EWM26080.1, cds4548 (CDS) Nannochloropsis gaditana

Overview
NameEWM26080.1
Unique Namecds4548
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:914293..915255 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26080.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100014g38.9257.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:914293..915255 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR009003Trypsin-like_Pept_dom
Homology
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|585108074|gb|EWM26080.1| (hypothetical protein Naga_100014g38 [Nannochloropsis gaditana])

HSP 1 Score: 666.766 bits (1719), Expect = 0.000e+0
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0
Query:    1 MPYAGFESARIEAAEAIGWCRRLLCLTSWCLTTPSHGVRQGYISMTSPGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINSAVIK 320
            MPYAGFESARIEAAEAIGWCRRLLCLTSWCLTTPSHGVRQGYISMTSPGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINSAVIK
Sbjct:    1 MPYAGFESARIEAAEAIGWCRRLLCLTSWCLTTPSHGVRQGYISMTSPGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINSAVIK 320          
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|553196453|ref|XP_005856346.1| (hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526] >gi|422292700|gb|EKU20002.1| hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 505.753 bits (1301), Expect = 5.136e-180
Identity = 242/244 (99.18%), Postives = 244/244 (100.00%), Query Frame = 0
Query:   48 PGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLR 291
            PGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWL+FVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLE+GIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLR
Sbjct:    1 PGIRTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLEFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLEDGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLR 244          
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|585108112|gb|EWM26118.1| (hypothetical protein Naga_100014g37 [Nannochloropsis gaditana])

HSP 1 Score: 92.0485 bits (227), Expect = 1.586e-17
Identity = 76/284 (26.76%), Postives = 124/284 (43.66%), Query Frame = 0
Query:   33 TPSHGVRQGYISMTSPGIRTKASH---YRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTK--VILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLE-----------------------------NGIVETCALVPYDER----------DDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLD--GSGRFCGLFQGILPP 270
            +P+ G + G     S G+ + ++    +R  +S+SS+F+L +QGM  +E+L +GT F +  P   S    +I  +CSHV AP+RW + +  PWL+ V++EH   R  +   E    + GR      ++    HH  LD+C + L+                             N +V     V   +R          +DGE     E+L   G    D +  D++   + +    +  + D Q R +A     L  G+ G P+LD    GR  GL +GI+PP
Sbjct:   16 SPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEH--SRCVLHVTEV---QTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLD-LRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPP 293          
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|673014604|ref|XP_008861263.1| (hypothetical protein H310_00307 [Aphanomyces invadans] >gi|574482861|gb|ETW09852.1| hypothetical protein H310_00307 [Aphanomyces invadans])

HSP 1 Score: 82.4185 bits (202), Expect = 1.180e-14
Identity = 58/216 (26.85%), Postives = 106/216 (49.07%), Query Frame = 0
Query:   58 RTILSVSSYFKLPEQGMKDYELLSQGTGFCL--SGPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLM-HIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGR-FCGLFQGILP 269
            R +L++++ F+LP +GM+ +E+LS+G+   +  +G     T V +L+C+HV  P+R+  Y+   WL+ V +  V+  + +    +G   A +W  E  +      H   DL ++ L++ I+     V   + D    + E E L F G      I +++ A ++      A    + T  + +A +++ L  GM GG      GR   GL +GI+P
Sbjct:    5 RGVLALTTLFRLPHEGMQAFEVLSRGSAMLVHRTGAKRNPTHVHVLTCAHVACPWRYSSYYPHDWLEHVDENFVKHTLALREVGSG---ATKW--EVDLLPHTLVHPTRDLALLELQSSILTNDDSVDPFDLDTAFAVAENEPLEFHGH-----IQLNETAPILPESVAGAYFWLNPTTKQAFASSEKVLAQGMCGGAAFTKQGRKVVGLIEGIVP 210          
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|698824833|ref|XP_009845445.1| (hypothetical protein H257_18134 [Aphanomyces astaci] >gi|574099474|gb|ETV65086.1| hypothetical protein H257_18134 [Aphanomyces astaci])

