MKFCRNLQRVIDITDPEWAPYWTNYKMLKKFLKQMPSIVSAEGDPADCDPVSLDGERKTKTAMVPIQQNTLSSSA----VEMRNNPGEVAFFKLVNSELKKAIHFFDKRKAQLEYEIREARVREGIDIMKKASPLMVSEKWSLMAKSLYRLYKDLLLLETYAIMTYCSFSKILKKHDKVTRHNTRTAFMANVVNKANFAQYPRVSAMITRCERLYDEVSNSLIQEGKSGLYEDERLFINMIHRLNEQVLDTAQEEGAPEAG 257          
BLAST of EWM26150.1 vs. NCBI_GenBank
Match: gi|695375492|ref|XP_009515556.1| (hypothetical protein PHYSODRAFT_248423 [Phytophthora sojae] >gi|348688467|gb|EGZ28281.1| hypothetical protein PHYSODRAFT_248423 [Phytophthora sojae])

HSP 1 Score: 153.68 bits (387), Expect = 8.068e-40
Identity = 82/203 (40.39%), Postives = 125/203 (61.58%), Query Frame = 0
Query:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEID 203
            MKFGK L + +  S+PEWAPFW++YK LKKR+K +T         R A  ++NQ           +++++S  EVAFFR L+AE+ K S FY   E+++  R ++++  L+ LK+   +   +A  ++  A +  Y++ + LENFAVMNY   SK LKKHDK    +TRS++MR  VN   F++YP LL++L   EE+F E++
Sbjct:    1 MKFGKGLLQEILQSNPEWAPFWLNYKILKKRIKAVT---------RAAHHAVNQ-----------RDISESELEVAFFRDLQAELKKISLFYAAEEKRVAFRYQQLRSVLKTLKKREKIEASEAQ-RLMFAFVHFYRECIRLENFAVMNYQGFSKILKKHDKMTGYNTRSKYMRRKVNLSSFSNYPSLLQILASTEEMFHEVE 182          
BLAST of EWM26150.1 vs. NCBI_GenBank
Match: gi|673037518|ref|XP_008872720.1| (hypothetical protein H310_08658 [Aphanomyces invadans] >gi|574471516|gb|ETV98523.1| hypothetical protein H310_08658 [Aphanomyces invadans])

HSP 1 Score: 151.369 bits (381), Expect = 1.318e-39
Identity = 80/202 (39.60%), Postives = 122/202 (60.40%), Query Frame = 0
Query:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEI 202
            MKFGK+L   V  S+PEW PFW++YKALKKR+K + ++ P +   R +  S          +P   +L Q   E+ FF  LR ++ K + FY+  E++   R ++++  L+ +K+ T V E DA  ++  AC+  Y + + LEN+AV NY   SK LKKHDK    +TR+++MR +VNQ PF +YP+L+ +L   E +F EI
Sbjct:    1 MKFGKELLNAVNQSNPEWGPFWMNYKALKKRIKAVVKTAPTSPTARASVDS---------EDPREVDLTQCQEEIDFFTELRDQLRKLACFYVAEEKRYLFRFQQLQAVLKDMKKKTEVDEIDA-KRLMVACVHFYGECIQLENYAVTNYQGFSKILKKHDKMTGHNTRTKYMRKMVNQSPFANYPQLISILDGTERMFTEI 192          
BLAST of EWM26150.1 vs. NCBI_GenBank
Match: gi|1173936416|gb|OQR87371.1| (hypothetical protein ACHHYP_08968 [Achlya hypogyna])

HSP 1 Score: 148.288 bits (373), Expect = 1.463e-38
Identity = 81/202 (40.10%), Postives = 122/202 (60.40%), Query Frame = 0
Query:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEI 202
            MKFGK+L   V  S+PEW PFW++YK LKKR+K +  S   +T P  AG+  +    +        EL Q+  E+ FF  LR ++ K + FY+  E++   R  +++  L+ +K+   V E DA  ++  A +  Y++ + LEN+AVMNY   SK LKKHDK    +TR+++MR +VNQ PF +YP+L+ ML+  E +F EI
Sbjct:    1 MKFGKELLNSVNQSNPEWGPFWMNYKVLKKRIKAVVGSQKPSTTP--AGTVADSAKEA--------ELTQNREEIEFFMELRDQLRKLACFYVSEEKRYLFRFHQLQAVLRDMKKKADVDEMDA-KRLMLAFVHFYRECIQLENYAVMNYQGFSKILKKHDKMTGHNTRTKYMRKMVNQSPFANYPQLITMLENTERMFAEI 191          
BLAST of EWM26150.1 vs. NCBI_GenBank
Match: gi|1173952913|gb|OQS00489.1| (hypothetical protein THRCLA_05941 [Thraustotheca clavata])

