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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100014g38.9257.mrna |
| Orig protein id | gnl|cribi|Naga_100014g38.9257 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:914188..915347 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4560 ID=rna4560|Name=rna4560|organism=Nannochloropsis gaditana|type=mRNA|length=1424bp
ATCTTTCATTCCTTGCTCGGGAAGCTTGAAATAGGACGATACACTCAGAA
TAGTACGGTAATGAGAGGCCTTGGTTCTTATTCCCGGACTCGTCATGCTA
ATATATCCCTGTCGGACGCCGTGTGAAGGCGTGGTGAGGCACCAGGAGGT
TAAACACAGCAGGCGACGACACCATCCTATTGCTTCTGCTGCTTCGATGC
GGGCGCTTTCGAAGCCAGCATAGGGCATGGCACTCCCCAACTTCCGAGTC
TTCACATCTTATTCGTGAAAAAATATCCGTCAACAGGATTCAGGCGAGTG
AATGCACGCTGGTCAATGACCCTCGGAACCGAAGGAATGAAAATAACCTC
CCTGCGCCTATCACCGGCACTGGGACACAAAATGGGCAGACACCGGTCCT
TCAGCGCAGGAGTCAGCTCGACCAGCAATACCTTGCCCTTACATCGCATA
AGTGTGTCTATTAGTTCCTGGTTCCGACTGGCCGATCAGGGCATGTTGCA
ACACGAGATGCTCTGCCGTGGCACGGCTTTTGGTGTACAATTGCCACAAC
GGAAAAGCAAGCATGCCCCGTTGATTTTCTTTACATGCTCTCATGTGGCG
GCGCCTTGGCGTTGGCCCAAGCTATATCCAGTACCTTGGCTGGAGCACGT
GCGGGAGGAGCACTCACGATGTGTGCTGCATGTGACAGAAGTGCAGACAG
GCCGGGTACTAGAACGGTTTTTGATGGATTCGAACGTGGTTCACCATGAT
TCGTTGGATGTTTGTGCTCTTCGGCTACAAGACCAAGAAAAGGTGATGCA
GCGGATGGCGAAGCATGGCTTGCCGTTGCACCCACTGGTCTTGAGCGAGA
GGGTCCCGTCCTCGGGCAACGCAGTCGTGTCCCCCGGTTTCGCCGTGGAG
CGCCTGCAAAGGAAGGCAGATGATGGGAGTTTGAGCGATGGAGAGGATGG
AGAGTACACAGAGGTTGTGGAGGATTTGGAGACCGGAGGATCGGTACGGC
TTGATCTCAGGACGGACCAGGAGCCTCGCCGCTTGTGTGTGAGTCTGGGC
ACGGTCAGCCACTACAAGGACAGGCAAGCTCGGGGGTTTGCCGTCATGGA
CCGTGTGCTGGGGGACGGCGTGTGTGGTGCCCCTTTGTTGGATTTGCGGC
AAGAGGGTCGATGTGTGGGGCTTGTGGAAGGCATAGTGCCCCCTTTGGAG
GACGGGGCGGAGGCCACGCAGACAGGGTCGGGCCTGGCGGGGCGGGAGGT
AGAGCTTCGAAAGGCAATTGCTGGGAATGCCGGTTTTATTTATGGTCAGC
AATTGATTGACTTGCTGGAAAAAGTCAGTGACAATAAATAAGTAAAATCA
GAAATAAAGCAGAATGCTCCTAAGGGTTCTCATCTAATCGTTCTTTCCAG
CCTTGACGATGAAGGGCCGCAGCC back to topprotein sequence of rna4560 >rna4560-protein ID=rna4560-protein|Name=rna4560|organism=Nannochloropsis gaditana|type=polypeptide|length=320bp
MPYAGFESARIEAAEAIGWCRRLLCLTSWCLTTPSHGVRQGYISMTSPGI
RTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVIL
LSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSN
EARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLT
FLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSG
GPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSEL
HAAFIPQFAIREYINSAVIK back to topmRNA from alignment at CM002463.1:914188..915347+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4560 ID=rna4560|Name=rna4560|organism=Nannochloropsis gaditana|type=mRNA|length=1160bp|location=Sequence derived from alignment at CM002463.1:914188..915347+ (Nannochloropsis gaditana)
TTCGGTTCCGAGGGTCATTGACCAGCGTGCATTCACTCGCCTGAATCCTG
TTGACGGATATTTTTTCACGAATAAGATGTGAAGACTCGGAAGTTGGGGA
GTGCCATGCCCTATGCTGGCTTCGAAAGCGCCCGCATCGAAGCAGCAGAA
GCAATAGGATGGTGTCGTCGCCTGCTGTGTTTAACCTCCTGGTGCCTCAC
CACGCCTTCACACGGCGTCCGACAGGGATATATTAGCATGACGAGTCCGG
GAATAAGAACCAAGGCCTCTCATTACCGTACTATTCTGAGTGTATCGTCC
TATTTCAAGCTTCCCGAGCAAGGAATGAAAGATTATGAGCTTCTCAGCCA
GGGAACCGGGTTTTGTTTATCCGGTCCACCAGCTTTGTCTACCAAAGTCA
TCCTTTTAAGTTGCTCGCACGTCCTTGCGCCGTACAGATGGCAGCAATAC
TTCAAAAAGCCCTGGCTTAAATTTGTAAAAGATGAGCACGTTGAAAGAAG
GATTAAGATTTGGACGTATGAGGCGGGAAACCCAGAAGCGGGACGATGGA
GCAACGAAGCAAGAATAGAGGGGACTCCAGCTCACCATAGTTGTCTGGAC
CTGTGTATTATCCCTTTGGAAAATGGTATAGTTGAAACCTGTGCATTGGT
ACCTTACGATGAGAGGGACGACGGAGAAGTAATGATCGAAAAGGAGAATT
TGACATTCCTGGGATTCCCTTCTACCGACACAATCAACATCGACAAGAAG
GCTTGCCTGATGCACATACAAGGAAAGGCGCTTCTATCTTTTTCTGACAC
ACAGGGTCGGACGTATGCCAAGACGAAAGAAAGACTGGTAGTGGGAATGA
GTGGTGGGCCTGTGCTCGACGGCTCTGGACGATTTTGTGGCCTCTTCCAG
GGAATTTTGCCTCCGGCGCCCCGAACgccagaagaggagaggcagCAAGC
CGACGGTGGCCTCGACCCCGTCCTTCGGCCACTACAAATAAGAAATTCAG
AGCTGCACGCAGCTTTCATTCCTCAATTTGCAATTCGAGAGTACATAAAT
AGCGCAGTAATCAAATGAAAATCGTCCAGCAATTTTCGGATACTCGCCAT
TACATTCGTACAGTTACATTTTGAGTATACATTCAGCAGCATAAGAATTT
AATTCTCTCT back to topCoding sequence (CDS) from alignment at CM002463.1:914188..915347+ >rna4560 ID=rna4560|Name=rna4560|organism=Nannochloropsis gaditana|type=CDS|length=963bp|location=Sequence derived from alignment at CM002463.1:914188..915347+ (Nannochloropsis gaditana)
ATGCCCTATGCTGGCTTCGAAAGCGCCCGCATCGAAGCAGCAGAAGCAAT
AGGATGGTGTCGTCGCCTGCTGTGTTTAACCTCCTGGTGCCTCACCACGC
CTTCACACGGCGTCCGACAGGGATATATTAGCATGACGAGTCCGGGAATA
AGAACCAAGGCCTCTCATTACCGTACTATTCTGAGTGTATCGTCCTATTT
CAAGCTTCCCGAGCAAGGAATGAAAGATTATGAGCTTCTCAGCCAGGGAA
CCGGGTTTTGTTTATCCGGTCCACCAGCTTTGTCTACCAAAGTCATCCTT
TTAAGTTGCTCGCACGTCCTTGCGCCGTACAGATGGCAGCAATACTTCAA
AAAGCCCTGGCTTAAATTTGTAAAAGATGAGCACGTTGAAAGAAGGATTA
AGATTTGGACGTATGAGGCGGGAAACCCAGAAGCGGGACGATGGAGCAAC
GAAGCAAGAATAGAGGGGACTCCAGCTCACCATAGTTGTCTGGACCTGTG
TATTATCCCTTTGGAAAATGGTATAGTTGAAACCTGTGCATTGGTACCTT
ACGATGAGAGGGACGACGGAGAAGTAATGATCGAAAAGGAGAATTTGACA
TTCCTGGGATTCCCTTCTACCGACACAATCAACATCGACAAGAAGGCTTG
CCTGATGCACATACAAGGAAAGGCGCTTCTATCTTTTTCTGACACACAGG
GTCGGACGTATGCCAAGACGAAAGAAAGACTGGTAGTGGGAATGAGTGGT
GGGCCTGTGCTCGACGGCTCTGGACGATTTTGTGGCCTCTTCCAGGGAAT
TTTGCCTCCGGCGCCCCGAACgccagaagaggagaggcagCAAGCCGACG
GTGGCCTCGACCCCGTCCTTCGGCCACTACAAATAAGAAATTCAGAGCTG
CACGCAGCTTTCATTCCTCAATTTGCAATTCGAGAGTACATAAATAGCGC
AGTAATCAAATGA back to top
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