HSP 1 Score: 78.9518 bits (193), Expect = 2.529e-13
Identity = 68/262 (25.95%), Postives = 117/262 (44.66%), Query Frame = 0
Query:   58 RTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVIL--LSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIV-ETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLM-HIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGR-FCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYI 314
            R +L++++ F+LP +GM+ +E+LS+G+   +    A     +L  L+C+HV  P+R+  Y+   WL+ V +  V+  + +    +G   A  W  E  +E   A H   DL ++ L++ +V +  ++ P+D  D    + E E L F G    D    +   C+       A    + T  + +A +   L  GM GG      GR   GL +GI+P                  P  + L     E H A IP+  + E++
Sbjct:    4 RGVLALTTLFRLPHEGMEAFEVLSRGSAMLVHRTRAKRNPSLLHVLTCAHVACPWRYPAYYPHEWLQHVDEGFVKHTLALREIGSG---ATMW--EVDLEPHTAVHPSRDLALLELKSSVVRDDKSVDPFD-LDTAFSVAESEPLVFDGHVQPD----ETTTCVQPESVAGAYFWLNPTTKQAFASSATVLTQGMCGGAAFTTHGRKVVGLVEGIVPVVENA------------SPAYKTL-----ENHVAIIPRDDLTEFV 238          
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|567970307|gb|ETK95348.1| (hypothetical protein L915_01711 [Phytophthora parasitica] >gi|567998674|gb|ETL48739.1| hypothetical protein L916_01683 [Phytophthora parasitica] >gi|568027850|gb|ETM01795.1| hypothetical protein L917_01648 [Phytophthora parasitica] >gi|570336326|gb|ETO84274.1| hypothetical protein F444_01797 [Phytophthora parasitica P1976] >gi|570960369|gb|ETP25348.1| hypothetical protein F441_01759 [Phytophthora parasitica CJ01A1] >gi|570996833|gb|ETP53356.1| hypothetical protein F442_01733 [Phytophthora parasitica P10297] >gi|970656844|gb|KUF94807.1| hypothetical protein AM587_10013283 [Phytophthora nicotianae])

HSP 1 Score: 77.7962 bits (190), Expect = 7.839e-13
Identity = 74/280 (26.43%), Postives = 125/280 (44.64%), Query Frame = 0
Query:   58 RTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKK--PWLKFVKDEHVERRIKIWTYEAGN--PEAGRWSNEARIEGTPAHHSCLDLCIIPLENGI-------------VETCALV-PYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPP---APRTPEEERQQADGGLDPVLRPLQIRNSEL-HAAFIPQFAIREYIN 315
            R +LS+++ F LP +GM   + LS G+   L    + S  V+  +C HV  P+ + +YF     WL+FV ++HV   +++   +  N  PE      E  +      H   DL ++ L++               V+T  L  P  ER D  V +  + L  +     +   I  KA   H  G++      + G+ +A ++E L  GM GG V+  +G+  G+ +GI+P        PE+  ++A           Q+R +   H AFIP   +R++I 
Sbjct:    7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHDSTSPSLAVV--TCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSNSRPEV---LLELPLAAQVHTHESRDLALLTLKDSAALGSWQQVEQELGVQTLTLQQPPCERGDAVVFLGHKQL--VSGEEEEGYQI-PKAVTGHFVGRS------SSGQEFAWSQELLEEGMCGGAVVGAAGQCVGVVEGIVPTIVQGDDEPEKHDREAHAA-------WQMRQALAGHVAFIPASDVRKFIE 265          
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|566032606|gb|ETI55517.1| (hypothetical protein F443_01796 [Phytophthora parasitica P1569])

HSP 1 Score: 77.7962 bits (190), Expect = 8.641e-13
Identity = 74/280 (26.43%), Postives = 125/280 (44.64%), Query Frame = 0
Query:   58 RTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKK--PWLKFVKDEHVERRIKIWTYEAGN--PEAGRWSNEARIEGTPAHHSCLDLCIIPLENGI-------------VETCALV-PYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPP---APRTPEEERQQADGGLDPVLRPLQIRNSEL-HAAFIPQFAIREYIN 315
            R +LS+++ F LP +GM   + LS G+   L    + S  V+  +C HV  P+ + +YF     WL+FV ++HV   +++   +  N  PE      E  +      H   DL ++ L++               V+T  L  P  ER D  V +  + L  +     +   I  KA   H  G++      + G+ +A ++E L  GM GG V+  +G+  G+ +GI+P        PE+  ++A           Q+R +   H AFIP   +R++I 
Sbjct:    7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHDSTSPSLAVV--TCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSNSRPEV---LLELPLAAQVHTHESRDLALLTLKDSAALGSWQQAEQELGVQTLTLQQPPCERGDAVVFLGHKQL--VSGEEEEGYQI-PKAVTGHFVGRS------SSGQEFAWSQELLEEGMCGGAVVGAAGQCVGVVEGIVPTIVQGDDEPEKHDREAHAA-------WQMRQALAGHVAFIPASDVRKFIE 265          
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|675180627|ref|XP_008899198.1| (hypothetical protein PPTG_06904 [Phytophthora parasitica INRA-310] >gi|568100987|gb|ETN15677.1| hypothetical protein PPTG_06904 [Phytophthora parasitica INRA-310])

HSP 1 Score: 75.485 bits (184), Expect = 4.510e-12
Identity = 73/280 (26.07%), Postives = 124/280 (44.29%), Query Frame = 0
Query:   58 RTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVILLSCSHVLAPYRWQQYFKK--PWLKFVKDEHVERRIKIWTYEAGN--PEAGRWSNEARIEGTPAHHSCLDLCIIPLENGI-------------VETCALV-PYDERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPP---APRTPEEERQQADGGLDPVLRPLQIRNSEL-HAAFIPQFAIREYIN 315
            R +LS+++ F LP +GM   + LS G+   L    + S  V+  +C HV  P+ + +YF     WL+FV ++HV   +++   +  N  PE      E  +      H   DL ++ L++               V+T  L  P  ER D  V +  + L  +     +   I  KA   H  G++      + G+ +A ++E L  GM GG V+  + +  G+ +GI+P        PE+  ++A           Q+R +   H AFIP   +R++I 
Sbjct:    7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHDSTSPSLAVV--TCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSNSRPEVLL---ELPLAAQVHTHESRDLALLTLKDSAALGSWQQVEQELGVQTLTLQQPPCERGDAVVFLGHKQL--VSGEEEEGYQI-PKAVTGHFVGRS------SSGQEFAWSQELLEEGMCGGAVVGAASQCVGVVEGIVPTIVQGDDEPEKHDREAHAA-------WQMRQALAGHVAFIPASDVRKFIE 265          
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|831779764|ref|XP_012755822.1| (hypothetical protein SAMD00019534_048780 [Acytostelium subglobosum LB1] >gi|735856454|dbj|GAM21703.1| hypothetical protein SAMD00019534_048780 [Acytostelium subglobosum LB1])