HSP 1 Score: 147.132 bits (370), Expect = 3.432e-38
Identity = 80/202 (39.60%), Postives = 121/202 (59.90%), Query Frame = 0
Query:    1 MKFGKQLAKVVALSDPEWAPFWVSYKALKKRVKELTESPPAATQPRDAGSSINQTGPSTNTEPNPKELAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEI 202
            MKFGK+L   V  S+PEW PFW++YK LKKR+K +     A  +P            ST +    ++L Q+  E+ FF  LR ++ K + FY+  E++   R  +++  L+ +K+ T V E DA  ++  A +  Y++ + LEN+AVMNY   SK LKKHDK    +TR+++MR +VNQ PF +YP+L+ ML+  E +F EI
Sbjct:    1 MKFGKELLNSVNQSNPEWGPFWMNYKVLKKRIKAVV----AVHEPN-----------STQSVDKEQQLTQNQEEIEFFMELRDQLRKLACFYIAEEKRYLFRFHQLQGVLKEMKKKTEVDEMDA-KRLMLAFVHFYRECIQLENYAVMNYQGFSKILKKHDKMTGHNTRTKYMRKMVNQSPFANYPQLITMLENTERMFAEI 186          
BLAST of EWM26150.1 vs. NCBI_GenBank
Match: gi|1072235998|gb|OEU20726.1| (hypothetical protein FRACYDRAFT_259654 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 152.525 bits (384), Expect = 3.579e-38
Identity = 80/228 (35.09%), Postives = 126/228 (55.26%), Query Frame = 0
Query:   68 LAQSAGEVAFFRTLRAEVAKASEFYLGMEQQMGARRRRIKLGLQYLKQPTTVLEDDAWIKMGRACISLYKDLLLLENFAVMNYCACSKALKKHDKTVVLDTRSRFMRNVVNQQPFTHYPRLLEMLQEMEEIFKEIDA-LQGDKARPLEEEERLFLEAIRGLNQEASSMQREEKADLGGASTSDPEHSADDQPAARDAATAAGAACQTHRSAPASATVVPELASGGDAA 294
            + +S GEVAFF+ L +E  KAS F+    ++   R  R++ G+  ++QP ++L ++ W  M ++   LYKDLLLLE FA+M YC+ SK LKKHDK    +TR+ FM N+VN+  FTHYP++L M+   E  ++E+   L  +    L E+ERLF+  I  LN++   +   + A  G  +          Q     +  A   + ++ R +PA++T+   L     AA
Sbjct:  151 IGKSPGEVAFFKLLHSEFKKASHFFDRATEEFTIREERVREGMDIMRQPNSILVNEKWGLMAKSIYRLYKDLLLLETFAIMTYCSFSKILKKHDKNTGYETRNAFMSNIVNKANFTHYPKVLSMITRCERFYEEVSVNLLKEGKEGLYEDERLFINMIHRLNEQV--LDSSDSAKQGKTT----------QRRTASSNVAGTISVRSDRLSPATSTLRNLLEENAKAA 366          
The following BLAST results are available for this feature:
BLAST of EWM26150.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108144|gb|EWM26150.1|0.000e+0100.00conserved unknown protein [Nannochloropsis gaditan... [more]
gi|298712791|emb|CBJ48756.1|1.700e-6345.75conserved unknown protein [Ectocarpus siliculosus][more]
gi|219122532|ref|XP_002181597.1|3.773e-4736.17predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210512326|dbj|GAX28595.1|5.879e-4536.06hypothetical protein FisN_1Hh614 [Fistulifera sola... [more]
gi|397640401|gb|EJK74098.1|4.154e-4436.02hypothetical protein THAOC_04244 [Thalassiosira oc... [more]
gi|695375492|ref|XP_009515556.1|8.068e-4040.39hypothetical protein PHYSODRAFT_248423 [Phytophtho... [more]
gi|673037518|ref|XP_008872720.1|1.318e-3939.60hypothetical protein H310_08658 [Aphanomyces invad... [more]
gi|1173936416|gb|OQR87371.1|1.463e-3840.10hypothetical protein ACHHYP_08968 [Achlya hypogyna... [more]
gi|1173952913|gb|OQS00489.1|3.432e-3839.60hypothetical protein THRCLA_05941 [Thraustotheca c... [more]
gi|1072235998|gb|OEU20726.1|3.579e-3835.09hypothetical protein FRACYDRAFT_259654 [Fragilario... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4579rna4579Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications