EWM26080.1, cds4548 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|585108074|gb|EWM26080.1| (hypothetical protein Naga_100014g38 [Nannochloropsis gaditana]) HSP 1 Score: 666.766 bits (1719), Expect = 0.000e+0 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0 Query: 1 MPYAGFESARIEAAEAIGWCRRLLCLTSWCLTTPSHGVRQGYISMTSPGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINSAVIK 320 MPYAGFESARIEAAEAIGWCRRLLCLTSWCLTTPSHGVRQGYISMTSPGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINSAVIK Sbjct: 1 MPYAGFESARIEAAEAIGWCRRLLCLTSWCLTTPSHGVRQGYISMTSPGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINSAVIK 320
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|553196453|ref|XP_005856346.1| (hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526] >gi|422292700|gb|EKU20002.1| hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 505.753 bits (1301), Expect = 5.136e-180 Identity = 242/244 (99.18%), Postives = 244/244 (100.00%), Query Frame = 0 Query: 48 PGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLR 291 PGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWL+FVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLE+GIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLR Sbjct: 1 PGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLEFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLEDGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLR 244
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|585108112|gb|EWM26118.1| (hypothetical protein Naga_100014g37 [Nannochloropsis gaditana]) HSP 1 Score: 92.0485 bits (227), Expect = 1.586e-17 Identity = 76/284 (26.76%), Postives = 124/284 (43.66%), Query Frame = 0 Query: 33 TPSHGVRQGYISMTSPGIRTKASH---YRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTK--VILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLE-----------------------------NGIVETCALVPYDER----------DDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLD--GSGRFCGLFQGILPP 270 +P+ G + G S G+ + ++ +R +S+SS+F+L +QGM +E+L +GT F + P S +I +CSHV AP+RW + + PWL+ V++EH R + E + GR ++ HH LD+C + L+ N +V V +R +DGE E+L G D + D++ + + + + D Q R +A L G+ G P+LD GR GL +GI+PP Sbjct: 16 SPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEH--SRCVLHVTEV---QTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLD-LRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPP 293
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|673014604|ref|XP_008861263.1| (hypothetical protein H310_00307 [Aphanomyces invadans] >gi|574482861|gb|ETW09852.1| hypothetical protein H310_00307 [Aphanomyces invadans]) HSP 1 Score: 82.4185 bits (202), Expect = 1.180e-14 Identity = 58/216 (26.85%), Postives = 106/216 (49.07%), Query Frame = 0 Query: 58 RTILSVSSYFKLPEQGMKDYELLSQGTGFCL--SGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLM-HIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGR-FCGLFQGILP 269 R +L++++ F+LP +GM+ +E+LS+G+ + +G T V +L+C+HV P+R+ Y+ WL+ V + V+ + + +G A +W E + H DL ++ L++ I+ V + D + E E L F G I +++ A ++ A + T + +A +++ L GM GG GR GL +GI+P Sbjct: 5 RGVLALTTLFRLPHEGMQAFEVLSRGSAMLVHRTGAKRNPTHVHVLTCAHVACPWRYSSYYPHDWLEHVDENFVKHTLALREVGSG---ATKW--EVDLLPHTLVHPTRDLALLELQSSILTNDDSVDPFDLDTAFAVAENEPLEFHGH-----IQLNETAPILPESVAGAYFWLNPTTKQAFASSEKVLAQGMCGGAAFTKQGRKVVGLIEGIVP 210
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|698824833|ref|XP_009845445.1| (hypothetical protein H257_18134 [Aphanomyces astaci] >gi|574099474|gb|ETV65086.1| hypothetical protein H257_18134 [Aphanomyces astaci]) HSP 1 Score: 78.9518 bits (193), Expect = 2.529e-13 Identity = 68/262 (25.95%), Postives = 117/262 (44.66%), Query Frame = 0 Query: 58 RTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVIL--LSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIV-ETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLM-HIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGR-FCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYI 314 R +L++++ F+LP +GM+ +E+LS+G+ + A +L L+C+HV P+R+ Y+ WL+ V + V+ + + +G A W E +E A H DL ++ L++ +V + ++ P+D D + E E L F G D + C+ A + T + +A + L GM GG GR GL +GI+P P + L E H A IP+ + E++ Sbjct: 4 RGVLALTTLFRLPHEGMEAFEVLSRGSAMLVHRTRAKRNPSLLHVLTCAHVACPWRYPAYYPHEWLQHVDEGFVKHTLALREIGSG---ATMW--EVDLEPHTAVHPSRDLALLELKSSVVRDDKSVDPFD-LDTAFSVAESEPLVFDGHVQPD----ETTTCVQPESVAGAYFWLNPTTKQAFASSATVLTQGMCGGAAFTTHGRKVVGLVEGIVPVVENA------------SPAYKTL-----ENHVAIIPRDDLTEFV 238
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|567970307|gb|ETK95348.1| (hypothetical protein L915_01711 [Phytophthora parasitica] >gi|567998674|gb|ETL48739.1| hypothetical protein L916_01683 [Phytophthora parasitica] >gi|568027850|gb|ETM01795.1| hypothetical protein L917_01648 [Phytophthora parasitica] >gi|570336326|gb|ETO84274.1| hypothetical protein F444_01797 [Phytophthora parasitica P1976] >gi|570960369|gb|ETP25348.1| hypothetical protein F441_01759 [Phytophthora parasitica CJ01A1] >gi|570996833|gb|ETP53356.1| hypothetical protein F442_01733 [Phytophthora parasitica P10297] >gi|970656844|gb|KUF94807.1| hypothetical protein AM587_10013283 [Phytophthora nicotianae]) HSP 1 Score: 77.7962 bits (190), Expect = 7.839e-13 Identity = 74/280 (26.43%), Postives = 125/280 (44.64%), Query Frame = 0 Query: 58 RTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKK--PWLKFVKDEHVERRIKIWTYEAGN--PEAGRWSNEARIEGTPAHHSCLDLCIIPLENGI-------------VETCALV-PYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPP---APRTPEEERQQADGGLDPVLRPLQIRNSEL-HAAFIPQFAIREYIN 315 R +LS+++ F LP +GM + LS G+ L + S V+ +C HV P+ + +YF WL+FV ++HV +++ + N PE E + H DL ++ L++ V+T L P ER D V + + L + + I KA H G++ + G+ +A ++E L GM GG V+ +G+ G+ +GI+P PE+ ++A Q+R + H AFIP +R++I Sbjct: 7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHDSTSPSLAVV--TCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSNSRPEV---LLELPLAAQVHTHESRDLALLTLKDSAALGSWQQVEQELGVQTLTLQQPPCERGDAVVFLGHKQL--VSGEEEEGYQI-PKAVTGHFVGRS------SSGQEFAWSQELLEEGMCGGAVVGAAGQCVGVVEGIVPTIVQGDDEPEKHDREAHAA-------WQMRQALAGHVAFIPASDVRKFIE 265
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|566032606|gb|ETI55517.1| (hypothetical protein F443_01796 [Phytophthora parasitica P1569]) HSP 1 Score: 77.7962 bits (190), Expect = 8.641e-13 Identity = 74/280 (26.43%), Postives = 125/280 (44.64%), Query Frame = 0 Query: 58 RTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKK--PWLKFVKDEHVERRIKIWTYEAGN--PEAGRWSNEARIEGTPAHHSCLDLCIIPLENGI-------------VETCALV-PYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPP---APRTPEEERQQADGGLDPVLRPLQIRNSEL-HAAFIPQFAIREYIN 315 R +LS+++ F LP +GM + LS G+ L + S V+ +C HV P+ + +YF WL+FV ++HV +++ + N PE E + H DL ++ L++ V+T L P ER D V + + L + + I KA H G++ + G+ +A ++E L GM GG V+ +G+ G+ +GI+P PE+ ++A Q+R + H AFIP +R++I Sbjct: 7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHDSTSPSLAVV--TCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSNSRPEV---LLELPLAAQVHTHESRDLALLTLKDSAALGSWQQAEQELGVQTLTLQQPPCERGDAVVFLGHKQL--VSGEEEEGYQI-PKAVTGHFVGRS------SSGQEFAWSQELLEEGMCGGAVVGAAGQCVGVVEGIVPTIVQGDDEPEKHDREAHAA-------WQMRQALAGHVAFIPASDVRKFIE 265
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|675180627|ref|XP_008899198.1| (hypothetical protein PPTG_06904 [Phytophthora parasitica INRA-310] >gi|568100987|gb|ETN15677.1| hypothetical protein PPTG_06904 [Phytophthora parasitica INRA-310]) HSP 1 Score: 75.485 bits (184), Expect = 4.510e-12 Identity = 73/280 (26.07%), Postives = 124/280 (44.29%), Query Frame = 0 Query: 58 RTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKK--PWLKFVKDEHVERRIKIWTYEAGN--PEAGRWSNEARIEGTPAHHSCLDLCIIPLENGI-------------VETCALV-PYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPP---APRTPEEERQQADGGLDPVLRPLQIRNSEL-HAAFIPQFAIREYIN 315 R +LS+++ F LP +GM + LS G+ L + S V+ +C HV P+ + +YF WL+FV ++HV +++ + N PE E + H DL ++ L++ V+T L P ER D V + + L + + I KA H G++ + G+ +A ++E L GM GG V+ + + G+ +GI+P PE+ ++A Q+R + H AFIP +R++I Sbjct: 7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHDSTSPSLAVV--TCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSNSRPEVLL---ELPLAAQVHTHESRDLALLTLKDSAALGSWQQVEQELGVQTLTLQQPPCERGDAVVFLGHKQL--VSGEEEEGYQI-PKAVTGHFVGRS------SSGQEFAWSQELLEEGMCGGAVVGAASQCVGVVEGIVPTIVQGDDEPEKHDREAHAA-------WQMRQALAGHVAFIPASDVRKFIE 265
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|831779764|ref|XP_012755822.1| (hypothetical protein SAMD00019534_048780 [Acytostelium subglobosum LB1] >gi|735856454|dbj|GAM21703.1| hypothetical protein SAMD00019534_048780 [Acytostelium subglobosum LB1]) HSP 1 Score: 73.1738 bits (178), Expect = 2.673e-11 Identity = 69/270 (25.56%), Postives = 124/270 (45.93%), Query Frame = 0 Query: 60 ILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVIL-LSCSHVLAPYRWQQYFKKP---WLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYD----ERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMH-IQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINSAVIK 320 +L+VSSYFK P+ G++DY +LS+GT F + P A + I +S +H+ P+ + Q +K P W+ F DE R+++ E + GR + ++ HS LDL PL L PY+ E D +G + +D+KA +M ++ + L+ ++ R + T +G+ GGP ++ + G+ +G++ PR ++ R R L++ +IP ++ +IN+ I+ Sbjct: 2 LLTVSSYFKFPDYGVQDYVVLSRGTAFLVKTPGASQNRPIYGISSAHITHPFNFPQLYKDPSQQWI-FALDES-NIRVQL---EYRDNNTGRILHSVHLDKPFHLHSTLDLVCFPLSLDDFTRKGL-PYNASILELTDNNNNNNDSQHNQIGKLFGYQL-VDEKADIMRPLETEYQLNVVES-NRHFVSTVNPSPMGVCGGPAINSNNEVVGMIEGLVKLDPRV----LSPGTSTVNEATREYYNR-INLNSVYIPSKILKTFINTIDIQ 258
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|1013937619|gb|KYQ91315.1| (hypothetical protein DLAC_11714 [Dictyostelium lacteum]) HSP 1 Score: 70.0922 bits (170), Expect = 5.058e-10 Identity = 62/289 (21.45%), Postives = 127/289 (43.94%), Query Frame = 0 Query: 60 ILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPA-----LSTKVILLSCSHVLAPYRWQQYFKK---PWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCI------------IPLENGIVETCALVPYDERDDG--------EVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAP----RTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINS 316 +LS+SS+F+ PE G+ +Y LS+GT F + P + + + +SC+H+ P+++ +K+ WL + + +++ ++ E + E G+ + ++ H LDL + IP + I+E L PYD +G +++ EKEN+ + +Q F+++ R + T+ +G+ GGPV++ G+ +G++ P +TP ++++ +R + + FIP + +I+S Sbjct: 57 LLSISSFFRYPEGGVNEYANLSKGTAFLVQTPKSGFIGKPNNSIYCISCAHITHPFQFPNLYKEEQYSWLYVLGESNIKAQL-----EYRDDETGKLLHSIPLKPPYYLHPLLDLVVFKVDEDDFKKSNIPYQASIIE---LEPYDFPKEGNPGRLFGYQLVNEKENI------------------MKPMQIDFQFHFAESSERFFLSTESVSPMGVCGGPVVNIENEVIGMVEGLVQIDPTLIDKTPNPKKREF------------LRKTNNNTVFIPSQVLNNFISS 307 The following BLAST results are available for this feature:
BLAST of EWM26080.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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