HSP 1 Score: 73.1738 bits (178), Expect = 2.673e-11
Identity = 69/270 (25.56%), Postives = 124/270 (45.93%), Query Frame = 0
Query:   60 ILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTKVIL-LSCSHVLAPYRWQQYFKKP---WLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYD----ERDDGEVMIEKENLTFLGFPSTDTINIDKKACLMH-IQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINSAVIK 320
            +L+VSSYFK P+ G++DY +LS+GT F +  P A   + I  +S +H+  P+ + Q +K P   W+ F  DE    R+++   E  +   GR  +   ++     HS LDL   PL         L PY+    E  D            +G      + +D+KA +M  ++ +  L+  ++  R +  T     +G+ GGP ++ +    G+ +G++   PR            ++   R    R   L++ +IP   ++ +IN+  I+
Sbjct:    2 LLTVSSYFKFPDYGVQDYVVLSRGTAFLVKTPGASQNRPIYGISSAHITHPFNFPQLYKDPSQQWI-FALDES-NIRVQL---EYRDNNTGRILHSVHLDKPFHLHSTLDLVCFPLSLDDFTRKGL-PYNASILELTDNNNNNNDSQHNQIGKLFGYQL-VDEKADIMRPLETEYQLNVVES-NRHFVSTVNPSPMGVCGGPAINSNNEVVGMIEGLVKLDPRV----LSPGTSTVNEATREYYNR-INLNSVYIPSKILKTFINTIDIQ 258          
BLAST of EWM26080.1 vs. NCBI_GenBank
Match: gi|1013937619|gb|KYQ91315.1| (hypothetical protein DLAC_11714 [Dictyostelium lacteum])

HSP 1 Score: 70.0922 bits (170), Expect = 5.058e-10
Identity = 62/289 (21.45%), Postives = 127/289 (43.94%), Query Frame = 0
Query:   60 ILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPA-----LSTKVILLSCSHVLAPYRWQQYFKK---PWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCI------------IPLENGIVETCALVPYDERDDG--------EVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAP----RTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINS 316
            +LS+SS+F+ PE G+ +Y  LS+GT F +  P +      +  +  +SC+H+  P+++   +K+    WL  + + +++ ++     E  + E G+  +   ++     H  LDL +            IP +  I+E   L PYD   +G        +++ EKEN+                  +  +Q      F+++  R +  T+    +G+ GGPV++      G+ +G++   P    +TP  ++++             +R +  +  FIP   +  +I+S
Sbjct:   57 LLSISSFFRYPEGGVNEYANLSKGTAFLVQTPKSGFIGKPNNSIYCISCAHITHPFQFPNLYKEEQYSWLYVLGESNIKAQL-----EYRDDETGKLLHSIPLKPPYYLHPLLDLVVFKVDEDDFKKSNIPYQASIIE---LEPYDFPKEGNPGRLFGYQLVNEKENI------------------MKPMQIDFQFHFAESSERFFLSTESVSPMGVCGGPVVNIENEVIGMVEGLVQIDPTLIDKTPNPKKREF------------LRKTNNNTVFIPSQVLNNFISS 307          
The following BLAST results are available for this feature:
BLAST of EWM26080.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108074|gb|EWM26080.1|0.000e+0100.00hypothetical protein Naga_100014g38 [Nannochlorops... [more]
gi|553196453|ref|XP_005856346.1|5.136e-18099.18hypothetical protein NGA_2002400, partial [Nannoch... [more]
gi|585108112|gb|EWM26118.1|1.586e-1726.76hypothetical protein Naga_100014g37 [Nannochlorops... [more]
gi|673014604|ref|XP_008861263.1|1.180e-1426.85hypothetical protein H310_00307 [Aphanomyces invad... [more]
gi|698824833|ref|XP_009845445.1|2.529e-1325.95hypothetical protein H257_18134 [Aphanomyces astac... [more]
gi|567970307|gb|ETK95348.1|7.839e-1326.43hypothetical protein L915_01711 [Phytophthora para... [more]
gi|566032606|gb|ETI55517.1|8.641e-1326.43hypothetical protein F443_01796 [Phytophthora para... [more]
gi|675180627|ref|XP_008899198.1|4.510e-1226.07hypothetical protein PPTG_06904 [Phytophthora para... [more]
gi|831779764|ref|XP_012755822.1|2.673e-1125.56hypothetical protein SAMD00019534_048780 [Acytoste... [more]
gi|1013937619|gb|KYQ91315.1|5.058e-1021.45hypothetical protein DLAC_11714 [Dictyostelium lac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4560rna4560Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications